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The map label for this gene is tnpR [H]

Identifier: 213693007

GI number: 213693007

Start: 2378943

End: 2379269

Strand: Direct

Name: tnpR [H]

Synonym: Blon_2154

Alternate gene names: 213693007

Gene position: 2378943-2379269 (Clockwise)

Preceding gene: 213693004

Following gene: 213693011

Centisome position: 83.98

GC content: 59.63

Gene sequence:

>327_bases
GTGATCGTCTCGCCCATCAGCATCAAGGGCGGGGCGGCAAAACGACCGTTACGGCACTTCGACACCAGGAGCGCCAACGA
ACGGCTTGTGTTCAATCTGTTCGGCAGCTTCGCCCAGTTCGAACGCGACCTGATCAGCAAACGCACCAAGGCCGGACTCC
AGGCCGCCAGGAGCCGGGACCATCAGGGAGGCCGGCCAGCCGCGCTCGACGACAAACAGCGTAAAGAACTCCGACGGCTC
CACAGGAAGGGCGACCTTACCATACGGCAGCTATGCGAACTGTTCGCCATCTCCAAAACCACACTCTACCGAAACCTCAA
ACAATAA

Upstream 100 bases:

>100_bases
TCCGGGCTCTCACGGCAGCTAGAACACAAGCTGTTCCAGCTGCCACTTTCGACGTTCCGCCAAATGCTCTATTTATTTAG
AAATACACTTCGGAGGGTGC

Downstream 100 bases:

>100_bases
GCTGATTGGTTCCATGCCGTGAATGAAAAGAATTATAATCGGTCAGTGCTATGAGACGCTTTTGAAGCGTATCCCTCCGT
GGCCTATAGTTATAGCCGGA

Product: Resolvase helix-turn-helix domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIVSPISIKGGAAKRPLRHFDTRSANERLVFNLFGSFAQFERDLISKRTKAGLQAARSRDHQGGRPAALDDKQRKELRRL
HRKGDLTIRQLCELFAISKTTLYRNLKQ

Sequences:

>Translated_108_residues
MIVSPISIKGGAAKRPLRHFDTRSANERLVFNLFGSFAQFERDLISKRTKAGLQAARSRDHQGGRPAALDDKQRKELRRL
HRKGDLTIRQLCELFAISKTTLYRNLKQ
>Mature_108_residues
MIVSPISIKGGAAKRPLRHFDTRSANERLVFNLFGSFAQFERDLISKRTKAGLQAARSRDHQGGRPAALDDKQRKELRRL
HRKGDLTIRQLCELFAISKTTLYRNLKQ

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 12390; Mature: 12390

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSPISIKGGAAKRPLRHFDTRSANERLVFNLFGSFAQFERDLISKRTKAGLQAARSRD
CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HQGGRPAALDDKQRKELRRLHRKGDLTIRQLCELFAISKTTLYRNLKQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVSPISIKGGAAKRPLRHFDTRSANERLVFNLFGSFAQFERDLISKRTKAGLQAARSRD
CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HQGGRPAALDDKQRKELRRLHRKGDLTIRQLCELFAISKTTLYRNLKQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2170815; 2555186 [H]