| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693111
Identifier: 213693111
GI number: 213693111
Start: 2495743
End: 2495928
Strand: Direct
Name: 213693111
Synonym: Blon_2261
Alternate gene names: NA
Gene position: 2495743-2495928 (Clockwise)
Preceding gene: 213693110
Following gene: 213693112
Centisome position: 88.1
GC content: 53.23
Gene sequence:
>186_bases TTGCCTACCTATCATTACCGTTGCAAGAACTGCGACTATGACTTCACCGAACAGCAGTCGTTCAATGACGACCCGATTAC CGTGTGCCCCAAGTGCTCGCAGGAGCAGGTGCACAAGGTGTATTCCGCCGTGCCGATTGAGTTCAAGGGTCACGGATTCT ACCGCACCGACAAATCCGGCAAGTAA
Upstream 100 bases:
>100_bases GTAACGCCAATGTGTCAGGGCGGCGACTAGGATATGAACGGTTGCATGGCATGGTGTTGCACGCCATGCGCGAGAAATAT GACTTTGTTGGAGGAATCCG
Downstream 100 bases:
>100_bases GGTCGGCTCCCCGTTTTCCCTCGGTAAAAGATGGTGTCGACGGCGGTATGCCGCGGATATTGGCACTACGGGCACTGTCT GTTGCACGGGTTTGAAGCGT
Product: regulatory protein, FmdB family
Products: NA
Alternate protein names: Type I Antifreeze Protein; FmdB Family Regulatory Protein
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MPTYHYRCKNCDYDFTEQQSFNDDPITVCPKCSQEQVHKVYSAVPIEFKGHGFYRTDKSGK
Sequences:
>Translated_61_residues MPTYHYRCKNCDYDFTEQQSFNDDPITVCPKCSQEQVHKVYSAVPIEFKGHGFYRTDKSGK >Mature_60_residues PTYHYRCKNCDYDFTEQQSFNDDPITVCPKCSQEQVHKVYSAVPIEFKGHGFYRTDKSGK
Specific function: Unknown
COG id: COG2331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7169; Mature: 7038
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTYHYRCKNCDYDFTEQQSFNDDPITVCPKCSQEQVHKVYSAVPIEFKGHGFYRTDKSG CCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCEEECCCCC K C >Mature Secondary Structure PTYHYRCKNCDYDFTEQQSFNDDPITVCPKCSQEQVHKVYSAVPIEFKGHGFYRTDKSG CCCCCEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCEEECCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA