Click here to switch to the map view.

The map label for this gene is yhbE [H]

Identifier: 218230845

GI number: 218230845

Start: 2778207

End: 2778917

Strand: Reverse

Name: yhbE [H]

Synonym: BCB4264_A2896

Alternate gene names: 218230845

Gene position: 2778917-2778207 (Counterclockwise)

Preceding gene: 218231640

Following gene: 218231422

Centisome position: 51.28

GC content: 35.72

Gene sequence:

>711_bases
ATGCGTACAGATAATTTGATTATAAATGGTTACGGTTCATCGAATGGCGGCGAGTTTCATAAAGTGCAATTAAACGGAAA
AGGAACTGTGAATGGAAATGTTGAATGTGAGCAATTTGAATGTAACGGTTACGGTGCAGTTACTGGTGATTTGAAAAGTA
GCAGTGCACGAATTAGCGGATCTGGTAAAGTTGATGGTACAGTTCATGCTGAAACGATGCGAATTGATGGAAAAGCAACA
ATTACGCAAAATGTAAAAGCAAACAGTTTGAAAATTGCAGGAAAAGGTACGATAGGTGGAAATGTCACTGGTGAAGAATT
TAAAGTCAATGGTCAAGCTACAATTGACGGTAATTGTGAAGTGGATACTTTTTCTTCAGAAGGACAATTTACAATCGGTG
GTTTATTAAGCGCAGATGAAATTAATATAAATATTCACGGTACATGTCGAGCGAAAGAAATTGGTGGTCAAACGATTAAA
GTAAGACATAGATCAGGTACATTTAGTAGGTTATTTAAAACAGTGTTTGGCTTGCAGTTAGAAGCTGAACTATTAGAAGG
TGACAATATCGATATTGATTATGCTCACATAAGAACGGTAAGAGGAAACAATGTTACAGTAGGAGCAAACTGTGAGATTG
AACTGATTGAATATACCGGTGTTCTTACTGTTGATAAAAATGCAAATGTAAAAGAAATTAAGCAGGTTTAA

Upstream 100 bases:

>100_bases
GATTTAATTTTTGAAAAAGGCACCAAAATCGTTTTACGCGAAGCGATTATGAAATATACCGAAGCATTAAAAACTAAATT
GTTCTAGTGGAGGAGAAAGT

Downstream 100 bases:

>100_bases
CGGAAGGGAGAAATCAGTATGGAACATCCACATAGTCTCACAGTAAATGGTTCTGGTAATTCAGCAGGCGGAGATTATAA
TAAAGTGAAGATTCGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRTDNLIINGYGSSNGGEFHKVQLNGKGTVNGNVECEQFECNGYGAVTGDLKSSSARISGSGKVDGTVHAETMRIDGKAT
ITQNVKANSLKIAGKGTIGGNVTGEEFKVNGQATIDGNCEVDTFSSEGQFTIGGLLSADEININIHGTCRAKEIGGQTIK
VRHRSGTFSRLFKTVFGLQLEAELLEGDNIDIDYAHIRTVRGNNVTVGANCEIELIEYTGVLTVDKNANVKEIKQV

Sequences:

>Translated_236_residues
MRTDNLIINGYGSSNGGEFHKVQLNGKGTVNGNVECEQFECNGYGAVTGDLKSSSARISGSGKVDGTVHAETMRIDGKAT
ITQNVKANSLKIAGKGTIGGNVTGEEFKVNGQATIDGNCEVDTFSSEGQFTIGGLLSADEININIHGTCRAKEIGGQTIK
VRHRSGTFSRLFKTVFGLQLEAELLEGDNIDIDYAHIRTVRGNNVTVGANCEIELIEYTGVLTVDKNANVKEIKQV
>Mature_236_residues
MRTDNLIINGYGSSNGGEFHKVQLNGKGTVNGNVECEQFECNGYGAVTGDLKSSSARISGSGKVDGTVHAETMRIDGKAT
ITQNVKANSLKIAGKGTIGGNVTGEEFKVNGQATIDGNCEVDTFSSEGQFTIGGLLSADEININIHGTCRAKEIGGQTIK
VRHRSGTFSRLFKTVFGLQLEAELLEGDNIDIDYAHIRTVRGNNVTVGANCEIELIEYTGVLTVDKNANVKEIKQV

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007607 [H]

Pfam domain/function: PF04519 DUF583 [H]

EC number: NA

Molecular weight: Translated: 25116; Mature: 25116

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDNLIINGYGSSNGGEFHKVQLNGKGTVNGNVECEQFECNGYGAVTGDLKSSSARISG
CCCCCEEEECCCCCCCCEEEEEEECCCEEECCCEEEEEEEECCEEEEECCCCCCCEEEEC
SGKVDGTVHAETMRIDGKATITQNVKANSLKIAGKGTIGGNVTGEEFKVNGQATIDGNCE
CCCCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCEEEECCCCE
VDTFSSEGQFTIGGLLSADEININIHGTCRAKEIGGQTIKVRHRSGTFSRLFKTVFGLQL
EEEECCCCCEEEEEEEEEEEEEEEEEEEEEHHHCCCEEEEEEECCCCHHHHHHHHHCEEE
EAELLEGDNIDIDYAHIRTVRGNNVTVGANCEIELIEYTGVLTVDKNANVKEIKQV
EEEEECCCCCEEEEHEEEEEECCCEEECCCCEEEEEEEEEEEEECCCCCHHHHHCC
>Mature Secondary Structure
MRTDNLIINGYGSSNGGEFHKVQLNGKGTVNGNVECEQFECNGYGAVTGDLKSSSARISG
CCCCCEEEECCCCCCCCEEEEEEECCCEEECCCEEEEEEEECCEEEEECCCCCCCEEEEC
SGKVDGTVHAETMRIDGKATITQNVKANSLKIAGKGTIGGNVTGEEFKVNGQATIDGNCE
CCCCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCEEEECCCCE
VDTFSSEGQFTIGGLLSADEININIHGTCRAKEIGGQTIKVRHRSGTFSRLFKTVFGLQL
EEEECCCCCEEEEEEEEEEEEEEEEEEEEEHHHCCCEEEEEEECCCCHHHHHHHHHCEEE
EAELLEGDNIDIDYAHIRTVRGNNVTVGANCEIELIEYTGVLTVDKNANVKEIKQV
EEEEECCCCCEEEEHEEEEEECCCEEECCCCEEEEEEEEEEEEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]