| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693270
Identifier: 213693270
GI number: 213693270
Start: 2718890
End: 2719960
Strand: Direct
Name: 213693270
Synonym: Blon_2424
Alternate gene names: NA
Gene position: 2718890-2719960 (Clockwise)
Preceding gene: 213693269
Following gene: 213693274
Centisome position: 95.98
GC content: 57.52
Gene sequence:
>1071_bases ATGAACGACATATTGCCCACTCCACCGCCCGGCGTATTCGACGACGAACCGTCCGGCTGGACCCGGCCCCACACACCGCG CACCATCAATCCTGAGCTACGTTCATCACCACGTATGGTGAGTTCCGCGCCAACTGTGATTACAGGCCCTGTGTCGCCAG CAATGAGCGAAACCCTCACCCAACGTAAGCGGGAAATGCTTAAACGATGCACGGACGCCGCGCTACAGCTCAGGCAACCG GTGCTCTTCGGCATGACCACATCGCTGATACTGCAATCCGTGCCGCTTCCCAAGGATTGCGATATCGACCCCGCCGAGCT CCATACCGTCTCCGACTCACACCGCACACGAATACGTGCCATCGTGCCGCCAACGACACCACACATCTGGAAGCCGCTGA GCGATGCACACAATGTGCGTATCAACAAACATGTGTACGCACTGGATCTGATACACACTTGGGCACAACTCGCCACTCAT ATATCGCTCGAATCGCTGGTCATACTTGGCGACGCAATCCTTACGGCAATCGCCCGCAAGCCGGGTCTGGCGAACGGCCG CACTGCTGACGGCATTTATCAGGACTTCGTGCGGCAAGTCACCGAACTCCCGAAATTCAACGCAAAATCCAAGTGCATGA TCGCTCTTGCATTCATTACGCCCCGCGTGGACTCTCCAATGGAATCAAAGACCCGCATCGCGACGACGAAATACGGGCTT CCGCCAGCCGTGACAAATTACACGGTGCCCGGCGCGACATTCAGCAACGGTGCGCCGATAACGCTCGATCTCGCTTGGCC CGAATTTCGCGTCGCCATCGAATATGACGGCGATCATCATCGCACCGACAAAAACCAGTGGCGGCGAGACAACGACAAGC GCGAACTGTTGCGACATCATCATTGGATCATCATCATCGCCACTGCCGCGAACATGGCCGATGAGCCATCCCAAGCCGAA CTCGCCTACCGGGTCGGGCGGCAGTTGGCATTGCGAGGTGCCGTATTCGATTTCACTTTGACGGCAACGCCACTCGATGA GCTCGCCCGGCGGAGGCGACGAAGAATATAA
Upstream 100 bases:
>100_bases CGAACTAGTTATCCACAGAGTTATCCACATCTCCCGCAAGCTAGAGCCACATACCCCGGTTTTCATAGCGAGCACGTGAC CGCTGCGCTACGGTGGCGTC
Downstream 100 bases:
>100_bases CGTTTATCGCGAAAGTCGTACAGTATCCATGTTGCGCCGACGCTGCGCGACTCGGTGTCCGTGTCCGATGTCCCGGTAGC GATGTCAATCGATTTATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNDILPTPPPGVFDDEPSGWTRPHTPRTINPELRSSPRMVSSAPTVITGPVSPAMSETLTQRKREMLKRCTDAALQLRQP VLFGMTTSLILQSVPLPKDCDIDPAELHTVSDSHRTRIRAIVPPTTPHIWKPLSDAHNVRINKHVYALDLIHTWAQLATH ISLESLVILGDAILTAIARKPGLANGRTADGIYQDFVRQVTELPKFNAKSKCMIALAFITPRVDSPMESKTRIATTKYGL PPAVTNYTVPGATFSNGAPITLDLAWPEFRVAIEYDGDHHRTDKNQWRRDNDKRELLRHHHWIIIIATAANMADEPSQAE LAYRVGRQLALRGAVFDFTLTATPLDELARRRRRRI
Sequences:
>Translated_356_residues MNDILPTPPPGVFDDEPSGWTRPHTPRTINPELRSSPRMVSSAPTVITGPVSPAMSETLTQRKREMLKRCTDAALQLRQP VLFGMTTSLILQSVPLPKDCDIDPAELHTVSDSHRTRIRAIVPPTTPHIWKPLSDAHNVRINKHVYALDLIHTWAQLATH ISLESLVILGDAILTAIARKPGLANGRTADGIYQDFVRQVTELPKFNAKSKCMIALAFITPRVDSPMESKTRIATTKYGL PPAVTNYTVPGATFSNGAPITLDLAWPEFRVAIEYDGDHHRTDKNQWRRDNDKRELLRHHHWIIIIATAANMADEPSQAE LAYRVGRQLALRGAVFDFTLTATPLDELARRRRRRI >Mature_356_residues MNDILPTPPPGVFDDEPSGWTRPHTPRTINPELRSSPRMVSSAPTVITGPVSPAMSETLTQRKREMLKRCTDAALQLRQP VLFGMTTSLILQSVPLPKDCDIDPAELHTVSDSHRTRIRAIVPPTTPHIWKPLSDAHNVRINKHVYALDLIHTWAQLATH ISLESLVILGDAILTAIARKPGLANGRTADGIYQDFVRQVTELPKFNAKSKCMIALAFITPRVDSPMESKTRIATTKYGL PPAVTNYTVPGATFSNGAPITLDLAWPEFRVAIEYDGDHHRTDKNQWRRDNDKRELLRHHHWIIIIATAANMADEPSQAE LAYRVGRQLALRGAVFDFTLTATPLDELARRRRRRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39900; Mature: 39900
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDILPTPPPGVFDDEPSGWTRPHTPRTINPELRSSPRMVSSAPTVITGPVSPAMSETLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHH QRKREMLKRCTDAALQLRQPVLFGMTTSLILQSVPLPKDCDIDPAELHTVSDSHRTRIRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCEEEE IVPPTTPHIWKPLSDAHNVRINKHVYALDLIHTWAQLATHISLESLVILGDAILTAIARK EECCCCCHHHCCCCCCCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGLANGRTADGIYQDFVRQVTELPKFNAKSKCMIALAFITPRVDSPMESKTRIATTKYGL CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC PPAVTNYTVPGATFSNGAPITLDLAWPEFRVAIEYDGDHHRTDKNQWRRDNDKRELLRHH CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHC HWIIIIATAANMADEPSQAELAYRVGRQLALRGAVFDFTLTATPLDELARRRRRRI CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MNDILPTPPPGVFDDEPSGWTRPHTPRTINPELRSSPRMVSSAPTVITGPVSPAMSETLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHH QRKREMLKRCTDAALQLRQPVLFGMTTSLILQSVPLPKDCDIDPAELHTVSDSHRTRIRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCEEEE IVPPTTPHIWKPLSDAHNVRINKHVYALDLIHTWAQLATHISLESLVILGDAILTAIARK EECCCCCHHHCCCCCCCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGLANGRTADGIYQDFVRQVTELPKFNAKSKCMIALAFITPRVDSPMESKTRIATTKYGL CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC PPAVTNYTVPGATFSNGAPITLDLAWPEFRVAIEYDGDHHRTDKNQWRRDNDKRELLRHH CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHC HWIIIIATAANMADEPSQAELAYRVGRQLALRGAVFDFTLTATPLDELARRRRRRI CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA