Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is muT4 [H]

Identifier: 213693334

GI number: 213693334

Start: 2817866

End: 2819158

Strand: Direct

Name: muT4 [H]

Synonym: Blon_2488

Alternate gene names: 213693334

Gene position: 2817866-2819158 (Clockwise)

Preceding gene: 213693332

Following gene: 213693335

Centisome position: 99.47

GC content: 63.57

Gene sequence:

>1293_bases
ATGATTACGCCCGCCGACCTTGCCCGCATACTGGGGCAAACACCAGATTCGGCGGATAGCCATACCCAAGACCACCTGCT
GTATACGTCCGAAACTCCGCATCATTCCGCCGATTCGGGCGATTCTTCCGATGTCGGCGGCACCGCGAGCCACTCCACCA
ATCAGGCCGTTCATCAAGACGAAGTAGACGCAGTACCGACTGCGCAACATTCCGGTGTGCCCGGCACGCCCGCAACGCCC
GTCACGCCCGCACCATCCGAATCCGAAATATCGGACTCCGCCAGCGACATGCCCGCACCGAAGCCGATGATGCCCACACC
GGCCACCGTCTTCGGCATGCATGCCACCGTCACCATCGCCACTACCAGCGGCACTATCGAAGGGCAGGCCGATGGTATCG
CCGGCGAGGCCGGTGCCGAGACGATTGCCGAGGTCGAGCCGATTATCGCCACGGCACAAACGTCCGTAACCATCGTCACG
AACGATCCCGCGGCGACCGCCCACGCGGCCGTAGATGCTGCCGTTGCGGTCGCCAAGGCCGCCGCCGCGCACACCACAGC
GATACCGACTCCGCGCGACGTGCTGATGCCGCCTGCGGCACGTACCGCACCGGCCGCAGTGCCGGCCACCATGCCGGTCT
CAGCGCCGTCTGCAGCACCAGTGAGGCCCGTAACGTCAGCGCATCCCACGCCGGCCACGGTCTTCGGCCGGCATCCGTCC
GCGGATGTTGCCTCGCCGGAACCGGCAGTGCCAGTAGAACCGGTGACGCCATCCGGCCCGACTCCGGCCATGATGCCGCA
ACGCCGTACGTCGGACGGTCCGACCACATTCGCTTCACTGGATGCCCAGGAACTGCCGGTCGTACGCGAATATTCGGCAG
GCGGTCTGATTTTCGATGACCAGAACCGCGTGGCCATTATCGCCCGTCATTCCCGCTCCGGCCATCTCGAATGGTGCTTG
CCGAAGGGGCATATCGAGAAAGGCGAGACCCCGCAGCAGACCGCTGTGCGCGAAGTGCATGAAGAGACCGGCATCCTGGG
CGAGGTGATCGATTCCATCGCCACCATCGACTACTGGTTCACCGGCACCACGCAGCGCGTGCATAAGCTGGTCCATCACT
TCGCGCTCAAACAGACCGGCGGCGAACTGACGGTGGAAGGAGACCCGGATCATGAGGCGGAAGACGCCCTCTGGGTACGT
TTTGAAGATTTGGACGACGTGTTGAGCTATCCCAACGAACGCAAAATCGCGTGGCTCTACGCCAGGAAGAAGAACAGGCA
GGCAAACGAGTGA

Upstream 100 bases:

>100_bases
ACTTCGAAATCCAATGGGCACCTTCCCGCGTGCGACGTTTTTCTGCCCTACCAGCATACCGTTACCCCACCTGCACACGG
GGTTGAGTAAGGTGGAGAAT

Downstream 100 bases:

>100_bases
ACCTACCCGGAGTCTTACGACATTGCACACGTCTGGCACACGCACTGGCGGCTGGCGTCGCCGTTGTGGCGATGCTGGCC
GCTCCATTGACCGTCTACGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MITPADLARILGQTPDSADSHTQDHLLYTSETPHHSADSGDSSDVGGTASHSTNQAVHQDEVDAVPTAQHSGVPGTPATP
VTPAPSESEISDSASDMPAPKPMMPTPATVFGMHATVTIATTSGTIEGQADGIAGEAGAETIAEVEPIIATAQTSVTIVT
NDPAATAHAAVDAAVAVAKAAAAHTTAIPTPRDVLMPPAARTAPAAVPATMPVSAPSAAPVRPVTSAHPTPATVFGRHPS
ADVASPEPAVPVEPVTPSGPTPAMMPQRRTSDGPTTFASLDAQELPVVREYSAGGLIFDDQNRVAIIARHSRSGHLEWCL
PKGHIEKGETPQQTAVREVHEETGILGEVIDSIATIDYWFTGTTQRVHKLVHHFALKQTGGELTVEGDPDHEAEDALWVR
FEDLDDVLSYPNERKIAWLYARKKNRQANE

Sequences:

>Translated_430_residues
MITPADLARILGQTPDSADSHTQDHLLYTSETPHHSADSGDSSDVGGTASHSTNQAVHQDEVDAVPTAQHSGVPGTPATP
VTPAPSESEISDSASDMPAPKPMMPTPATVFGMHATVTIATTSGTIEGQADGIAGEAGAETIAEVEPIIATAQTSVTIVT
NDPAATAHAAVDAAVAVAKAAAAHTTAIPTPRDVLMPPAARTAPAAVPATMPVSAPSAAPVRPVTSAHPTPATVFGRHPS
ADVASPEPAVPVEPVTPSGPTPAMMPQRRTSDGPTTFASLDAQELPVVREYSAGGLIFDDQNRVAIIARHSRSGHLEWCL
PKGHIEKGETPQQTAVREVHEETGILGEVIDSIATIDYWFTGTTQRVHKLVHHFALKQTGGELTVEGDPDHEAEDALWVR
FEDLDDVLSYPNERKIAWLYARKKNRQANE
>Mature_430_residues
MITPADLARILGQTPDSADSHTQDHLLYTSETPHHSADSGDSSDVGGTASHSTNQAVHQDEVDAVPTAQHSGVPGTPATP
VTPAPSESEISDSASDMPAPKPMMPTPATVFGMHATVTIATTSGTIEGQADGIAGEAGAETIAEVEPIIATAQTSVTIVT
NDPAATAHAAVDAAVAVAKAAAAHTTAIPTPRDVLMPPAARTAPAAVPATMPVSAPSAAPVRPVTSAHPTPATVFGRHPS
ADVASPEPAVPVEPVTPSGPTPAMMPQRRTSDGPTTFASLDAQELPVVREYSAGGLIFDDQNRVAIIARHSRSGHLEWCL
PKGHIEKGETPQQTAVREVHEETGILGEVIDSIATIDYWFTGTTQRVHKLVHHFALKQTGGELTVEGDPDHEAEDALWVR
FEDLDDVLSYPNERKIAWLYARKKNRQANE

Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 45001; Mature: 45001

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPADLARILGQTPDSADSHTQDHLLYTSETPHHSADSGDSSDVGGTASHSTNQAVHQD
CCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EVDAVPTAQHSGVPGTPATPVTPAPSESEISDSASDMPAPKPMMPTPATVFGMHATVTIA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCHHEEEEEEEEEEE
TTSGTIEGQADGIAGEAGAETIAEVEPIIATAQTSVTIVTNDPAATAHAAVDAAVAVAKA
EECCEECCCCCCCCCCHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHH
AAAHTTAIPTPRDVLMPPAARTAPAAVPATMPVSAPSAAPVRPVTSAHPTPATVFGRHPS
HHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
ADVASPEPAVPVEPVTPSGPTPAMMPQRRTSDGPTTFASLDAQELPVVREYSAGGLIFDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCEEEEECCCCCEEEC
QNRVAIIARHSRSGHLEWCLPKGHIEKGETPQQTAVREVHEETGILGEVIDSIATIDYWF
CCCEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHEEEEE
TGTTQRVHKLVHHFALKQTGGELTVEGDPDHEAEDALWVRFEDLDDVLSYPNERKIAWLY
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCEEEEEE
ARKKNRQANE
EECCCCCCCC
>Mature Secondary Structure
MITPADLARILGQTPDSADSHTQDHLLYTSETPHHSADSGDSSDVGGTASHSTNQAVHQD
CCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EVDAVPTAQHSGVPGTPATPVTPAPSESEISDSASDMPAPKPMMPTPATVFGMHATVTIA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCHHEEEEEEEEEEE
TTSGTIEGQADGIAGEAGAETIAEVEPIIATAQTSVTIVTNDPAATAHAAVDAAVAVAKA
EECCEECCCCCCCCCCHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHH
AAAHTTAIPTPRDVLMPPAARTAPAAVPATMPVSAPSAAPVRPVTSAHPTPATVFGRHPS
HHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
ADVASPEPAVPVEPVTPSGPTPAMMPQRRTSDGPTTFASLDAQELPVVREYSAGGLIFDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCEEEEECCCCCEEEC
QNRVAIIARHSRSGHLEWCLPKGHIEKGETPQQTAVREVHEETGILGEVIDSIATIDYWF
CCCEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHEEEEE
TGTTQRVHKLVHHFALKQTGGELTVEGDPDHEAEDALWVRFEDLDDVLSYPNERKIAWLY
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCEEEEEE
ARKKNRQANE
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]