Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213693300

Identifier: 213693300

GI number: 213693300

Start: 2771841

End: 2772452

Strand: Direct

Name: 213693300

Synonym: Blon_2454

Alternate gene names: NA

Gene position: 2771841-2772452 (Clockwise)

Preceding gene: 213693297

Following gene: 213693301

Centisome position: 97.85

GC content: 58.82

Gene sequence:

>612_bases
ATGGATGCCTCTCACCTGTTCACCGCCGCGCTTCGGCTGCGGTCGCCTTGGAGGGTCGGGTCTGCGGACTTCCGTGACGC
CGACGGCGACGGGCGGGAGCCGCACATCACGATCGGCTTCGAGCCCGGCAGAGGGTTCATGCTCCTGTTCGAGGCGTGGG
TGTGGCTATATCGCCTGTGCTCGTGGATGATGCACTCGAGGCTCGAACCTATGAAGGAGCTCGCCCGCTTGTTCCGCCGC
CACTTCGCCACCATAATCTACCTGACCTGCGGCAGCTCACATATTAACGGTTCTTCTGATTGCGACGCGCAAGAGCAACT
TCGGGCGCGCTTGGATTGCCTGCTTGAACCCACTGGTGCGGGGATAGATGATTTAGTTGACACGCCTGCGGGAATCTGGT
GGGGATTTCGCTGGCACACCGGATTTCAAGCAAACCCCGCCTCGGGAACCGCTCCGGACTTCGGCGTTGGCCCGGTTCGT
ATGTCAATCGATTGCCGTCTGAACCGGGACAGAATCCGCTGTCCCGGTTCGCGATTTTTGTCCTTTTTTACAAACAGGGA
CAAGCCAATCTCCGCAGTTCATATGCTCCGTAATACAAAATCGGCGGAATAG

Upstream 100 bases:

>100_bases
CTCATAAGCTGCACATGCTATTTAGCAACATATGGGCCCTTTCGCTGTTTGTGGTGGGTGACTGTGCCGTGGGGTGATGT
TGGTCGGGTAGGTTGGAGGC

Downstream 100 bases:

>100_bases
AGCCGATCCCGGAATCAACATGTTGTCCCGGTTTTCACATAAAACGATTGACATTCATACCGGGACAATGAAAATTGTCC
CGGTTCGTGAAAATCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDASHLFTAALRLRSPWRVGSADFRDADGDGREPHITIGFEPGRGFMLLFEAWVWLYRLCSWMMHSRLEPMKELARLFRR
HFATIIYLTCGSSHINGSSDCDAQEQLRARLDCLLEPTGAGIDDLVDTPAGIWWGFRWHTGFQANPASGTAPDFGVGPVR
MSIDCRLNRDRIRCPGSRFLSFFTNRDKPISAVHMLRNTKSAE

Sequences:

>Translated_203_residues
MDASHLFTAALRLRSPWRVGSADFRDADGDGREPHITIGFEPGRGFMLLFEAWVWLYRLCSWMMHSRLEPMKELARLFRR
HFATIIYLTCGSSHINGSSDCDAQEQLRARLDCLLEPTGAGIDDLVDTPAGIWWGFRWHTGFQANPASGTAPDFGVGPVR
MSIDCRLNRDRIRCPGSRFLSFFTNRDKPISAVHMLRNTKSAE
>Mature_203_residues
MDASHLFTAALRLRSPWRVGSADFRDADGDGREPHITIGFEPGRGFMLLFEAWVWLYRLCSWMMHSRLEPMKELARLFRR
HFATIIYLTCGSSHINGSSDCDAQEQLRARLDCLLEPTGAGIDDLVDTPAGIWWGFRWHTGFQANPASGTAPDFGVGPVR
MSIDCRLNRDRIRCPGSRFLSFFTNRDKPISAVHMLRNTKSAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23034; Mature: 23034

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASHLFTAALRLRSPWRVGSADFRDADGDGREPHITIGFEPGRGFMLLFEAWVWLYRLC
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
SWMMHSRLEPMKELARLFRRHFATIIYLTCGSSHINGSSDCDAQEQLRARLDCLLEPTGA
HHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GIDDLVDTPAGIWWGFRWHTGFQANPASGTAPDFGVGPVRMSIDCRLNRDRIRCPGSRFL
CHHHHHCCCCCCEECEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHH
SFFTNRDKPISAVHMLRNTKSAE
HHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDASHLFTAALRLRSPWRVGSADFRDADGDGREPHITIGFEPGRGFMLLFEAWVWLYRLC
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
SWMMHSRLEPMKELARLFRRHFATIIYLTCGSSHINGSSDCDAQEQLRARLDCLLEPTGA
HHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GIDDLVDTPAGIWWGFRWHTGFQANPASGTAPDFGVGPVRMSIDCRLNRDRIRCPGSRFL
CHHHHHCCCCCCEECEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHH
SFFTNRDKPISAVHMLRNTKSAE
HHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA