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The map label for this gene is 218231105

Identifier: 218231105

GI number: 218231105

Start: 3459574

End: 3461157

Strand: Reverse

Name: 218231105

Synonym: BCB4264_A3565

Alternate gene names: NA

Gene position: 3461157-3459574 (Counterclockwise)

Preceding gene: 218232934

Following gene: 218232502

Centisome position: 63.87

GC content: 36.17

Gene sequence:

>1584_bases
TTGTTAAACAAACATACAACGAGTATGATGTCCATGCTTCCTCAATGGATGAAGATGGCCAAAGATCCGAAATCGATAGG
GGCCTTATTTTTAGATGCATTTGGTGTTGAATTATCAGAGATTGAACGTTACATAGAGCAAGCTTGGAACAACATGTACA
TCGGTACAGCAAACTTACAAACAGCCGATTACTGCTATAAGATTCCGCTTGCTACTCGTGACGTTGTGGATGTTGAAACA
CCAGATCTTCACGTTCGTTTAGTTATTGATGGTGTAAAAAGAGATTGTATGCCAGTTGATACTTTGCGAATATTTTTTGA
AAGTGACGACAACTCCTACATGATTGATACTATCGAAGGTTATGTGTATATCAAAGTAATGGATTACTATATGAAGGATA
ATATCTTCAAACCATTCGATGCAATTGAGGTAGGAGATACTCTTCATTATGAATATATGCTTCATCATATCTGGAACGTA
TTTGACGAGTTTGGTATGTTGTTAGGTATTTCTAGATTACCAGGTGAAAGAAACGAAGACTTTAAGAATCGTATCTTAGA
TGTCTTTAAGAATCCTGGTGGAGCAACAAAGAAAGGGATTATTAATGGTATTAGTAGAGAACTTGGCATTGATAAATCTC
AAGTTGAATTAGGCTCGCTATCTGATGATAAGTATGTTCAAACAAAACTTATGAATACAGATGGGACACCTTCTCAAACA
TATATCCAATACGTAAATCAGATTAATAGCAATCTAGGTTTCTCTTGGGATCATATGAACTGGGGAGAAGCTTATTGGCG
TAGTATTGAAGAAAACAATATGGGGTTTCATTATCTACCTCATATCTGGGATGGTTTCTCTGCTTCATGGAAAGATAACG
AAGTACAATCAGGTATTGGTAGCGGTGACGATTTATTAGTAACTGCTCCAAAAGAAGAGTCTTCTGTTCGAGAATTCAAA
GCTTATGTTGGACTACATGGAACAGAGGAACAAATTGAAGAGAATCACCCAGAAATCCAATTCAAATACAAGATAGTTGC
TAAAGGAAAAATACCAAATGATGAGTATGATTTAGAGGATTATAAATATACAGTAATGGCTTCTGAAATTATTCCGCTTC
ATTACGTATTAGTAGCTTTACGTGAATTCCTATATCAAACTCATATCACTTGGGACAATCGTTATGGTTATACATTTAGT
GACAATACGTCCCCTGGTATGGAAATCGTTACCGGGGAAGATGCTCTTCATAATAATGAGGAGCCACAAATTAAAATTCA
TGTAGATATGAAAACTGCTGATAGAACAGTGACACCTGTTTTAGAAGAGCTTATAGTGGATTGGACCGATCAGAATGATA
CGCCTCAGTCTTACAAATTAACAACAGATGAAGACTTTACTCTAAATAATACAATGACCCAAACGACGTTAGCTGATGTA
GAAGTAGACAGCGGTTCTGTAACTCTTGGTAAAGGTTCATTCTCTGCCGTTATAGATACAGAGGGATCATTCTCAAGAGG
ATCACAAGGTATATCAGTAAGAGTTAACCGAGAAGGTTCTTTATCTCTTAATCTACCAAATTAA

Upstream 100 bases:

>100_bases
TGTCGGTGAAAAAGAGTACTTCATTAAGAATGTAGAACCTTCATTAGAAGAACGATACTTCTTAAGAAAAATTAACGTAG
CATAGAAAGTAGGTGGCACA

Downstream 100 bases:

>100_bases
CAAGGAGTGGATAAAATATGGCTGAAACTGGCTCAGTACAAAACGCAGTTGGGAATAATGTTTACCCAGATTTAGTTCTT
ACTCGTTTCCCAGAATTATT

Product: low copy number virion structural protein, putative

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MLNKHTTSMMSMLPQWMKMAKDPKSIGALFLDAFGVELSEIERYIEQAWNNMYIGTANLQTADYCYKIPLATRDVVDVET
PDLHVRLVIDGVKRDCMPVDTLRIFFESDDNSYMIDTIEGYVYIKVMDYYMKDNIFKPFDAIEVGDTLHYEYMLHHIWNV
FDEFGMLLGISRLPGERNEDFKNRILDVFKNPGGATKKGIINGISRELGIDKSQVELGSLSDDKYVQTKLMNTDGTPSQT
YIQYVNQINSNLGFSWDHMNWGEAYWRSIEENNMGFHYLPHIWDGFSASWKDNEVQSGIGSGDDLLVTAPKEESSVREFK
AYVGLHGTEEQIEENHPEIQFKYKIVAKGKIPNDEYDLEDYKYTVMASEIIPLHYVLVALREFLYQTHITWDNRYGYTFS
DNTSPGMEIVTGEDALHNNEEPQIKIHVDMKTADRTVTPVLEELIVDWTDQNDTPQSYKLTTDEDFTLNNTMTQTTLADV
EVDSGSVTLGKGSFSAVIDTEGSFSRGSQGISVRVNREGSLSLNLPN

Sequences:

>Translated_527_residues
MLNKHTTSMMSMLPQWMKMAKDPKSIGALFLDAFGVELSEIERYIEQAWNNMYIGTANLQTADYCYKIPLATRDVVDVET
PDLHVRLVIDGVKRDCMPVDTLRIFFESDDNSYMIDTIEGYVYIKVMDYYMKDNIFKPFDAIEVGDTLHYEYMLHHIWNV
FDEFGMLLGISRLPGERNEDFKNRILDVFKNPGGATKKGIINGISRELGIDKSQVELGSLSDDKYVQTKLMNTDGTPSQT
YIQYVNQINSNLGFSWDHMNWGEAYWRSIEENNMGFHYLPHIWDGFSASWKDNEVQSGIGSGDDLLVTAPKEESSVREFK
AYVGLHGTEEQIEENHPEIQFKYKIVAKGKIPNDEYDLEDYKYTVMASEIIPLHYVLVALREFLYQTHITWDNRYGYTFS
DNTSPGMEIVTGEDALHNNEEPQIKIHVDMKTADRTVTPVLEELIVDWTDQNDTPQSYKLTTDEDFTLNNTMTQTTLADV
EVDSGSVTLGKGSFSAVIDTEGSFSRGSQGISVRVNREGSLSLNLPN
>Mature_527_residues
MLNKHTTSMMSMLPQWMKMAKDPKSIGALFLDAFGVELSEIERYIEQAWNNMYIGTANLQTADYCYKIPLATRDVVDVET
PDLHVRLVIDGVKRDCMPVDTLRIFFESDDNSYMIDTIEGYVYIKVMDYYMKDNIFKPFDAIEVGDTLHYEYMLHHIWNV
FDEFGMLLGISRLPGERNEDFKNRILDVFKNPGGATKKGIINGISRELGIDKSQVELGSLSDDKYVQTKLMNTDGTPSQT
YIQYVNQINSNLGFSWDHMNWGEAYWRSIEENNMGFHYLPHIWDGFSASWKDNEVQSGIGSGDDLLVTAPKEESSVREFK
AYVGLHGTEEQIEENHPEIQFKYKIVAKGKIPNDEYDLEDYKYTVMASEIIPLHYVLVALREFLYQTHITWDNRYGYTFS
DNTSPGMEIVTGEDALHNNEEPQIKIHVDMKTADRTVTPVLEELIVDWTDQNDTPQSYKLTTDEDFTLNNTMTQTTLADV
EVDSGSVTLGKGSFSAVIDTEGSFSRGSQGISVRVNREGSLSLNLPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60196; Mature: 60196

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKHTTSMMSMLPQWMKMAKDPKSIGALFLDAFGVELSEIERYIEQAWNNMYIGTANLQ
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCC
TADYCYKIPLATRDVVDVETPDLHVRLVIDGVKRDCMPVDTLRIFFESDDNSYMIDTIEG
CCCEEEECCCCCCCEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEECC
YVYIKVMDYYMKDNIFKPFDAIEVGDTLHYEYMLHHIWNVFDEFGMLLGISRLPGERNED
EEEEEEEEEHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FKNRILDVFKNPGGATKKGIINGISRELGIDKSQVELGSLSDDKYVQTKLMNTDGTPSQT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCEEEEEEECCCCCCHHH
YIQYVNQINSNLGFSWDHMNWGEAYWRSIEENNMGFHYLPHIWDGFSASWKDNEVQSGIG
HHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCHHHHCCC
SGDDLLVTAPKEESSVREFKAYVGLHGTEEQIEENHPEIQFKYKIVAKGKIPNDEYDLED
CCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCC
YKYTVMASEIIPLHYVLVALREFLYQTHITWDNRYGYTFSDNTSPGMEIVTGEDALHNNE
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEECCCCCCCCEEEECCHHHCCCC
EPQIKIHVDMKTADRTVTPVLEELIVDWTDQNDTPQSYKLTTDEDFTLNNTMTQTTLADV
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCEEEEEEEEE
EVDSGSVTLGKGSFSAVIDTEGSFSRGSQGISVRVNREGSLSLNLPN
EECCCCEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCC
>Mature Secondary Structure
MLNKHTTSMMSMLPQWMKMAKDPKSIGALFLDAFGVELSEIERYIEQAWNNMYIGTANLQ
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCC
TADYCYKIPLATRDVVDVETPDLHVRLVIDGVKRDCMPVDTLRIFFESDDNSYMIDTIEG
CCCEEEECCCCCCCEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEECC
YVYIKVMDYYMKDNIFKPFDAIEVGDTLHYEYMLHHIWNVFDEFGMLLGISRLPGERNED
EEEEEEEEEHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FKNRILDVFKNPGGATKKGIINGISRELGIDKSQVELGSLSDDKYVQTKLMNTDGTPSQT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCEEEEEEECCCCCCHHH
YIQYVNQINSNLGFSWDHMNWGEAYWRSIEENNMGFHYLPHIWDGFSASWKDNEVQSGIG
HHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCHHHHCCC
SGDDLLVTAPKEESSVREFKAYVGLHGTEEQIEENHPEIQFKYKIVAKGKIPNDEYDLED
CCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCC
YKYTVMASEIIPLHYVLVALREFLYQTHITWDNRYGYTFSDNTSPGMEIVTGEDALHNNE
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEECCCCCCCCEEEECCHHHCCCC
EPQIKIHVDMKTADRTVTPVLEELIVDWTDQNDTPQSYKLTTDEDFTLNNTMTQTTLADV
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCEEEEEEEEE
EVDSGSVTLGKGSFSAVIDTEGSFSRGSQGISVRVNREGSLSLNLPN
EECCCCEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA