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The map label for this gene is pepF [H]

Identifier: 218232033

GI number: 218232033

Start: 2767022

End: 2768605

Strand: Reverse

Name: pepF [H]

Synonym: BCB4264_A2885

Alternate gene names: 218232033

Gene position: 2768605-2767022 (Counterclockwise)

Preceding gene: 218231391

Following gene: 218232542

Centisome position: 51.09

GC content: 31.5

Gene sequence:

>1584_bases
ATGCAAGAAAGTGCTAGATGGGATTTAAATCGCTTGTATTTGAATGAGGATATTCTATTTCCGATTTTGGAGTTGAAAGA
GCAATATTTTGTAACAAAAGATGTAGAGATTCTTTCAAAGCTTATACAAGCTATTGAAAAAGCAGAATACTATTTGTACT
GTCGATCGGTTGAAGAAAGTGTTCCATCTGACCTTACTAAATTGACCGTGAAAGTGAAGGAACTAAAAAGTGAATTACAG
CAAGTAATAAAACATAATGAAGTGGAAACTTCAGATAATACTAAGTTAATAAAAGATGAACTTAATGCGTGGGAAAATAT
GTACATACAATTACGGGATAGGATAGAAATAGAGCACAATAATAAACTATTATCCTTTGGACAAGCAAATACTATTGCAA
TGAATAGTGATAATGAAAAGGAAAGATTAGAAGTATTCGATTCATTAACATGTGCTTTACATAAGGAAAAAGAAATCTTT
GCTACTGTATTAAATCAAGTAGGGAGATTGCGTAATGCAAAGAGTAATGAAATAGAAGATAGAGAGATTTTAACACAATC
TTTTCATGCGAATGGCATTTCAGAAACTGTATTATTCCAAATGTGGAATTTGACAGAAGAAAACCTTGATAAATTAGTAA
GTGCTTTAAACGTGTATAAGAAAGGGAAAGCTTCGATTACATGGCATGAACTTATGACAGTAAAGGAAAGTAATGAGGTC
ATGATTCCTTTTTCAGTAGCAGTACAAAACGTTTATGATGCATGTAAGAATATTGATGAAGAATTAGCAGAATTTGCACG
TAATGCGATAGAAAGTGGATGGATAGATGCTGAACCGAGAGAGAATAAACCACCAGGTGGGTTTTGTGCTCCATTTTTCA
GTGAGAAAGAATCGAGAATCTCCATGCGTTATGATGGGAGTATAGATAGTGTAAGAGTGCACGCTCATGAATTAGGACAT
GCTTGGCATTTTTATAATATGAGTTTTGAACAATCTACATCTTTTTTAGATGATTATTTGCCGATGAGTACGGCTGAATC
AGCATCTATTTTCTTTGAAACGGTACTCTTAAATTATCTAATTGAAACAACGGATAGTAAAGATATGAAAAAGGTATTGC
TTAGCTGGAAAATAAGAAATAGTTTTAATTATGTAATGGCAATACGAGCATCGTATCAGTTTGAAAAAACATTTTATGAA
AAATGTAAAGAGGGTCCATTAAGTGCTGATGAAATTGAGAAATTATCTATAATGGCACAAAAAGAAGCTTATGGAAAAGC
TTTAAGTGAATACCAGCCGTTTGTATGGATGAAATATATTCAATTTTATATAGCAGATGTTCCTTTTTACAATTATCCAT
ACACGTTTGGATATTTAGTAAGTTTTAGCTTATTAGAAATAGCTCAAGAAGGTAAAAGTACTTTTCATTCGAAATATAAA
GAGTTCTTACGAGAAACAGGAAAGGCTCCAGTAGAGGAGCTTATGAAAAAACATTTTGAAATAGATATAAGAAATTATGA
ATTTTGGAATAAAGCTTTTATTCAAATTTCTAAAGACATTGATGAATATTTGCAGCTTATATAA

Upstream 100 bases:

>100_bases
ATTTAAATATTTGAAGATATCAAAATTTTGCCATTTCATATATAATTGTGTGGGGAGAAATATCTGTAACTATTTGTAAA
AATAGGAGGCGGCTATAAAA

Downstream 100 bases:

>100_bases
GGGGAGAGTACAGTGGATCAGCAATTTATAAAAGGTATACCTTTTTCAACTTTAGAATATGCAAAAGCTATAAGTTTATT
AAAAGGTTGGTTATATGAAC

Product: peptidase, family M3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MQESARWDLNRLYLNEDILFPILELKEQYFVTKDVEILSKLIQAIEKAEYYLYCRSVEESVPSDLTKLTVKVKELKSELQ
QVIKHNEVETSDNTKLIKDELNAWENMYIQLRDRIEIEHNNKLLSFGQANTIAMNSDNEKERLEVFDSLTCALHKEKEIF
ATVLNQVGRLRNAKSNEIEDREILTQSFHANGISETVLFQMWNLTEENLDKLVSALNVYKKGKASITWHELMTVKESNEV
MIPFSVAVQNVYDACKNIDEELAEFARNAIESGWIDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRVHAHELGH
AWHFYNMSFEQSTSFLDDYLPMSTAESASIFFETVLLNYLIETTDSKDMKKVLLSWKIRNSFNYVMAIRASYQFEKTFYE
KCKEGPLSADEIEKLSIMAQKEAYGKALSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLVSFSLLEIAQEGKSTFHSKYK
EFLRETGKAPVEELMKKHFEIDIRNYEFWNKAFIQISKDIDEYLQLI

Sequences:

>Translated_527_residues
MQESARWDLNRLYLNEDILFPILELKEQYFVTKDVEILSKLIQAIEKAEYYLYCRSVEESVPSDLTKLTVKVKELKSELQ
QVIKHNEVETSDNTKLIKDELNAWENMYIQLRDRIEIEHNNKLLSFGQANTIAMNSDNEKERLEVFDSLTCALHKEKEIF
ATVLNQVGRLRNAKSNEIEDREILTQSFHANGISETVLFQMWNLTEENLDKLVSALNVYKKGKASITWHELMTVKESNEV
MIPFSVAVQNVYDACKNIDEELAEFARNAIESGWIDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRVHAHELGH
AWHFYNMSFEQSTSFLDDYLPMSTAESASIFFETVLLNYLIETTDSKDMKKVLLSWKIRNSFNYVMAIRASYQFEKTFYE
KCKEGPLSADEIEKLSIMAQKEAYGKALSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLVSFSLLEIAQEGKSTFHSKYK
EFLRETGKAPVEELMKKHFEIDIRNYEFWNKAFIQISKDIDEYLQLI
>Mature_527_residues
MQESARWDLNRLYLNEDILFPILELKEQYFVTKDVEILSKLIQAIEKAEYYLYCRSVEESVPSDLTKLTVKVKELKSELQ
QVIKHNEVETSDNTKLIKDELNAWENMYIQLRDRIEIEHNNKLLSFGQANTIAMNSDNEKERLEVFDSLTCALHKEKEIF
ATVLNQVGRLRNAKSNEIEDREILTQSFHANGISETVLFQMWNLTEENLDKLVSALNVYKKGKASITWHELMTVKESNEV
MIPFSVAVQNVYDACKNIDEELAEFARNAIESGWIDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRVHAHELGH
AWHFYNMSFEQSTSFLDDYLPMSTAESASIFFETVLLNYLIETTDSKDMKKVLLSWKIRNSFNYVMAIRASYQFEKTFYE
KCKEGPLSADEIEKLSIMAQKEAYGKALSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLVSFSLLEIAQEGKSTFHSKYK
EFLRETGKAPVEELMKKHFEIDIRNYEFWNKAFIQISKDIDEYLQLI

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 61727; Mature: 61727

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESARWDLNRLYLNEDILFPILELKEQYFVTKDVEILSKLIQAIEKAEYYLYCRSVEES
CCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHH
VPSDLTKLTVKVKELKSELQQVIKHNEVETSDNTKLIKDELNAWENMYIQLRDRIEIEHN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECC
NKLLSFGQANTIAMNSDNEKERLEVFDSLTCALHKEKEIFATVLNQVGRLRNAKSNEIED
CCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILTQSFHANGISETVLFQMWNLTEENLDKLVSALNVYKKGKASITWHELMTVKESNEV
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHEEECCCCE
MIPFSVAVQNVYDACKNIDEELAEFARNAIESGWIDAEPRENKPPGGFCAPFFSEKESRI
EEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE
SMRYDGSIDSVRVHAHELGHAWHFYNMSFEQSTSFLDDYLPMSTAESASIFFETVLLNYL
EEEECCCCCCEEEHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IETTDSKDMKKVLLSWKIRNSFNYVMAIRASYQFEKTFYEKCKEGPLSADEIEKLSIMAQ
HHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KEAYGKALSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLVSFSLLEIAQEGKSTFHSKYK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELMKKHFEIDIRNYEFWNKAFIQISKDIDEYLQLI
HHHHHCCCCHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQESARWDLNRLYLNEDILFPILELKEQYFVTKDVEILSKLIQAIEKAEYYLYCRSVEES
CCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHH
VPSDLTKLTVKVKELKSELQQVIKHNEVETSDNTKLIKDELNAWENMYIQLRDRIEIEHN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECC
NKLLSFGQANTIAMNSDNEKERLEVFDSLTCALHKEKEIFATVLNQVGRLRNAKSNEIED
CCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILTQSFHANGISETVLFQMWNLTEENLDKLVSALNVYKKGKASITWHELMTVKESNEV
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHEEECCCCE
MIPFSVAVQNVYDACKNIDEELAEFARNAIESGWIDAEPRENKPPGGFCAPFFSEKESRI
EEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE
SMRYDGSIDSVRVHAHELGHAWHFYNMSFEQSTSFLDDYLPMSTAESASIFFETVLLNYL
EEEECCCCCCEEEHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IETTDSKDMKKVLLSWKIRNSFNYVMAIRASYQFEKTFYEKCKEGPLSADEIEKLSIMAQ
HHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KEAYGKALSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLVSFSLLEIAQEGKSTFHSKYK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELMKKHFEIDIRNYEFWNKAFIQISKDIDEYLQLI
HHHHHCCCCHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]