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The map label for this gene is yhfW [H]

Identifier: 218230908

GI number: 218230908

Start: 1326938

End: 1328134

Strand: Direct

Name: yhfW [H]

Synonym: BCB4264_A1370

Alternate gene names: 218230908

Gene position: 1326938-1328134 (Clockwise)

Preceding gene: 218230992

Following gene: 218235782

Centisome position: 24.49

GC content: 35.09

Gene sequence:

>1197_bases
ATGAAACTTATGATGGGTAAGTTGTTTTGGAATACAGGAGTTTCTGTACCTTGTTATCCACTGTTAGAAAATGATATGAT
ATGTGATGTGCTCGTAGTCGGAAGTGGCGAAGCCGGTGCTCATATAGCGCATTCGTTAGCGAAAATTGGCATGAGTGTTA
CACTTATTGAAAAAAGAGTAATTGCATGTGGTAGCACAGCTGCTAATACAGGTTTACTACAATTTCTTCATGATAAATCG
TTAACCTCTCTTATCCATACATTGGGTAAAGAAAAAGGGGTACGAGCATATAAGCTTTGTTATGAAGCGCTAAGAACAAT
GGAAGAGGTTATACCGACTCTTGATATTAATCCCCATTTTATTCCGCGAAATAGTTTATATTATGCAAGTAAAAGTGAGG
ATGTCTCATTTTTACAAGAGGAATATAATACGTTACAGAATTATGGATTTCCAGTTGAATATTTTACAGAAGCTGATATT
AAGAAACGTTATCCTTTCATAAAACAAGCGGCATTATATACACACGGTGATGCCGAGGTGAATCCGTATTTATTAGCGCA
CAGTCTTTTGCATAAAGCAAATCAAATGGGAGCTAATATATATGAACATACAGAGGAAATACATATAAAAAAACGCAAAA
ATGATTTAATTTGTTACACGAAAACAGGAAATCAAATTGTAGCAAAGAATATTATTATGGCGACAGGTTATGAAGCGCTT
TTTGGAAAGAAAGAAAGAAAAAATACAACAGTAGACACCTCTTATGCAATTGTAACAAATGAAATAGATCAGTTTGAAGG
CTGGCATGAGCGATCGTTAATTTGGGAAACGGCACGGCCCTACTTATATTTTCGAACGTATCGAAACCGCATTATTGTAG
GCGGATTAGATGAAGCGCTGCAAATTCAAACAATTGGTGATACGAAATTATTGCATAAGCGTGATATCCTTATTAATATT
GTAAAAGAGATGTTCCCGCAGTATAAAAATATACAGGCAGACTACTATTGGGCAGCCGCATTTGGTGGTACTCATGATGG
TCTCCCCATTTTAAAAGAAGACGAAAAGATACATAATTTGTTTTACGCATTGCCGTATGGAGGTAATGGAGCTGTATATG
GAATGGTCTTTGCTAAATTATTTGAGCAGTTATTTACAAATAAAGAAAGTAAAGATTTTTCTTTATTTAATCGATAG

Upstream 100 bases:

>100_bases
AATTAAAAATAAAAAATCCAACTAGCCTATGTTAGTTGGATTTTTTTATGAAAAATAACAAAACATAGAAAGGAGAAATT
TATATTTTAGGAGTATAATT

Downstream 100 bases:

>100_bases
AAAAAAGGTAGCGAAGTGATGGAATGAGAGATATAAAAAAGTTTTTACAAAAATTACGTCCTGTACAACTCATCGTTTTG
TTTTATTTATTAGCGGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKLMMGKLFWNTGVSVPCYPLLENDMICDVLVVGSGEAGAHIAHSLAKIGMSVTLIEKRVIACGSTAANTGLLQFLHDKS
LTSLIHTLGKEKGVRAYKLCYEALRTMEEVIPTLDINPHFIPRNSLYYASKSEDVSFLQEEYNTLQNYGFPVEYFTEADI
KKRYPFIKQAALYTHGDAEVNPYLLAHSLLHKANQMGANIYEHTEEIHIKKRKNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKERKNTTVDTSYAIVTNEIDQFEGWHERSLIWETARPYLYFRTYRNRIIVGGLDEALQIQTIGDTKLLHKRDILINI
VKEMFPQYKNIQADYYWAAAFGGTHDGLPILKEDEKIHNLFYALPYGGNGAVYGMVFAKLFEQLFTNKESKDFSLFNR

Sequences:

>Translated_398_residues
MKLMMGKLFWNTGVSVPCYPLLENDMICDVLVVGSGEAGAHIAHSLAKIGMSVTLIEKRVIACGSTAANTGLLQFLHDKS
LTSLIHTLGKEKGVRAYKLCYEALRTMEEVIPTLDINPHFIPRNSLYYASKSEDVSFLQEEYNTLQNYGFPVEYFTEADI
KKRYPFIKQAALYTHGDAEVNPYLLAHSLLHKANQMGANIYEHTEEIHIKKRKNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKERKNTTVDTSYAIVTNEIDQFEGWHERSLIWETARPYLYFRTYRNRIIVGGLDEALQIQTIGDTKLLHKRDILINI
VKEMFPQYKNIQADYYWAAAFGGTHDGLPILKEDEKIHNLFYALPYGGNGAVYGMVFAKLFEQLFTNKESKDFSLFNR
>Mature_398_residues
MKLMMGKLFWNTGVSVPCYPLLENDMICDVLVVGSGEAGAHIAHSLAKIGMSVTLIEKRVIACGSTAANTGLLQFLHDKS
LTSLIHTLGKEKGVRAYKLCYEALRTMEEVIPTLDINPHFIPRNSLYYASKSEDVSFLQEEYNTLQNYGFPVEYFTEADI
KKRYPFIKQAALYTHGDAEVNPYLLAHSLLHKANQMGANIYEHTEEIHIKKRKNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKERKNTTVDTSYAIVTNEIDQFEGWHERSLIWETARPYLYFRTYRNRIIVGGLDEALQIQTIGDTKLLHKRDILINI
VKEMFPQYKNIQADYYWAAAFGGTHDGLPILKEDEKIHNLFYALPYGGNGAVYGMVFAKLFEQLFTNKESKDFSLFNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=390, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45405; Mature: 45405

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMMGKLFWNTGVSVPCYPLLENDMICDVLVVGSGEAGAHIAHSLAKIGMSVTLIEKRV
CCCEECHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEHHHH
IACGSTAANTGLLQFLHDKSLTSLIHTLGKEKGVRAYKLCYEALRTMEEVIPTLDINPHF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
IPRNSLYYASKSEDVSFLQEEYNTLQNYGFPVEYFTEADIKKRYPFIKQAALYTHGDAEV
ECCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCHHHHHHEEECCCCCC
NPYLLAHSLLHKANQMGANIYEHTEEIHIKKRKNDLICYTKTGNQIVAKNIIMATGYEAL
CHHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCEEEEECCCCEEEHHHHHEECCCHHH
FGKKERKNTTVDTSYAIVTNEIDQFEGWHERSLIWETARPYLYFRTYRNRIIVGGLDEAL
HCCCCCCCCCCCCEEEEEECCHHHHCCCHHHCEEECCCCCEEEEEEECCEEEECCCCCCE
QIQTIGDTKLLHKRDILINIVKEMFPQYKNIQADYYWAAAFGGTHDGLPILKEDEKIHNL
EEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCHHEEEE
FYALPYGGNGAVYGMVFAKLFEQLFTNKESKDFSLFNR
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKLMMGKLFWNTGVSVPCYPLLENDMICDVLVVGSGEAGAHIAHSLAKIGMSVTLIEKRV
CCCEECHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEHHHH
IACGSTAANTGLLQFLHDKSLTSLIHTLGKEKGVRAYKLCYEALRTMEEVIPTLDINPHF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
IPRNSLYYASKSEDVSFLQEEYNTLQNYGFPVEYFTEADIKKRYPFIKQAALYTHGDAEV
ECCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCHHHHHHEEECCCCCC
NPYLLAHSLLHKANQMGANIYEHTEEIHIKKRKNDLICYTKTGNQIVAKNIIMATGYEAL
CHHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCEEEEECCCCEEEHHHHHEECCCHHH
FGKKERKNTTVDTSYAIVTNEIDQFEGWHERSLIWETARPYLYFRTYRNRIIVGGLDEAL
HCCCCCCCCCCCCEEEEEECCHHHHCCCHHHCEEECCCCCEEEEEEECCEEEECCCCCCE
QIQTIGDTKLLHKRDILINIVKEMFPQYKNIQADYYWAAAFGGTHDGLPILKEDEKIHNL
EEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCHHEEEE
FYALPYGGNGAVYGMVFAKLFEQLFTNKESKDFSLFNR
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]