| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692965
Identifier: 213692965
GI number: 213692965
Start: 2331689
End: 2332159
Strand: Direct
Name: 213692965
Synonym: Blon_2111
Alternate gene names: NA
Gene position: 2331689-2332159 (Clockwise)
Preceding gene: 213692955
Following gene: 213692968
Centisome position: 82.31
GC content: 63.06
Gene sequence:
>471_bases ATGGGGAAAGTATATTCGCACCTGTCGGAAGAGGAACGCCAGGTCATCCAGATCGAGGTCGGCAACGGCACGAGCGTCAG GAAGATGGCCCGTTTGCCGGGACGCAGCCCGTTCAGCATCAGCCGGGAGATCAAGCGCAACACATGGTTCCCGTCCAACG AGAGCGAGTCCTACCGGCCGTACCGGCCGAAGCGTCTGAAGACGGGCCCGTGGACGGGCCGGTATCACATCGCCGACTCC TACGGTTCCCGGCGGCGGGGCGGCGATGAGAACCGCAACGGCATCATCCGCCGCTGCCTGCCCAAACGCACGATCATCGA ACCCGGTATGGCAAGAGGGCTCCGGGAGATCGTCGACGAGACCGACGACCGGCCCATGCGCGTGCTCGGCCACCGCACGC CCGCCGAGGCATTCGCCGACGAACTGCTAGAATCAGCCGAAAACAAGGATGCTGCACTTACAAATAGATAA
Upstream 100 bases:
>100_bases CATATTGTTATCCTACCTTTCACCCGTTGTCTAATTGAAAGTGCAACATCCGTTAGATTGGAGATTGTCCAGAAAACCAG TCCGAAGGGATGTTGCACCT
Downstream 100 bases:
>100_bases CGGGTATATTTGAACGAGACTATCTTCCGCATCTGGAAGTATGAAGTGTAGATACCCGTATCACAAATAAACACTCATAC CGTATAAGCATACTGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: IS30 Family Transposase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MGKVYSHLSEEERQVIQIEVGNGTSVRKMARLPGRSPFSISREIKRNTWFPSNESESYRPYRPKRLKTGPWTGRYHIADS YGSRRRGGDENRNGIIRRCLPKRTIIEPGMARGLREIVDETDDRPMRVLGHRTPAEAFADELLESAENKDAALTNR
Sequences:
>Translated_156_residues MGKVYSHLSEEERQVIQIEVGNGTSVRKMARLPGRSPFSISREIKRNTWFPSNESESYRPYRPKRLKTGPWTGRYHIADS YGSRRRGGDENRNGIIRRCLPKRTIIEPGMARGLREIVDETDDRPMRVLGHRTPAEAFADELLESAENKDAALTNR >Mature_155_residues GKVYSHLSEEERQVIQIEVGNGTSVRKMARLPGRSPFSISREIKRNTWFPSNESESYRPYRPKRLKTGPWTGRYHIADSY GSRRRGGDENRNGIIRRCLPKRTIIEPGMARGLREIVDETDDRPMRVLGHRTPAEAFADELLESAENKDAALTNR
Specific function: Unknown
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17925; Mature: 17794
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVYSHLSEEERQVIQIEVGNGTSVRKMARLPGRSPFSISREIKRNTWFPSNESESYRP CCHHHHHHCHHCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCC YRPKRLKTGPWTGRYHIADSYGSRRRGGDENRNGIIRRCLPKRTIIEPGMARGLREIVDE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHCCCHHHHHHHHHHHC TDDRPMRVLGHRTPAEAFADELLESAENKDAALTNR CCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GKVYSHLSEEERQVIQIEVGNGTSVRKMARLPGRSPFSISREIKRNTWFPSNESESYRP CHHHHHHCHHCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCC YRPKRLKTGPWTGRYHIADSYGSRRRGGDENRNGIIRRCLPKRTIIEPGMARGLREIVDE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHCCCHHHHHHHHHHHC TDDRPMRVLGHRTPAEAFADELLESAENKDAALTNR CCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA