| Definition | Bacillus cereus B4264, complete genome. |
|---|---|
| Accession | NC_011725 |
| Length | 5,419,036 |
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The map label for this gene is ygfF [C]
Identifier: 218230993
GI number: 218230993
Start: 1753898
End: 1754656
Strand: Reverse
Name: ygfF [C]
Synonym: BCB4264_A1849
Alternate gene names: 218230993
Gene position: 1754656-1753898 (Counterclockwise)
Preceding gene: 218233277
Following gene: 218231395
Centisome position: 32.38
GC content: 40.18
Gene sequence:
>759_bases ATGTTAAAAGGGAAAGTAGCGTTAGTTACAGGAGCAAGCCGAGGAATTGGACGAGCGATCGCTAAACGTTTAGCAAATGA CGGTGCATTGGTTGCTGTTCATTACGGTAGTCGAAAAGATGACGCTGAAGAAACTGTTCATGAAATTCGATCAGATGGTG GCCAAGCTTTTTCTATCGGCGCAAATCTAGAATCCTTACACGGTGTAGAAAACCTTTATAACGCTTTAGATACTGAATTA CAAAAGCGCACTGGTGAAACACAATTTGATATTTTAATAAACAATGCTGGCATTGGTCCTGGTGCTTTTATTGAAGAAAC GACTGAACAGTTTTTTGATAGAATGGTTTCAGTAAATGCAAAAGCTCCATTCTTTATCATTCAACTAGCACTACCACGTT TACGTGACAATAGCCGAATTATTAATATTTCATCCGCTGCCACCCGCATTTCTTTACCTGATTTTGTTGCATATAGTATG ACGAAAGGCGCTATTAATACAATGACTTTTACGCTAGCAAAACAGCTTGGAGCACGAGGAATAACGGTGAATGCAATACT TCCAGGATTTATTAAAACAGATATGAATGCAGAACTCTTGAGCGACCCAATGATGAAGCAGTACGCTACTACTATTTCCG CTTTCAATCGCTTAGGTGAAGTAGAGGACATTGCCGATACTGCTGCATTTCTTGCTTCTCCAGACAGCCGCTGGGTTACT GGACAATTAATTGATGTGAGCGGAGGATCTTGTTTATAA
Upstream 100 bases:
>100_bases ATTGGAATGCATTACTTACATACACTCATATATTACTTAAGTATGTTTGCATTACTACATAAAGAAAAACTTATAAAGTT TATGAGGAGATGAGGAAACT
Downstream 100 bases:
>100_bases AAAACATATATTTTCAAATCTTTTTTATTGCGCAATAAAACAATTTATATAATACTATATAAAACATATACATTTAGGAG GATTACAGCAATGTCCGAAA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MLKGKVALVTGASRGIGRAIAKRLANDGALVAVHYGSRKDDAEETVHEIRSDGGQAFSIGANLESLHGVENLYNALDTEL QKRTGETQFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQLALPRLRDNSRIINISSAATRISLPDFVAYSM TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT GQLIDVSGGSCL
Sequences:
>Translated_252_residues MLKGKVALVTGASRGIGRAIAKRLANDGALVAVHYGSRKDDAEETVHEIRSDGGQAFSIGANLESLHGVENLYNALDTEL QKRTGETQFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQLALPRLRDNSRIINISSAATRISLPDFVAYSM TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT GQLIDVSGGSCL >Mature_252_residues MLKGKVALVTGASRGIGRAIAKRLANDGALVAVHYGSRKDDAEETVHEIRSDGGQAFSIGANLESLHGVENLYNALDTEL QKRTGETQFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQLALPRLRDNSRIINISSAATRISLPDFVAYSM TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT GQLIDVSGGSCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=33.9920948616601, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=32.9411764705882, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=32.9457364341085, Blast_Score=117, Evalue=7e-27, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=29.7619047619048, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI33667109, Length=201, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=29.5275590551181, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI209862901, Length=230, Percent_Identity=28.2608695652174, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI19923983, Length=230, Percent_Identity=28.2608695652174, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=27.5303643724696, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI59889578, Length=187, Percent_Identity=33.6898395721925, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI126723191, Length=190, Percent_Identity=31.5789473684211, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI7705855, Length=204, Percent_Identity=27.9411764705882, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI10190746, Length=273, Percent_Identity=28.9377289377289, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI40807363, Length=201, Percent_Identity=30.3482587064677, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=29.7520661157025, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI142976729, Length=195, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=34.6613545816733, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=35.4581673306773, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=33.596837944664, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=31.3008130081301, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=29.6, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=32.5396825396825, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082100, Length=263, Percent_Identity=30.7984790874525, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=30.8300395256917, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=29.5275590551181, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=30.3030303030303, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787545, Length=255, Percent_Identity=21.9607843137255, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=36.4341085271318, Blast_Score=120, Evalue=8e-28, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=32.4110671936759, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=32.9365079365079, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=31.1023622047244, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=31.2, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=33.0855018587361, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=33.206106870229, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=32.4528301886792, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=29.3172690763052, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=274, Percent_Identity=32.4817518248175, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=32.7137546468402, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193204405, Length=273, Percent_Identity=32.2344322344322, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=28.4, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17536025, Length=258, Percent_Identity=29.4573643410853, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=28.3018867924528, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=29.4339622641509, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17555612, Length=220, Percent_Identity=30.4545454545455, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17564282, Length=200, Percent_Identity=30.5, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=31.5985130111524, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17561272, Length=258, Percent_Identity=32.1705426356589, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71982365, Length=210, Percent_Identity=31.4285714285714, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=29.6482412060301, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI72001658, Length=212, Percent_Identity=28.3018867924528, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=30.3030303030303, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=28.5171102661597, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=267, Percent_Identity=27.3408239700375, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17558628, Length=253, Percent_Identity=29.6442687747036, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=29.0566037735849, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI86565303, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508651, Length=259, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559962, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=28.4671532846715, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193203115, Length=246, Percent_Identity=24.7967479674797, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=29.6992481203008, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=31.6326530612245, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193203117, Length=246, Percent_Identity=24.7967479674797, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=28.5171102661597, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17559964, Length=211, Percent_Identity=26.0663507109005, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=27.4436090225564, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322226, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=216, Percent_Identity=31.0185185185185, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=36.6935483870968, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=36.078431372549, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=33.4645669291339, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=32.9365079365079, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=31.8007662835249, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=31.7829457364341, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=30.9803921568627, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644337, Length=175, Percent_Identity=33.1428571428571, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24640492, Length=201, Percent_Identity=29.8507462686567, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI21357673, Length=254, Percent_Identity=27.9527559055118, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI45554248, Length=222, Percent_Identity=33.7837837837838, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640117, Length=222, Percent_Identity=33.7837837837838, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640442, Length=203, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649181, Length=207, Percent_Identity=29.951690821256, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI28573296, Length=207, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27073; Mature: 27073
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGKVALVTGASRGIGRAIAKRLANDGALVAVHYGSRKDDAEETVHEIRSDGGQAFSIG CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEC ANLESLHGVENLYNALDTELQKRTGETQFDILINNAGIGPGAFIEETTEQFFDRMVSVNA CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC KAPFFIIQLALPRLRDNSRIINISSAATRISLPDFVAYSMTKGAINTMTFTLAKQLGARG CCCEEEEEEHHHHCCCCCEEEEEECCCEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCC ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT EEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE GQLIDVSGGSCL EEEEECCCCCCC >Mature Secondary Structure MLKGKVALVTGASRGIGRAIAKRLANDGALVAVHYGSRKDDAEETVHEIRSDGGQAFSIG CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEC ANLESLHGVENLYNALDTELQKRTGETQFDILINNAGIGPGAFIEETTEQFFDRMVSVNA CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC KAPFFIIQLALPRLRDNSRIINISSAATRISLPDFVAYSMTKGAINTMTFTLAKQLGARG CCCEEEEEEHHHHCCCCCEEEEEECCCEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCC ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT EEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE GQLIDVSGGSCL EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8868443 [H]