Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 218231409

GI number: 218231409

Start: 1469735

End: 1470349

Strand: Direct

Name: yebA [C]

Synonym: BCB4264_A1534

Alternate gene names: 218231409

Gene position: 1469735-1470349 (Clockwise)

Preceding gene: 218231992

Following gene: 218234963

Centisome position: 27.12

GC content: 35.77

Gene sequence:

>615_bases
ATGAAAGTTTTAAAATGCGGTGTCATGTTATTGAGTATACTGTTTGTATCTCAATTACATGTTTATGCAGAAGAAAATCG
ATGGACATGGCCTGTTGAAGGTCAGATAAGTGATTATTTTGGGACAAGGCATGGAAAACATTATGGTATTGATGTAGCTG
CGCCGATTGGAACGCCTGTGGCAGCTATCCAAGATGGTAAGGTAACGAGGTCTTATTATTCAAGTAGTTATGGAAATGTT
GTATTTATTAAACACGGAGAATATGAGGCTGTATATGCACATTTAAATAAGAGATATGTGGATCAAGGAGATTATATTTC
CAAAGGAGAAAAAATTGGAGAAGTAGGGAACACGGGAGAATCGCGAGGTGCGCACTTACATCTAGAACTTCATCAAGGAA
GATGGACGATGGCGAAAAAGAATGCGATGAACCCATTGCTTGTTTTAAGTGAACAAAGAAATGAAGTTGTTTCTTCGTCA
TTATATGTCGTACAAAAAGGGGATACTTTAGTTAGTATTGCACGGAAATTTAGTATGACACTTAAGGAAATTAAAGAAAA
AAATGGATTGCAGCAAGAGCTAATTTATCCTAATCAACAATTATATGTTAAGTAA

Upstream 100 bases:

>100_bases
GAAGGAAGTGGAGTAATTCACTTTCTTTTTTTGTATACTTTTTTCTGTAATATACCAAAATAGAGAAGGTATGGTGGTAA
TTAGAAAACGGAGGATGTAT

Downstream 100 bases:

>100_bases
AGGAAACGCTTCGAAAATTAAACTTTGAACAAATTTATGTTCTTCTTAAATAAGGTTCAATGTAAATGAAATTATATGGG
CGCTTTTGCTAGAACTATTG

Product: peptidase, M23/M37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPVAAIQDGKVTRSYYSSSYGNV
VFIKHGEYEAVYAHLNKRYVDQGDYISKGEKIGEVGNTGESRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSS
LYVVQKGDTLVSIARKFSMTLKEIKEKNGLQQELIYPNQQLYVK

Sequences:

>Translated_204_residues
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPVAAIQDGKVTRSYYSSSYGNV
VFIKHGEYEAVYAHLNKRYVDQGDYISKGEKIGEVGNTGESRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSS
LYVVQKGDTLVSIARKFSMTLKEIKEKNGLQQELIYPNQQLYVK
>Mature_204_residues
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPVAAIQDGKVTRSYYSSSYGNV
VFIKHGEYEAVYAHLNKRYVDQGDYISKGEKIGEVGNTGESRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSS
LYVVQKGDTLVSIARKFSMTLKEIKEKNGLQQELIYPNQQLYVK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=121, Percent_Identity=38.8429752066116, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082174, Length=129, Percent_Identity=34.1085271317829, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789099, Length=127, Percent_Identity=33.8582677165354, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 23052; Mature: 23052

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPV
CCHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCHHHHHCCCCCCEECEEEECCCCCCE
AAIQDGKVTRSYYSSSYGNVVFIKHGEYEAVYAHLNKRYVDQGDYISKGEKIGEVGNTGE
EEECCCCEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHCCCHHCCCCCCCC
SRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSSLYVVQKGDTLVSIARKFSMT
CCCCEEEEEEECCEEEEHHHCCCCEEEEEECHHHHHHHCEEEEEECCCHHHHHHHHHHHH
LKEIKEKNGLQQELIYPNQQLYVK
HHHHHHHCCCHHHHCCCCCEEEEC
>Mature Secondary Structure
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPV
CCHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCHHHHHCCCCCCEECEEEECCCCCCE
AAIQDGKVTRSYYSSSYGNVVFIKHGEYEAVYAHLNKRYVDQGDYISKGEKIGEVGNTGE
EEECCCCEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHCCCHHCCCCCCCC
SRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSSLYVVQKGDTLVSIARKFSMT
CCCCEEEEEEECCEEEEHHHCCCCEEEEEECHHHHHHHCEEEEEECCCHHHHHHHHHHHH
LKEIKEKNGLQQELIYPNQQLYVK
HHHHHHHCCCHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]