| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is phoU1 [H]
Identifier: 213693004
GI number: 213693004
Start: 2376629
End: 2377303
Strand: Direct
Name: phoU1 [H]
Synonym: Blon_2151
Alternate gene names: 213693004
Gene position: 2376629-2377303 (Clockwise)
Preceding gene: 213693002
Following gene: 213693007
Centisome position: 83.9
GC content: 64.0
Gene sequence:
>675_bases ATGCGCGTTATTTTCAACGAGGAGCTGAAGCAGGTTGCCGATGACCTCGACCGTATGGCGCAGGACGTGCGCAAGGCGAT CAACGGCGCCGGGGAAGCCCTGCTGAACCAGGACATTGAGGCCGCACAGACTGTGATTGACGGCGACATCGAGATCGACG CCCTGGAGTCCTCCGTGATCGACCAGTGCGTCAAGCTTCTCGCCAAGCAGAACCCGGTGGCCACCGATCTGCGTGTGGTC GTTTCCACCATGCGTCTGGCTTCCACGTTCGAGCGTATGGGCGATCTTGCCCGCCACGTGGCCGAGGCCGCCCGCCGCAC CTATCCCGCCGCCGCGATTCCTGAATCCGCTCAGCCGGTGTTCGCCGAGATGATCGACTTCCTGGACAACACCGCTGACC AGCTGGTGGCTATGCTCTCCGATCGCGATGCCAAGACCGCCGAGGCCATCATCCTGGCCGACGACAAGCTGGACAACCTG CACCACCAGACCTTCGATCTGGCGCTGTCCGATGACATCACCCGCCAGCAGACCGTGGACATCGTGCTGCTGGGCCGTTT CCTGGAGCGCCTCGGCGATCACGCCGTGTCCGCCGCCCGCCGTGTGGTGTACATCGTCTCCGGTTTCGACCCCACCAAGG AACCGGCCCGCGACGAGGGCACCGACATCGACTGA
Upstream 100 bases:
>100_bases AACAACTTGAGGTTGCCATTACCTACGTTGAAGTGGGGAGCAAGTACTGGAATAATACACTGGTACAGGTTGCAGTAAGC AAGCATGAAAGGCTAGAGAA
Downstream 100 bases:
>100_bases TTGGTGGCCTGTCCTCACATTGGGCGAATAACTGAACACTTGTCCTCCTATGGTTTGAGGAGGATGCCCGAAAGCGGCGA TCCGGCTACGGCTGGACGCC
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRVIFNEELKQVADDLDRMAQDVRKAINGAGEALLNQDIEAAQTVIDGDIEIDALESSVIDQCVKLLAKQNPVATDLRVV VSTMRLASTFERMGDLARHVAEAARRTYPAAAIPESAQPVFAEMIDFLDNTADQLVAMLSDRDAKTAEAIILADDKLDNL HHQTFDLALSDDITRQQTVDIVLLGRFLERLGDHAVSAARRVVYIVSGFDPTKEPARDEGTDID
Sequences:
>Translated_224_residues MRVIFNEELKQVADDLDRMAQDVRKAINGAGEALLNQDIEAAQTVIDGDIEIDALESSVIDQCVKLLAKQNPVATDLRVV VSTMRLASTFERMGDLARHVAEAARRTYPAAAIPESAQPVFAEMIDFLDNTADQLVAMLSDRDAKTAEAIILADDKLDNL HHQTFDLALSDDITRQQTVDIVLLGRFLERLGDHAVSAARRVVYIVSGFDPTKEPARDEGTDID >Mature_224_residues MRVIFNEELKQVADDLDRMAQDVRKAINGAGEALLNQDIEAAQTVIDGDIEIDALESSVIDQCVKLLAKQNPVATDLRVV VSTMRLASTFERMGDLARHVAEAARRTYPAAAIPESAQPVFAEMIDFLDNTADQLVAMLSDRDAKTAEAIILADDKLDNL HHQTFDLALSDDITRQQTVDIVLLGRFLERLGDHAVSAARRVVYIVSGFDPTKEPARDEGTDID
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=208, Percent_Identity=25.4807692307692, Blast_Score=77, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24644; Mature: 24644
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIFNEELKQVADDLDRMAQDVRKAINGAGEALLNQDIEAAQTVIDGDIEIDALESSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DQCVKLLAKQNPVATDLRVVVSTMRLASTFERMGDLARHVAEAARRTYPAAAIPESAQPV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FAEMIDFLDNTADQLVAMLSDRDAKTAEAIILADDKLDNLHHQTFDLALSDDITRQQTVD HHHHHHHHHCHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH IVLLGRFLERLGDHAVSAARRVVYIVSGFDPTKEPARDEGTDID HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRVIFNEELKQVADDLDRMAQDVRKAINGAGEALLNQDIEAAQTVIDGDIEIDALESSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DQCVKLLAKQNPVATDLRVVVSTMRLASTFERMGDLARHVAEAARRTYPAAAIPESAQPV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FAEMIDFLDNTADQLVAMLSDRDAKTAEAIILADDKLDNLHHQTFDLALSDDITRQQTVD HHHHHHHHHCHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH IVLLGRFLERLGDHAVSAARRVVYIVSGFDPTKEPARDEGTDID HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]