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The map label for this gene is nagC [H]

Identifier: 213693093

GI number: 213693093

Start: 2473307

End: 2474500

Strand: Direct

Name: nagC [H]

Synonym: Blon_2242

Alternate gene names: 213693093

Gene position: 2473307-2474500 (Clockwise)

Preceding gene: 213693091

Following gene: 213693094

Centisome position: 87.31

GC content: 58.96

Gene sequence:

>1194_bases
ATGAGGGCAATGCCATCGACCGCAGTGAAAGCGCGCAACCGTAGTGCCATGACCCAGTATCTGTATGGCCATAGCCATGT
CACCAAACAGGAACTGGAACGCGAACTCGGTCTCAGCCTGCCCACCATCACCCAAAATCTGCGCGCCCTAGAGGATGACG
GACTCATCCGCAAAGGCGAACTGCAGGATTCCACCGGCGGGCGCAAGGCGCAAAGTTATGAGTTCAATCCCGATCATCGC
ACTGCCATCGGGGTAGTGATGCGGTCCAACGAACTGCGCCTGTGCGCGATTAACCTGTACGGCAACGTCATCGAAAAACG
CAACGAGGCCCTGCCTTACCGCAACACCAACGTTTACTACCAGCGTATCGGCGACATCATCAACAACTTCGCCGCCGACG
TCGAAAAGAAGCACGGCAAGGCGCTCGGCGTCTCGTTCGCCATCCAAGGCATCCTCTCCCCCGACGCCACCACCATCACC
TTCGGCACCATTATGGGCAACACTGGGCTCACGCTCGAAACCATCAGCCAATCGGTCCATTACCCGTGCATGATGATCCA
CGATTCCGATGCCTCAGCCATGGCCGAACTCTGGTTCGACTCCACGCTCACCGATGCGGTGTGCGTCTATCTGGAGCGAC
GCCCGGGCGGCGCGGTGATCGTGGGAGGCAAGCTGTATCAGGGCCCGAACCAGTGCAACGGCGCCATCGAACACATGACG
CTGGTGCCGGGCGGCCGCGAATGCTACTGCGGCCAGCGCGGTTGCATGGACACCTACTGCTCGCCGGAGACCTTGTCCGA
GGATTACGAAAGCATTCCCGGCTTCTTCAGCGTGCTCGAGCAGGGCGAACGGCATCATCGCGAGCGCATGGATGAGTGGC
TGGATTACGTGGCGCAGGCCATCGTCAACGCGCGATCCATCATCGCGGGCGACGTGATTGTCGGCGGTGAAGCAGCCCAG
CATCTTGAAGACAGCGACATCGAGGATCTCAAGGCGCGCGTCATCAATCGTAGCCCGTTCGGCACCGACCATTTCAATCT
GCGCAAAAGCTACCGCGCCGAAGATCAGAACATCATCGGTGCCGCGTTGCGGTTCGCCGAGAATTATCTCGACGATATCT
GTGGTGCTGTGGAACGCGGCAGGAAATCAAGGGCTTCCACCAAAAGTGACAACACGTCTACAATGGAGGTATGA

Upstream 100 bases:

>100_bases
CAAATATACGATTGTTACCTCATAACCTCCGCGTCGAGGCACATGAAAGCCACTTTCATAAAGTACACTTGCATATATCT
CATCGCACAAAGGGGTAACT

Downstream 100 bases:

>100_bases
AAAACCCACCGTTGCATCGTTACGCCACTCGCCCAGGGCTGTACTTCACTGACGACGGTGGGGCTGACGCCGTTGTTCGT
TCCGAAACCGCCGATCAGGT

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRAMPSTAVKARNRSAMTQYLYGHSHVTKQELERELGLSLPTITQNLRALEDDGLIRKGELQDSTGGRKAQSYEFNPDHR
TAIGVVMRSNELRLCAINLYGNVIEKRNEALPYRNTNVYYQRIGDIINNFAADVEKKHGKALGVSFAIQGILSPDATTIT
FGTIMGNTGLTLETISQSVHYPCMMIHDSDASAMAELWFDSTLTDAVCVYLERRPGGAVIVGGKLYQGPNQCNGAIEHMT
LVPGGRECYCGQRGCMDTYCSPETLSEDYESIPGFFSVLEQGERHHRERMDEWLDYVAQAIVNARSIIAGDVIVGGEAAQ
HLEDSDIEDLKARVINRSPFGTDHFNLRKSYRAEDQNIIGAALRFAENYLDDICGAVERGRKSRASTKSDNTSTMEV

Sequences:

>Translated_397_residues
MRAMPSTAVKARNRSAMTQYLYGHSHVTKQELERELGLSLPTITQNLRALEDDGLIRKGELQDSTGGRKAQSYEFNPDHR
TAIGVVMRSNELRLCAINLYGNVIEKRNEALPYRNTNVYYQRIGDIINNFAADVEKKHGKALGVSFAIQGILSPDATTIT
FGTIMGNTGLTLETISQSVHYPCMMIHDSDASAMAELWFDSTLTDAVCVYLERRPGGAVIVGGKLYQGPNQCNGAIEHMT
LVPGGRECYCGQRGCMDTYCSPETLSEDYESIPGFFSVLEQGERHHRERMDEWLDYVAQAIVNARSIIAGDVIVGGEAAQ
HLEDSDIEDLKARVINRSPFGTDHFNLRKSYRAEDQNIIGAALRFAENYLDDICGAVERGRKSRASTKSDNTSTMEV
>Mature_397_residues
MRAMPSTAVKARNRSAMTQYLYGHSHVTKQELERELGLSLPTITQNLRALEDDGLIRKGELQDSTGGRKAQSYEFNPDHR
TAIGVVMRSNELRLCAINLYGNVIEKRNEALPYRNTNVYYQRIGDIINNFAADVEKKHGKALGVSFAIQGILSPDATTIT
FGTIMGNTGLTLETISQSVHYPCMMIHDSDASAMAELWFDSTLTDAVCVYLERRPGGAVIVGGKLYQGPNQCNGAIEHMT
LVPGGRECYCGQRGCMDTYCSPETLSEDYESIPGFFSVLEQGERHHRERMDEWLDYVAQAIVNARSIIAGDVIVGGEAAQ
HLEDSDIEDLKARVINRSPFGTDHFNLRKSYRAEDQNIIGAALRFAENYLDDICGAVERGRKSRASTKSDNTSTMEV

Specific function: Acts as a repressor of the nagEBACD operon and acts both as an activator and a repressor for the transcription of the glmSU operon [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=278, Percent_Identity=24.8201438848921, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787878, Length=265, Percent_Identity=22.2641509433962, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR; PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44050; Mature: 44050

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMPSTAVKARNRSAMTQYLYGHSHVTKQELERELGLSLPTITQNLRALEDDGLIRKGE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCC
LQDSTGGRKAQSYEFNPDHRTAIGVVMRSNELRLCAINLYGNVIEKRNEALPYRNTNVYY
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHH
QRIGDIINNFAADVEKKHGKALGVSFAIQGILSPDATTITFGTIMGNTGLTLETISQSVH
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHCCC
YPCMMIHDSDASAMAELWFDSTLTDAVCVYLERRPGGAVIVGGKLYQGPNQCNGAIEHMT
CCEEEEECCCHHHHHHHHHCCHHHHHHEEEEEECCCCEEEECCEEECCCCHHCCHHHEEE
LVPGGRECYCGQRGCMDTYCSPETLSEDYESIPGFFSVLEQGERHHRERMDEWLDYVAQA
ECCCCCEECCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNARSIIAGDVIVGGEAAQHLEDSDIEDLKARVINRSPFGTDHFNLRKSYRAEDQNIIG
HHHHHHHHCCCEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHH
AALRFAENYLDDICGAVERGRKSRASTKSDNTSTMEV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRAMPSTAVKARNRSAMTQYLYGHSHVTKQELERELGLSLPTITQNLRALEDDGLIRKGE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCC
LQDSTGGRKAQSYEFNPDHRTAIGVVMRSNELRLCAINLYGNVIEKRNEALPYRNTNVYY
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHH
QRIGDIINNFAADVEKKHGKALGVSFAIQGILSPDATTITFGTIMGNTGLTLETISQSVH
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHCCC
YPCMMIHDSDASAMAELWFDSTLTDAVCVYLERRPGGAVIVGGKLYQGPNQCNGAIEHMT
CCEEEEECCCHHHHHHHHHCCHHHHHHEEEEEECCCCEEEECCEEECCCCHHCCHHHEEE
LVPGGRECYCGQRGCMDTYCSPETLSEDYESIPGFFSVLEQGERHHRERMDEWLDYVAQA
ECCCCCEECCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNARSIIAGDVIVGGEAAQHLEDSDIEDLKARVINRSPFGTDHFNLRKSYRAEDQNIIG
HHHHHHHHCCCEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHH
AALRFAENYLDDICGAVERGRKSRASTKSDNTSTMEV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]