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The map label for this gene is ytaB [H]

Identifier: 218231918

GI number: 218231918

Start: 3045834

End: 3046289

Strand: Reverse

Name: ytaB [H]

Synonym: BCB4264_A3164

Alternate gene names: 218231918

Gene position: 3046289-3045834 (Counterclockwise)

Preceding gene: 218231250

Following gene: 218232513

Centisome position: 56.21

GC content: 30.04

Gene sequence:

>456_bases
ATGAAAAAATCTAGTATTATAGTATTTTTACTAACATATGGTTTGTTTTATGTTTCTAGTGTTTTATTCCCTATTGATCG
TACTTGGTATGATGCGTTAGAAAAGCCGTCTTGGACACCTCCTGGTATGACAATCGGAATGATATGGGCTGTATTATTTG
GACTTATTGCATTATCAGTAGCAATTATTTACAACAACTATGGATTTAAGCCAAAAACATTTTGGTTTTTATTCCTTTTA
AATTATATATTCAATCAAGCGTTCAGCTATTTTCAATTTAGCCAAAAGAATTTGTTTTTAGCAACAATAGATTGTTTACT
AGTCGCTATTACTACGTTGCTTCTCATAGCGGTTTCTTCCAATTTATCTAAAGTATCGACATGGTTGCTAATTCCATATT
TTTTATGGACTGCATTTGCTACATATTTATCTTGGACCATTTATAGTATAAATTAA

Upstream 100 bases:

>100_bases
TGAAATAGGTTAAACAATATGTATTTAGAATATTATCCATTATAAGGACATACTAATCATATAAAGTTTCTATAATCTTC
TAGTAAAAAGGAGAATGTTT

Downstream 100 bases:

>100_bases
AGGCGTAAATAAAAACTTGAGCATAATAAAAATGCTCGAGTTTTTATGTGTGTTAATGATAATCCGAAATATGGAATATA
TACATCTTAGGGAGGTCATC

Product: TspO/MBR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKSSIIVFLLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFKPKTFWFLFLL
NYIFNQAFSYFQFSQKNLFLATIDCLLVAITTLLLIAVSSNLSKVSTWLLIPYFLWTAFATYLSWTIYSIN

Sequences:

>Translated_151_residues
MKKSSIIVFLLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFKPKTFWFLFLL
NYIFNQAFSYFQFSQKNLFLATIDCLLVAITTLLLIAVSSNLSKVSTWLLIPYFLWTAFATYLSWTIYSIN
>Mature_151_residues
MKKSSIIVFLLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFKPKTFWFLFLL
NYIFNQAFSYFQFSQKNLFLATIDCLLVAITTLLLIAVSSNLSKVSTWLLIPYFLWTAFATYLSWTIYSIN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 17473; Mature: 17473

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSIIVFLLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSV
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AIIYNNYGFKPKTFWFLFLLNYIFNQAFSYFQFSQKNLFLATIDCLLVAITTLLLIAVSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
NLSKVSTWLLIPYFLWTAFATYLSWTIYSIN
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKKSSIIVFLLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSV
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AIIYNNYGFKPKTFWFLFLLNYIFNQAFSYFQFSQKNLFLATIDCLLVAITTLLLIAVSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
NLSKVSTWLLIPYFLWTAFATYLSWTIYSIN
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]