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The map label for this gene is ydfK [H]

Identifier: 218231288

GI number: 218231288

Start: 1764162

End: 1764878

Strand: Direct

Name: ydfK [H]

Synonym: BCB4264_A1857

Alternate gene names: 218231288

Gene position: 1764162-1764878 (Clockwise)

Preceding gene: 218232474

Following gene: 218231928

Centisome position: 32.55

GC content: 34.73

Gene sequence:

>717_bases
ATGGTTATATTAGGAGCAGTTGTAAATGGAATTTGTATTATATTTGGTACTTTACTTGGTAAATTATTTAGTAGGATTCC
AAAAAGTATGAAAGGGACGATAATGCACGCAATCGGTTTAGCGGTTACTGTGCTTGGGCTTCAAATGGCATTAAAAAGTG
AAAACTTTCTTGTTGTCATACTGAGTTTAGTGATTGGTACGGTAATTGGAGAATGGTTACAATTAGAAGAAAAGTTAAAA
CATTTAGGGGATTGGCTAGAAAATAAAGTTGGATCGAAAGGGAAAGGTAGCATATCAGAAGGTTTTGTAACAGCTACTTT
AATTTTTGCAATTGGCGCGATGGGGATACTTGGTGCACTTGACAGTGGGATTCGCGGAAATCATGATATTTTATTTACAA
AGGCGATTATCGATGGATTTATTTCTATTATATTAACGACAACTCTAGGAATTGGCGTAGTATTTTCGGCGATTCCAGTT
GTTTTATATGAAGGTGGTATTGCAGTTTTTGCAACACAAATTAATAGTTTTGTCCCGAAAGAATTAATGAACCAATTTAT
AGTGGAGATGACGGCTACGGGCGGCATTATGATATCTGCTATTGGATTGAACTTGCTTAGTATTATTAAAATCAAGGTGG
CAAATTTACTTCCAGGTATATTGGTAGTGGGTGTAATTGTTTCAATTATTTATGGTTACGGTTTGTTAGTAAATTAG

Upstream 100 bases:

>100_bases
TGTTAATATTCTCAATATTAAGTTAACATATAGATGACCTGTAAATCAATGTATAAACCAAAATATAGAAATAAAGAATT
CGAAGGGTGAAGAATGAGAA

Downstream 100 bases:

>100_bases
TAGAGGATGGAAATACATATGAAGGAATTTCAATTTACAAAACGTGTGCATAAAATATTGGAGATTGCAACAAAAGAGAG
TGAGTATAACATAATTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVILGAVVNGICIIFGTLLGKLFSRIPKSMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEEKLK
HLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
VLYEGGIAVFATQINSFVPKELMNQFIVEMTATGGIMISAIGLNLLSIIKIKVANLLPGILVVGVIVSIIYGYGLLVN

Sequences:

>Translated_238_residues
MVILGAVVNGICIIFGTLLGKLFSRIPKSMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEEKLK
HLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
VLYEGGIAVFATQINSFVPKELMNQFIVEMTATGGIMISAIGLNLLSIIKIKVANLLPGILVVGVIVSIIYGYGLLVN
>Mature_238_residues
MVILGAVVNGICIIFGTLLGKLFSRIPKSMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEEKLK
HLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
VLYEGGIAVFATQINSFVPKELMNQFIVEMTATGGIMISAIGLNLLSIIKIKVANLLPGILVVGVIVSIIYGYGLLVN

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=167, Percent_Identity=26.3473053892216, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 25035; Mature: 25035

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILGAVVNGICIIFGTLLGKLFSRIPKSMKGTIMHAIGLAVTVLGLQMALKSENFLVVI
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSLVIGTVIGEWLQLEEKLKHLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVVLYEGGIAVFATQINSFVPK
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
ELMNQFIVEMTATGGIMISAIGLNLLSIIKIKVANLLPGILVVGVIVSIIYGYGLLVN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVILGAVVNGICIIFGTLLGKLFSRIPKSMKGTIMHAIGLAVTVLGLQMALKSENFLVVI
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSLVIGTVIGEWLQLEEKLKHLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVVLYEGGIAVFATQINSFVPK
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
ELMNQFIVEMTATGGIMISAIGLNLLSIIKIKVANLLPGILVVGVIVSIIYGYGLLVN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]