Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692991

Identifier: 213692991

GI number: 213692991

Start: 2364381

End: 2365604

Strand: Direct

Name: 213692991

Synonym: Blon_2138

Alternate gene names: NA

Gene position: 2364381-2365604 (Clockwise)

Preceding gene: 213692990

Following gene: 213692992

Centisome position: 83.47

GC content: 64.46

Gene sequence:

>1224_bases
ATGATGAGCATGAATGTGTGGAAGCGTGCCACGTTGGCGATCGTACGCAAGCCGGTACGCAGCGGCATCATCGGTCTGCT
GATGCTGATGGTCTTCACGAGCCTGGTGGCGCAGGTCGGAGTCTCGACGGCCCTGCGTACCATGTCCGACAGCATCGGCG
CGGGCATGGGCATAGGGTTTACCGTCAGCGCCGGCGAGAATCCCATCAGCGCCGAGGAAGCGAGCCGGTTCTCGCATATC
CCCGGTGTGACGAAGACCGCCTATGCGACGAAGACCTTGGCGCAGGTGGATGGCGCGCGCCCGGTCATGCCCCGGCAGGG
CCCCCGGCTGGACTCCGATCTGGCCATGCAGGTCAGCGTGCTGGGCACCACCGATTCCTCATTGTCCGAGGAATTCCAGA
GCGGCCTGTACCGCCTGGAGCAGGGCCGCCATATCTCGGGCGACGGCGACAACGTGCTGGTCCACCGCGACTTCGCGTTG
CAGAACGGCCTATCGGTCGGCTCGACATTCCGTCTCCGGCAGGAGGGGCGCAACGCCACGGTGCGTGTGGCCGGGATCTT
CTCCGGCAACGTGCAGGCCCAAAGCCCCCTGCCCTCGGACACTTCCGAGAACCTCATCTATTCGGGCAGGCGAGTGACCT
CCGCTCTGACCGGCAACGACCGGATCGGCATGATCCGATGCCTGTCGGATAATCCGCAGGACCTGTCCGCGGCGGTCAGT
CAGGCCAAGACCATGGCCGGTGGCAAGTATGACGTCACCGACGATTCGGCCCGGCTCTCCGGCGTCCTGCAATCCGTGCA
GACGGTGCGTGATCTGGTGCGCATGGTGCTGCTGTCCGTCTGCCTCGCGGACGTACTGGTGCTGGCGATGGCGCTGGTCT
TCTGGATTCGCTCACGCATCCATGAGATAGGCACGCTTCTGGCCCTCGGCATCGACAAGATGCGGATAGTCGCACAACTC
GCCATCGAAACCGGACTCATGGCGGCGGTCGCCGCCCTGTGTTCGCTGGGCACCGGCGCCATGCTGTCGGGATACGTGTC
TTCCCGACTGTTGCGCGATTCGGGCGTCGCGCCGTTGGAATCGTTGCACGTGGAGGCCTTGCCGCCTGAGCAGACGGTGC
TCATCCTGCTGCTCGGATGCGCGGTCATCGCCGTGGCCCTTGCCGTGTCATGCGCCGCCGTGCTGTCCAAATCCCCGAAA
TCCATTCTTTCCTCTATGCGTTAG

Upstream 100 bases:

>100_bases
TGTACGTGGCGCTCGGCCTGCTGGCGGTGATGCTGGTGTGCGTCGCGGTGGCGTGCATGCCGATGCTGCGTAAATCGCCG
CGAGACCTGTCGGAGATTCG

Downstream 100 bases:

>100_bases
GAGTCACCAATCATGTCTAACTGTCTGCAACTGGACCATGTCGATTACGCCTACGGCGCGGCGAAGATCCTTGTTCTCTC
GGATGTCAGCGCGGATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Efflux ABC Transporter Permease Protein; Peptide ABC Transporter Permease; ABC Transporter Permease; ABC Transporter; Permease; ABC Transporter Membrane Protein; Multidrug ABC Transporter Permease Protein; ABC Transporter Permease Protein

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MMSMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALRTMSDSIGAGMGIGFTVSAGENPISAEEASRFSHI
PGVTKTAYATKTLAQVDGARPVMPRQGPRLDSDLAMQVSVLGTTDSSLSEEFQSGLYRLEQGRHISGDGDNVLVHRDFAL
QNGLSVGSTFRLRQEGRNATVRVAGIFSGNVQAQSPLPSDTSENLIYSGRRVTSALTGNDRIGMIRCLSDNPQDLSAAVS
QAKTMAGGKYDVTDDSARLSGVLQSVQTVRDLVRMVLLSVCLADVLVLAMALVFWIRSRIHEIGTLLALGIDKMRIVAQL
AIETGLMAAVAALCSLGTGAMLSGYVSSRLLRDSGVAPLESLHVEALPPEQTVLILLLGCAVIAVALAVSCAAVLSKSPK
SILSSMR

Sequences:

>Translated_407_residues
MMSMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALRTMSDSIGAGMGIGFTVSAGENPISAEEASRFSHI
PGVTKTAYATKTLAQVDGARPVMPRQGPRLDSDLAMQVSVLGTTDSSLSEEFQSGLYRLEQGRHISGDGDNVLVHRDFAL
QNGLSVGSTFRLRQEGRNATVRVAGIFSGNVQAQSPLPSDTSENLIYSGRRVTSALTGNDRIGMIRCLSDNPQDLSAAVS
QAKTMAGGKYDVTDDSARLSGVLQSVQTVRDLVRMVLLSVCLADVLVLAMALVFWIRSRIHEIGTLLALGIDKMRIVAQL
AIETGLMAAVAALCSLGTGAMLSGYVSSRLLRDSGVAPLESLHVEALPPEQTVLILLLGCAVIAVALAVSCAAVLSKSPK
SILSSMR
>Mature_407_residues
MMSMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALRTMSDSIGAGMGIGFTVSAGENPISAEEASRFSHI
PGVTKTAYATKTLAQVDGARPVMPRQGPRLDSDLAMQVSVLGTTDSSLSEEFQSGLYRLEQGRHISGDGDNVLVHRDFAL
QNGLSVGSTFRLRQEGRNATVRVAGIFSGNVQAQSPLPSDTSENLIYSGRRVTSALTGNDRIGMIRCLSDNPQDLSAAVS
QAKTMAGGKYDVTDDSARLSGVLQSVQTVRDLVRMVLLSVCLADVLVLAMALVFWIRSRIHEIGTLLALGIDKMRIVAQL
AIETGLMAAVAALCSLGTGAMLSGYVSSRLLRDSGVAPLESLHVEALPPEQTVLILLLGCAVIAVALAVSCAAVLSKSPK
SILSSMR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42986; Mature: 42986

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALRTMSDSIGAGMGIGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
TVSAGENPISAEEASRFSHIPGVTKTAYATKTLAQVDGARPVMPRQGPRLDSDLAMQVSV
EEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE
LGTTDSSLSEEFQSGLYRLEQGRHISGDGDNVLVHRDFALQNGLSVGSTFRLRQEGRNAT
EECCCHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECHHHHCCCCCCCCHHHHHCCCCCE
VRVAGIFSGNVQAQSPLPSDTSENLIYSGRRVTSALTGNDRIGMIRCLSDNPQDLSAAVS
EEEEEEEECCCEECCCCCCCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
QAKTMAGGKYDVTDDSARLSGVLQSVQTVRDLVRMVLLSVCLADVLVLAMALVFWIRSRI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEIGTLLALGIDKMRIVAQLAIETGLMAAVAALCSLGTGAMLSGYVSSRLLRDSGVAPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
SLHVEALPPEQTVLILLLGCAVIAVALAVSCAAVLSKSPKSILSSMR
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MMSMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALRTMSDSIGAGMGIGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
TVSAGENPISAEEASRFSHIPGVTKTAYATKTLAQVDGARPVMPRQGPRLDSDLAMQVSV
EEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE
LGTTDSSLSEEFQSGLYRLEQGRHISGDGDNVLVHRDFALQNGLSVGSTFRLRQEGRNAT
EECCCHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECHHHHCCCCCCCCHHHHHCCCCCE
VRVAGIFSGNVQAQSPLPSDTSENLIYSGRRVTSALTGNDRIGMIRCLSDNPQDLSAAVS
EEEEEEEECCCEECCCCCCCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
QAKTMAGGKYDVTDDSARLSGVLQSVQTVRDLVRMVLLSVCLADVLVLAMALVFWIRSRI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEIGTLLALGIDKMRIVAQLAIETGLMAAVAALCSLGTGAMLSGYVSSRLLRDSGVAPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
SLHVEALPPEQTVLILLLGCAVIAVALAVSCAAVLSKSPKSILSSMR
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA