| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is aroP [H]
Identifier: 213693285
GI number: 213693285
Start: 2739471
End: 2741021
Strand: Direct
Name: aroP [H]
Synonym: Blon_2439
Alternate gene names: 213693285
Gene position: 2739471-2741021 (Clockwise)
Preceding gene: 213693278
Following gene: 213693289
Centisome position: 96.71
GC content: 60.61
Gene sequence:
>1551_bases ATGGCGGGCATCGTGCATGGCGGGGTCGCCATCCATGCCGATAGTCAGAGGAACCTGGGGAAGGGCATCATGAGCACCAA CGATACGTCCGAACAGCCGCGCGAAACCGACGATGTGCCGGTGCCGGCCACGCTGCGCAAGTCACTGAAGAACCGTCATA TCCAGCTGATTGCACTGGGCGGCGCCATCGGAACCGGCCTGTTCTATGGTTCCAGCGAAGCCATCGCGCTGGCCGGCCCC TCGATTCTGCTCGCCTACTTGGTCGGCGGCTTCGCAATCTTCATGATCGTGCGCGCGCTGAGCGAAATGTCCGTTGAGGA TCCGGAGGCGGGCGCGTTCAGCTACTACGCCACTCGCTACTGGTCCAAGCGCGCCGGCTTCATCTCCGGTTGGAACTACT GGTTCAATTACATCCTCGTCTCGATGGTGGAGCTGTCAGTGGTGGGTTCGTTTGTGAACTACTGGTTCCCGGCGATTCCG ACATGGGTGTCGGCGGCCGTGTTCTTGGTGATTATCTGCGCCGCCAACCTGCTGGGCGTCTCCAAGTTCGGCGAGTTCGA GTTCTGGTTCGCCATTATCAAGATTGTGGCCGTGATCGCCATGATTATCGGCGGCCTGGCCGTCATCATCTTCGCTCTGC CCACCACATCCGGTATCAAAGCGAGCTTTGCCAACTGGTTCACCTTGGAAGGGGGCTTCTTCCCGAACGGTCTCATGGAG CAGACTAAGGACGGCACCTGGACCGGTCTGTTGATGGCGCTTGTCGTGGTGATGTTCAGCTTCGGCGGCACCGAGCTCAT CGGCATCACTGCCGGCGAAACCGAGGACCCTCGTCGTACGATTCCCCGCGCCACCAATGACATTATCTGGCGAATTCTCG TGTTCTACATTGGCGCGCTCGGCGTAATCATGGCCGTAATACCGTGGAACACCATCGGCGGAGACGATGCTCCCAGCCCG TTCGTGCAAATCTTCGATTCCGTGGGCATCCACGCGGCCGCCGGCATCCTCAACTTCGTGTGCCTGACCGCCGTGATGAG CGTCTACAACTCCGGCCTGTACGCCAACTCCCGCATGCTGTATTCGCTGGCCAAGCAAGGCAATGCGCCCGCGTATCTGG GCAAGCTCAACGCTAAGGGCGTGCCGGTGGCCGGCGTGCTGACGTCCGCCGTGATCACCGCCATCGCCGTGGTCGTGGTG TTCGTGTGGCCCGAGTTCGCGTTCAACTATCTGATGTCGATTGCCACCATCGCCGGCATCATCAACTGGACGATGATCAT GTTCACCGAGATGAAGTTCCGTAAGGTGGTCGCCGCGGGCGGCGCTCCCGAGGATTCCGAGCTGGCCGGCAAGTCCGGCA AGGAAGCGCTCGACGCGATTCACTTCAAGCTGCCGTTCGCTAAGGTGACCCCGTGGGTGGTGTTGGCGTTCTTGGCACTG GTGGTGGTGCTCATGTGCTTCTCCGCCAGCTACCGTGTCGCCGTCATCGCCGGCGTGATTTGGCTCGCCATTCTCTTTGC GGCCTACCAGCTCACTCAGGCGAAGAAGTAG
Upstream 100 bases:
>100_bases AACAACACCATGACGGTTGCGCAACCAGCATACGGATCGTGAGTCGCCGGTCTCGCCCAGTGGCGGTGGGCGTTGCCATC ACGCCATACGGCGTTTTACA
Downstream 100 bases:
>100_bases AGTCTCATCTGCGAATAGCTCTCAGAATACGCCGCTTGACATTTGCATCTATGGTCTCATTTGGGTCAAATTCCTCTAGG TAACGCGGGATACCGCCCAG
Product: amino acid permease-associated region
Products: L-tryptophan [Cytoplasm]; Proton [Cytoplasm]; Proton [Cytoplasm]; L-tyrosine [Cytoplasm]; Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: General aromatic amino acid permease [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MAGIVHGGVAIHADSQRNLGKGIMSTNDTSEQPRETDDVPVPATLRKSLKNRHIQLIALGGAIGTGLFYGSSEAIALAGP SILLAYLVGGFAIFMIVRALSEMSVEDPEAGAFSYYATRYWSKRAGFISGWNYWFNYILVSMVELSVVGSFVNYWFPAIP TWVSAAVFLVIICAANLLGVSKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTTSGIKASFANWFTLEGGFFPNGLME QTKDGTWTGLLMALVVVMFSFGGTELIGITAGETEDPRRTIPRATNDIIWRILVFYIGALGVIMAVIPWNTIGGDDAPSP FVQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGKLNAKGVPVAGVLTSAVITAIAVVVV FVWPEFAFNYLMSIATIAGIINWTMIMFTEMKFRKVVAAGGAPEDSELAGKSGKEALDAIHFKLPFAKVTPWVVLAFLAL VVVLMCFSASYRVAVIAGVIWLAILFAAYQLTQAKK
Sequences:
>Translated_516_residues MAGIVHGGVAIHADSQRNLGKGIMSTNDTSEQPRETDDVPVPATLRKSLKNRHIQLIALGGAIGTGLFYGSSEAIALAGP SILLAYLVGGFAIFMIVRALSEMSVEDPEAGAFSYYATRYWSKRAGFISGWNYWFNYILVSMVELSVVGSFVNYWFPAIP TWVSAAVFLVIICAANLLGVSKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTTSGIKASFANWFTLEGGFFPNGLME QTKDGTWTGLLMALVVVMFSFGGTELIGITAGETEDPRRTIPRATNDIIWRILVFYIGALGVIMAVIPWNTIGGDDAPSP FVQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGKLNAKGVPVAGVLTSAVITAIAVVVV FVWPEFAFNYLMSIATIAGIINWTMIMFTEMKFRKVVAAGGAPEDSELAGKSGKEALDAIHFKLPFAKVTPWVVLAFLAL VVVLMCFSASYRVAVIAGVIWLAILFAAYQLTQAKK >Mature_515_residues AGIVHGGVAIHADSQRNLGKGIMSTNDTSEQPRETDDVPVPATLRKSLKNRHIQLIALGGAIGTGLFYGSSEAIALAGPS ILLAYLVGGFAIFMIVRALSEMSVEDPEAGAFSYYATRYWSKRAGFISGWNYWFNYILVSMVELSVVGSFVNYWFPAIPT WVSAAVFLVIICAANLLGVSKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTTSGIKASFANWFTLEGGFFPNGLMEQ TKDGTWTGLLMALVVVMFSFGGTELIGITAGETEDPRRTIPRATNDIIWRILVFYIGALGVIMAVIPWNTIGGDDAPSPF VQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGKLNAKGVPVAGVLTSAVITAIAVVVVF VWPEFAFNYLMSIATIAGIINWTMIMFTEMKFRKVVAAGGAPEDSELAGKSGKEALDAIHFKLPFAKVTPWVVLAFLALV VVLMCFSASYRVAVIAGVIWLAILFAAYQLTQAKK
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of the aromatic amino acids (phenylalanine, tyrosine, and tryptophan) [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=380, Percent_Identity=23.9473684210526, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI258645169, Length=416, Percent_Identity=23.0769230769231, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI258614003, Length=417, Percent_Identity=22.7817745803357, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI258614005, Length=417, Percent_Identity=22.7817745803357, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1786302, Length=469, Percent_Identity=46.6950959488273, Blast_Score=413, Evalue=1e-116, Organism=Escherichia coli, GI1786789, Length=492, Percent_Identity=42.479674796748, Blast_Score=397, Evalue=1e-111, Organism=Escherichia coli, GI1790653, Length=467, Percent_Identity=38.3297644539615, Blast_Score=336, Evalue=2e-93, Organism=Escherichia coli, GI48994972, Length=481, Percent_Identity=39.7089397089397, Blast_Score=326, Evalue=3e-90, Organism=Escherichia coli, GI1786602, Length=472, Percent_Identity=40.2542372881356, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI87081708, Length=475, Percent_Identity=36.2105263157895, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI87081915, Length=456, Percent_Identity=34.8684210526316, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1789017, Length=470, Percent_Identity=35.3191489361702, Blast_Score=278, Evalue=5e-76, Organism=Escherichia coli, GI1788480, Length=426, Percent_Identity=36.3849765258216, Blast_Score=262, Evalue=4e-71, Organism=Escherichia coli, GI87081869, Length=265, Percent_Identity=22.2641509433962, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531343, Length=403, Percent_Identity=24.0694789081886, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324061, Length=451, Percent_Identity=35.0332594235033, Blast_Score=253, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6320772, Length=459, Percent_Identity=32.4618736383442, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6324059, Length=487, Percent_Identity=32.6488706365503, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6322892, Length=460, Percent_Identity=33.0434782608696, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6324924, Length=445, Percent_Identity=31.4606741573034, Blast_Score=209, Evalue=7e-55, Organism=Saccharomyces cerevisiae, GI6324553, Length=409, Percent_Identity=33.7408312958435, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6324990, Length=432, Percent_Identity=31.4814814814815, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319542, Length=509, Percent_Identity=28.6836935166994, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6320251, Length=454, Percent_Identity=30.3964757709251, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320717, Length=436, Percent_Identity=27.9816513761468, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6319824, Length=433, Percent_Identity=27.9445727482679, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321629, Length=426, Percent_Identity=28.6384976525822, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6322967, Length=447, Percent_Identity=28.8590604026846, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6321053, Length=424, Percent_Identity=28.0660377358491, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6319608, Length=436, Percent_Identity=26.1467889908257, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6324981, Length=416, Percent_Identity=30.0480769230769, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319543, Length=407, Percent_Identity=28.2555282555283, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320364, Length=454, Percent_Identity=24.8898678414097, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI24667468, Length=432, Percent_Identity=22.2222222222222, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24666159, Length=432, Percent_Identity=20.8333333333333, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221512776, Length=432, Percent_Identity=20.8333333333333, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 55485; Mature: 55354
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIVHGGVAIHADSQRNLGKGIMSTNDTSEQPRETDDVPVPATLRKSLKNRHIQLIALG CCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC GAIGTGLFYGSSEAIALAGPSILLAYLVGGFAIFMIVRALSEMSVEDPEAGAFSYYATRY CHHHHHHEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WSKRAGFISGWNYWFNYILVSMVELSVVGSFVNYWFPAIPTWVSAAVFLVIICAANLLGV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTTSGIKASFANWFTLEGGFFPNGLME HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCHHH QTKDGTWTGLLMALVVVMFSFGGTELIGITAGETEDPRRTIPRATNDIIWRILVFYIGAL HCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHH GVIMAVIPWNTIGGDDAPSPFVQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRML HHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YSLAKQGNAPAYLGKLNAKGVPVAGVLTSAVITAIAVVVVFVWPEFAFNYLMSIATIAGI HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INWTMIMFTEMKFRKVVAAGGAPEDSELAGKSGKEALDAIHFKLPFAKVTPWVVLAFLAL HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHH VVVLMCFSASYRVAVIAGVIWLAILFAAYQLTQAKK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGIVHGGVAIHADSQRNLGKGIMSTNDTSEQPRETDDVPVPATLRKSLKNRHIQLIALG CCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC GAIGTGLFYGSSEAIALAGPSILLAYLVGGFAIFMIVRALSEMSVEDPEAGAFSYYATRY CHHHHHHEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WSKRAGFISGWNYWFNYILVSMVELSVVGSFVNYWFPAIPTWVSAAVFLVIICAANLLGV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTTSGIKASFANWFTLEGGFFPNGLME HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCHHH QTKDGTWTGLLMALVVVMFSFGGTELIGITAGETEDPRRTIPRATNDIIWRILVFYIGAL HCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHH GVIMAVIPWNTIGGDDAPSPFVQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRML HHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YSLAKQGNAPAYLGKLNAKGVPVAGVLTSAVITAIAVVVVFVWPEFAFNYLMSIATIAGI HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INWTMIMFTEMKFRKVVAAGGAPEDSELAGKSGKEALDAIHFKLPFAKVTPWVVLAFLAL HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHH VVVLMCFSASYRVAVIAGVIWLAILFAAYQLTQAKK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-tryptophan [Periplasm]; Proton [Periplasm]; Proton [Periplasm]; L-tyrosine [Periplasm]; Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: L-tryptophan [Periplasm] + Proton [Periplasm] = L-tryptophan [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] +
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]