| Definition | Shewanella baltica OS223 chromosome, complete genome. |
|---|---|
| Accession | NC_011663 |
| Length | 5,145,902 |
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Identifier: 217975002
GI number:
Start: 4571580
End: 4576052
Strand: Reverse
Name: Not Available
Synonym: Sbal223_3853
Alternate gene names: NA
Gene position: NA
Preceding gene: 217975003
Following gene: 217975001
Centisome position: NA
GC content: NA
Gene sequence:
>4473_bases ATGCAAACAAAAATAATTAGAACAATTCTGACATGTTTCATCCTTTCATTGACTTGCGTCCACTCGGCTTGGGCGGGCGG TTTTGTGCAGCGAGTTTTTACTGATAGGGACGGTTTAGCGGTCACCAGTATCCGAGGCTTGGCCTTAGATGATTACGGTT TTGTATGGGCCGCGACTGAGCAGGGCTTGTATCGAGTCAGTAATTCTAAGGTGCGGCGTATCGATAAAATCGGCACCGAA TCGCGACTGTCAGATGACTTTTTAACCTCAGTAGTAAACATCGACCGTGACAAGTTATTGGTTAGCACCAACGCCGCAAT TTACCTCTACGATATTGTCCAAAATCAATTTACCGCCTTTGGTTCTCCCTATTTATTCCCGCAGTTTCCCGGTGGTGCGC TGGTCTCGGCAGCCCGAAAGAATAGTAAAACATGGCGATTATTAATTGATAATGGCCAGATTTATGAATTCTCCCCTTCA AAGTCCGAACTGCGCCTCATTACTCAGTTGCCGGTTAATCGCGATCTTCCTTGGCGCAAATTGCTGGTCATGCCTAACGG TCAAATGCTGGTCGCGGGAACCTTGCAATTAGAGTTGCTGGAGCAAAATGGCGAGCGGGTGTTCCAATACTCTTGGACTG AATCTATGGGCAGTATTCTCGATATGTTAGAGGATTCTCAGCATAGGATCTGGATTGCGACCGGACGCGGCGTTTATCAA TTAGATCAAATTTCTAGGCAAATTATCCCCGTGCCAGAATTGCCCGATTGGAGCACAGTGATCATTGAGGATGCTAAAGG ATATTTATGGTTTTCCAGTCGTATCGGTTTATTGAAATGGTCGCCCGAAACGCGGCAGATTGAAAACTATCAAAAAGAGT TGAAGGCTGAGGCCAACATGGAAACGCTGAAAGCCATGTTGTTTGATGATGCTGGCTTGATGTGGGTCGGAGGCTCAGGC GATGGATTGGCTTTATTGGCGTCACAGCCTGATTTCATCCTCGATACTTATACTGGCGATGAACCCTATCAACTGAGCGA TGCCATGACTTGGTCAGTGCATGCCAGTGATGAAGGGGTTTGGTTAGGTTCTTCCAGTTTAGATTTTATTGCAAAAGGCA GTAGCAAAGCGTTTAACGTGCCAATTGAGGGATTTAATCCCCATGAAAGTATTTATGATATCAGTGCGTTTGAGGGACAT TATTTACTGTTATCGACGACCAGCGGCCTCTTTGTTGTCGATAAAGACACTTTGCAAGGCAGTAGCTTTTCTAAATGGAC TCACGGTAATGATGATTTTAAAAATAAGCTTATTTATAAAACCTATCGTGACCCTAAACTGAAAGGACGTGTTTGGATTG CGACCACAACAGGGCTGTATTTTTGGGAAATGGGACTGTACGAACCTCAGCCCTTTGATATTGATAAGTCATCGAACAAG TTTGACGGCCCTAAGCGCCCCGTGATCCGCACTATTTATCGCACCTCCGACGGTCGTTTGTGGGTGGGCGGTAAAAAAGT CTTTGGTTACATCGACAGCCAAAATGAGTTTCATGATCAGCGGCAGTTGTTTAATGCTTTTGCTGCACAACCCACGGTCA GTCACATTGAAGAAATGTCACCTGGGGTGATCTGGTTTGGCTCCTATGAAAAAGGTTTATTTGAATACCATCAGCAAACG GGATCGTTAATTTCACTGACCTCCGAGTGGCAATTAAATTGTAGTTCAGTGTTTTTTATTCAAAAAACGCCCAAGTCTAA TCTTGTGGGCTGCTCGGATTCTTTGGTGCGACAGGATATCCAAACGGGCGAGATTGCTATGTTTAATCAACTCGATGGTT TAATTTCCGATGAGATGAACGAAGGCGCCTATTTTTACTCACCTAAAACAGGCTTTTACTTAGGCACGCCCGAGGGCGTG ATGCGACTCGATGTCGATAGGCTGGCCAATCGCATTACCGATGACCATGTGATGCTTGAATCTGTCTCTGTGTACTATAA CAACACGACCGAAGTGTCCCTGTTGCCGCGTAACCTGATGACCATAAAACCCGAAGCCAATATGGTCAGTTTTCAAATCA CTAACTTAGATTATCTCGATGATTCGCCCATCCAATTTAAATACCGATTACGTTATCAAGATGAAGAGAGTAATTATGTG CTGCTTCAGGGGGAGTCGCAGATTAACCTCGCAGGTTTAGCTTCGGGTGGTTATGTTTTAGATATTTTAAGTCAGGTCAA TGGAATATGGTCCGATAAACCTTTTACCTATCCCTTTTATGTTGAGCAGCATTGGTGGTTATCCCAAGGTTTTAAAGGCA TTTTACTGCTGTTATTTTCTATTATTGCCTTAAGTCTTGCTTGGTATCGGCAACGTCAGATCAATACCTTTAAGCAGATG AATCAGGCATTAACTGAGAGTGATGACAGGCTGAGGCAATCTTTGCGCGGTAGTGACTCGGATCTCTGGGAATGGCATAA AAATACTCAGGCATTTCATCTTGATAATCGCGGTGCCGTTCTCGGTACCCATGCCAATGAGATTGTTGTGAGCTTAGCAG AGTTGCCTGTGCATCCACAGGATAGGGAAAAAGCGCTCGCTCAGTGGGATAGCATGATATCGGGGGAGATAGATAGATTC GAAGCCGAATATCGTTATCAGCGCAAGGACGGTAATTGGGGCTGGTTAAGGGTAAGAGGGCGGCCCGTTGCCCGTAATAA GCACTCCAATGAGATTGAGCGGGTCGCGGGTATTTATAGTGATATTACCGTGCAACGACAGTTAGAAGATGAAGTGAATT TACTGGCAAAAGCGTTTGGTAACACATCTGAAGGTGTACTGATTTTAGATGTCGAAGGCAGTATTCGCGTGGCGAATTAC GCGGCACAACAGATTATTGGTATCGATTCTACTGATTTAGTTGGCCAATCTTTTACCCAATTTGTACAGATGAATGACGG TTTGGCATCGGAAATTAAGCAACTCCTCAGTGATAGCCAGTCTTGGACGGGCGAGCGTGAGTTAATTAACGCCAGTCAGC AACCCTGTCCTGTGTGGCTAAACGTATCTGTGATGCAAAGTGCCAACGGTAAAGTGACCCATTATGTGGTGGTATTCTCG GATATTACCGAACGTAAACAAACCGAAGCCGATTTACGCCGCCTAGCCAATTACGATGTGCTTACGGGATTGCCAAACCG CTCCTTATTTTCTAGTCGCCTATTACAGTCGATTCAGGCCGCGCAGCAAACGGGCGAGAAATTGGCGCTACTGTTCTTGG ATCTCGATAGATTTAAGCATGTTAATGACTCCTATGGTCATAGCATGGGCGATGCCTTACTGGTCGAAGCCTCAAGCCGA CTACAATCCTGTATTGCTAGCGAGCATATGCTCTGCCGCTTTGGCGGCGATGAATTTGTGATTTTACTCAGAAATGCCAA CAGCATTGATGATATCAACCACATTGCCGAGCGGCTGCTGGAACAAATCGTGGCGCCTTTTAAGTTATATGGCCGTGAGT TTTATATTTCGACCAGCATTGGCATCAGTATTTGGCCCGATGATGCGGTTCAGCCTGAAGCCTTTATCAAGAATGCCGAT CTCGCTATGTACCACGCCAAAGAAGAAGGGCGGGGAAATTTCCAATATTATTCCTCTGAGCGTAATGCCCAAGCTCTCTA TCATTTACGGCTTGAGGCCGATTTACGTAAAGCCATAGAGCGGCAAGAGTTCGAGCTTTATTACCAGCCGCAAATTGATA TTTTGCGTAACGATAAGCTCATTGGAATGGAAGCATTAATTCGCTGGAAACATCCGCTGGACGGCTTTATTCGTCCCGAT ATTTTCATCAAAGTCGCCGAGGCCTGCGGTTTAATTGTCGATATTGACCGCTGGGTGTTAAGGCAAGCCTGTGTGCAGGG AGCACAGTGGGCGAAACGTTATGGCGCTACCTTTAAGTTGTCGGTTAATATTTCGGCGGTGCATTTCAGGCAGCCCGATT TTATTGAAGACATACAAAGAATTCTGCATGAAACCCAAATGCCGACGGCGTCTTTAGGCTTAGAAATCACTGAAGGCGTG TTGATGAAAGAGCTGCACGTCGCTAAAGATCATCTCTCGCGATTGAAGTCCTTGGGGATTGAAGTTGCCATTGATGACTT TGGGACGGGTTATTCTTCTCTTGCTTATTTACGCCATTTTGAGGTGAATACCTTAAAAATCGATCGCTCCTTCTTGATTG ATATCGCCACCAATAAGGCCGATCAGGCGATTGTGAGCAGTATTATTGAATTAGCCCGTAACCTTAAATTAAATGTGGTT GCCGAAGGGATTGAGACGGTTGAGCAGTTAGAGCAAGTATTTAGCCGCGGCTGTTATATTATTCAAGGGTATTATTTTGC TAAGCCTATGTGCGTGGCTGATTTTGAACGCTATTTAGAAACAGATAACAGAATCGTCGCTATTGAGCATTAA
Upstream 100 bases:
>100_bases TTTATTGTCTGTATTTTTTTGTAACTTTTATGTAAACAAGCGGATGAATTGATAGGATTGAGCTGCTACAGTACAACTAT GGTATGAAGTAAGCCGTCAC
Downstream 100 bases:
>100_bases GTAAGATCATATAGCCTATTATCGGCTCGTTTATGTTTGATCATGCGTCCTTGATATTTGTGCTGATTATTGGCGGTAAT CAGCAAGATATAAACTTACG
Product: PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1490_residues MQTKIIRTILTCFILSLTCVHSAWAGGFVQRVFTDRDGLAVTSIRGLALDDYGFVWAATEQGLYRVSNSKVRRIDKIGTE SRLSDDFLTSVVNIDRDKLLVSTNAAIYLYDIVQNQFTAFGSPYLFPQFPGGALVSAARKNSKTWRLLIDNGQIYEFSPS KSELRLITQLPVNRDLPWRKLLVMPNGQMLVAGTLQLELLEQNGERVFQYSWTESMGSILDMLEDSQHRIWIATGRGVYQ LDQISRQIIPVPELPDWSTVIIEDAKGYLWFSSRIGLLKWSPETRQIENYQKELKAEANMETLKAMLFDDAGLMWVGGSG DGLALLASQPDFILDTYTGDEPYQLSDAMTWSVHASDEGVWLGSSSLDFIAKGSSKAFNVPIEGFNPHESIYDISAFEGH YLLLSTTSGLFVVDKDTLQGSSFSKWTHGNDDFKNKLIYKTYRDPKLKGRVWIATTTGLYFWEMGLYEPQPFDIDKSSNK FDGPKRPVIRTIYRTSDGRLWVGGKKVFGYIDSQNEFHDQRQLFNAFAAQPTVSHIEEMSPGVIWFGSYEKGLFEYHQQT GSLISLTSEWQLNCSSVFFIQKTPKSNLVGCSDSLVRQDIQTGEIAMFNQLDGLISDEMNEGAYFYSPKTGFYLGTPEGV MRLDVDRLANRITDDHVMLESVSVYYNNTTEVSLLPRNLMTIKPEANMVSFQITNLDYLDDSPIQFKYRLRYQDEESNYV LLQGESQINLAGLASGGYVLDILSQVNGIWSDKPFTYPFYVEQHWWLSQGFKGILLLLFSIIALSLAWYRQRQINTFKQM NQALTESDDRLRQSLRGSDSDLWEWHKNTQAFHLDNRGAVLGTHANEIVVSLAELPVHPQDREKALAQWDSMISGEIDRF EAEYRYQRKDGNWGWLRVRGRPVARNKHSNEIERVAGIYSDITVQRQLEDEVNLLAKAFGNTSEGVLILDVEGSIRVANY AAQQIIGIDSTDLVGQSFTQFVQMNDGLASEIKQLLSDSQSWTGERELINASQQPCPVWLNVSVMQSANGKVTHYVVVFS DITERKQTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASSR LQSCIASEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQIVAPFKLYGREFYISTSIGISIWPDDAVQPEAFIKNAD LAMYHAKEEGRGNFQYYSSERNAQALYHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPLDGFIRPD IFIKVAEACGLIVDIDRWVLRQACVQGAQWAKRYGATFKLSVNISAVHFRQPDFIEDIQRILHETQMPTASLGLEITEGV LMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEVNTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVV AEGIETVEQLEQVFSRGCYIIQGYYFAKPMCVADFERYLETDNRIVAIEH
Sequences:
NA
Specific function: NA
COG id: COG5001
COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA