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The map label for this gene is fliR [H]

Identifier: 218231299

GI number: 218231299

Start: 1647157

End: 1647918

Strand: Direct

Name: fliR [H]

Synonym: BCB4264_A1734

Alternate gene names: 218231299

Gene position: 1647157-1647918 (Clockwise)

Preceding gene: 218233470

Following gene: 218233750

Centisome position: 30.4

GC content: 35.17

Gene sequence:

>762_bases
ATGAATATGGAATTATGGGCGGCAACGTTTTTTGCGTTTTGTCGCATTACTTCATTTTTATATTTTTTACCGTTTTTCTC
AGGCCGATCCATTCCAGCAATGGCGAAGGTTACTGTTGGACTTGCTCTTTCAATTACAGTGGCTGATCAAGTAGATGTCT
CTCACATCAAGACAGTTTGGGACGTTGCAGCTTATGCAGGAACGCAAATTGTAATTGGATTATCACTTTCAAAAATTGTA
GAAATGCTGTGGAACATTCCGAAAATGGCCGGGCATATTTTAGACTTTGATATCGGTTTATCACAAGCAAGTTTGTTTGA
TGTAAATGCGGGCTCACAGTCTACTTTACTATCAACCATTTTTGATATATTTTTTCTCATTATTTTTATTTCACTTGGCG
GCATTAATTATTTCGTTGCCACGATTTTAAAGTCGTTTCAATATACAGAGGCGATTTCAAAATTGCTGACGACTAGTTTC
TTAGATAGTCTACTCGCAACGCTATTATTTGCGATCACATCAGCGGTTGAAATTGCTCTTCCGCTTATGGGAAGTTTATT
CATCATTAACTTTGTTCTAATTTTAATTGCAAAAAACGCTCCGCAATTAAACGTTTTTATGAATGCATACGTAATTAAAA
TTACATGTGGTATTTTGTTTATTGCGATGAGTGTACCGATGCTCGGTTATGTGTTTAAAAATATGACGGATGTATTACTT
GAAGAATATACGAAACTATTTAACTTTTTCTTAACGAAGTAG

Upstream 100 bases:

>100_bases
TTTAGGTCCGTGGATGTTCCAAGAGTTAACGATGCTTATTTTAGATTTATTTGATAAAATCCCATCGCTATTGCGTTCGT
ACTAAGATAGGTGAACTGAA

Downstream 100 bases:

>100_bases
GGGGACGCGCATGGCAAAGGATAATAAAACAGAAAAGGCCACCCCGCAGAAGCGTAAAAAATCGCGTGAAGAAGGGAATA
TTGCCCGGAGTAAAGATTTA

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNMELWAATFFAFCRITSFLYFLPFFSGRSIPAMAKVTVGLALSITVADQVDVSHIKTVWDVAAYAGTQIVIGLSLSKIV
EMLWNIPKMAGHILDFDIGLSQASLFDVNAGSQSTLLSTIFDIFFLIIFISLGGINYFVATILKSFQYTEAISKLLTTSF
LDSLLATLLFAITSAVEIALPLMGSLFIINFVLILIAKNAPQLNVFMNAYVIKITCGILFIAMSVPMLGYVFKNMTDVLL
EEYTKLFNFFLTK

Sequences:

>Translated_253_residues
MNMELWAATFFAFCRITSFLYFLPFFSGRSIPAMAKVTVGLALSITVADQVDVSHIKTVWDVAAYAGTQIVIGLSLSKIV
EMLWNIPKMAGHILDFDIGLSQASLFDVNAGSQSTLLSTIFDIFFLIIFISLGGINYFVATILKSFQYTEAISKLLTTSF
LDSLLATLLFAITSAVEIALPLMGSLFIINFVLILIAKNAPQLNVFMNAYVIKITCGILFIAMSVPMLGYVFKNMTDVLL
EEYTKLFNFFLTK
>Mature_253_residues
MNMELWAATFFAFCRITSFLYFLPFFSGRSIPAMAKVTVGLALSITVADQVDVSHIKTVWDVAAYAGTQIVIGLSLSKIV
EMLWNIPKMAGHILDFDIGLSQASLFDVNAGSQSTLLSTIFDIFFLIIFISLGGINYFVATILKSFQYTEAISKLLTTSF
LDSLLATLLFAITSAVEIALPLMGSLFIINFVLILIAKNAPQLNVFMNAYVIKITCGILFIAMSVPMLGYVFKNMTDVLL
EEYTKLFNFFLTK

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28011; Mature: 28011

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMELWAATFFAFCRITSFLYFLPFFSGRSIPAMAKVTVGLALSITVADQVDVSHIKTVW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHH
DVAAYAGTQIVIGLSLSKIVEMLWNIPKMAGHILDFDIGLSQASLFDVNAGSQSTLLSTI
HHHHHCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHH
FDIFFLIIFISLGGINYFVATILKSFQYTEAISKLLTTSFLDSLLATLLFAITSAVEIAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLMGSLFIINFVLILIAKNAPQLNVFMNAYVIKITCGILFIAMSVPMLGYVFKNMTDVLL
HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEYTKLFNFFLTK
HHHHHHHHHHHCC
>Mature Secondary Structure
MNMELWAATFFAFCRITSFLYFLPFFSGRSIPAMAKVTVGLALSITVADQVDVSHIKTVW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHH
DVAAYAGTQIVIGLSLSKIVEMLWNIPKMAGHILDFDIGLSQASLFDVNAGSQSTLLSTI
HHHHHCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHH
FDIFFLIIFISLGGINYFVATILKSFQYTEAISKLLTTSFLDSLLATLLFAITSAVEIAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLMGSLFIINFVLILIAKNAPQLNVFMNAYVIKITCGILFIAMSVPMLGYVFKNMTDVLL
HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEYTKLFNFFLTK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]