| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693275
Identifier: 213693275
GI number: 213693275
Start: 2723960
End: 2724337
Strand: Direct
Name: 213693275
Synonym: Blon_2429
Alternate gene names: NA
Gene position: 2723960-2724337 (Clockwise)
Preceding gene: 213693274
Following gene: 213693277
Centisome position: 96.16
GC content: 61.64
Gene sequence:
>378_bases ATGCGCATGACGAGGGGATTCATCGCCAAAGGACATCGCGGAGGCCGCCATGCCGCTCACCGTTTACGGCATTTGCGGCA GGCGCAACGGTTGCCTCGCCACGCGGCGGCGGCACACTCATCCGAATCCGCATCGCGCGCAATCTCGGATATGACCGCGC CGCCTGAACCACCCATCAGACTTACGCCCGCGGTGGCATGTTCGCCCGATACGGATGTTGCCGTGCTCTGGCACATCGCA TATCACGTGCCCGAACTGCGTAAATGGCTGGTTGCCAATCCCAAAGCCGACGCGCCTTTGCTGGAATTGGTCTCGCAGCG TGGTGGGCCTGGGGTCCGGCAGGCGTTGGAAATATTGTTCGAGTCGATGGAAGCGTAA
Upstream 100 bases:
>100_bases TGCAAATCGTCAAGGAGCATCGGCATCACAAGTATGCCGGACGCGCACGCATGTTTTTTGAATCGGTGCAGAAGGAGATT GACGAACCGGCTTTGGAGCA
Downstream 100 bases:
>100_bases CGGGGAGATAATCGCCGGCTGCTGCGCTATCCCTTGATTTTCAGCACAGCCGCATACACCTGCTTGCGATTGGCCAACGA TCCGTCAGCCAATGGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRMTRGFIAKGHRGGRHAAHRLRHLRQAQRLPRHAAAAHSSESASRAISDMTAPPEPPIRLTPAVACSPDTDVAVLWHIA YHVPELRKWLVANPKADAPLLELVSQRGGPGVRQALEILFESMEA
Sequences:
>Translated_125_residues MRMTRGFIAKGHRGGRHAAHRLRHLRQAQRLPRHAAAAHSSESASRAISDMTAPPEPPIRLTPAVACSPDTDVAVLWHIA YHVPELRKWLVANPKADAPLLELVSQRGGPGVRQALEILFESMEA >Mature_125_residues MRMTRGFIAKGHRGGRHAAHRLRHLRQAQRLPRHAAAAHSSESASRAISDMTAPPEPPIRLTPAVACSPDTDVAVLWHIA YHVPELRKWLVANPKADAPLLELVSQRGGPGVRQALEILFESMEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13743; Mature: 13743
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTRGFIAKGHRGGRHAAHRLRHLRQAQRLPRHAAAAHSSESASRAISDMTAPPEPPIR CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCEE LTPAVACSPDTDVAVLWHIAYHVPELRKWLVANPKADAPLLELVSQRGGPGVRQALEILF ECCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHH ESMEA HHHCC >Mature Secondary Structure MRMTRGFIAKGHRGGRHAAHRLRHLRQAQRLPRHAAAAHSSESASRAISDMTAPPEPPIR CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCEE LTPAVACSPDTDVAVLWHIAYHVPELRKWLVANPKADAPLLELVSQRGGPGVRQALEILF ECCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHH ESMEA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA