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The map label for this gene is ssuC [C]

Identifier: 218232052

GI number: 218232052

Start: 762917

End: 763669

Strand: Direct

Name: ssuC [C]

Synonym: BCB4264_A0784

Alternate gene names: 218232052

Gene position: 762917-763669 (Clockwise)

Preceding gene: 218233062

Following gene: 218231271

Centisome position: 14.08

GC content: 36.52

Gene sequence:

>753_bases
ATGAACCGATTGAAAGAATTAGTTCCTGCTATTACACTTTCTAGTATTTTACTAGCTGTGTGGGAAATAGGAGCAAGAAT
TGTAGATGAGATGTACATTTTACCGTCACCTTCTGCGATTTTAATGAAGATATGGAAACTAAAAGACATATTATTTACAG
TTCATTTACCTGCAACGTTATACGTCGTTTTAATAGGTGTTGTTATCTCTATCGTATTAGGTGTAGGGCTAGCGATGTTA
ATGAATGCGAGTACATGGATGGAGAGAGCATTTTATCCATTATTAGTTGCTTCACAAACGATTCCGATTACTGCGCTTGC
TCCGCTATTTGTTTTATGGTTTGGATATACAATTTGGAGTAAGGTTGTTGTCACAGTTTTAATTACGTTTTTCCCAATTG
CGGTCAATACGTATGATGGACTGCGTAGTACGAAAAAAGAATGGGAGGAGCTCTTAGTTACATATGGAGCAACAAAAAGA
GATATTTTTCTTAAATTAAAGTTGCCGTCTGCTCTTCCTTATTTTTTCTCAGCTTTAAAAATTGCAGTTCCGCTTAGTGT
TATCGGAGCAGCAATTGGAGAATGGCTCGGTGCACAAGCTGGGCTTGGATATTTCAGTAAGAGAATGATGACGCAGTTAG
ATGGAGCTGGCGTATTTGCACCTATTGTATTGTTATCATTATTAGCTATTTTCTTCGTCGTAATTATTTCCATATTAGAA
AAGAAATTCATTAGTTGGAGGAAGCATTCATGA

Upstream 100 bases:

>100_bases
CGCTTGATCATAACAGAACACGAAAAGATTTATATAAACCGGAAGTATTAGCGCTGAAAGATGAGCTTCTTAGTATGTTA
CAAAGGCAGGTACTTGTGTG

Downstream 100 bases:

>100_bases
AATTTTTAAAGCGCATCTTTGTGTTTACATTATTAATTGCAATAATTGCAGGATGTTCGAGTAATTCAGCATCAGACAAA
AGTAAAAAAGAGAAAGAAAT

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNRLKELVPAITLSSILLAVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPATLYVVLIGVVISIVLGVGLAML
MNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKR
DIFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVIISILE
KKFISWRKHS

Sequences:

>Translated_250_residues
MNRLKELVPAITLSSILLAVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPATLYVVLIGVVISIVLGVGLAML
MNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKR
DIFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVIISILE
KKFISWRKHS
>Mature_250_residues
MNRLKELVPAITLSSILLAVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPATLYVVLIGVVISIVLGVGLAML
MNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKR
DIFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVIISILE
KKFISWRKHS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=233, Percent_Identity=29.1845493562232, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786564, Length=202, Percent_Identity=23.7623762376238, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27794; Mature: 27794

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLKELVPAITLSSILLAVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPATL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHH
IAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVIISILE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KKFISWRKHS
HHHHHHCCCC
>Mature Secondary Structure
MNRLKELVPAITLSSILLAVWEIGARIVDEMYILPSPSAILMKIWKLKDILFTVHLPATL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YVVLIGVVISIVLGVGLAMLMNASTWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKRDIFLKLKLPSALPYFFSALK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHH
IAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVVIISILE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KKFISWRKHS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]