| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692956
Identifier: 213692956
GI number: 213692956
Start: 2322626
End: 2323687
Strand: Reverse
Name: 213692956
Synonym: Blon_2102
Alternate gene names: NA
Gene position: 2323687-2322626 (Counterclockwise)
Preceding gene: 213692957
Following gene: 213692954
Centisome position: 82.03
GC content: 64.03
Gene sequence:
>1062_bases ATGTACCTGGCGGGCGCGAGCACCCGGCAGGTGGACGACACCGGCCGGCTGTTGTGGGGCGATCGCATGCCCTCGCGGAC GCTCTCCGACAAGTTCAAGCGCTTCTATGGGGAGATGGACCAGTGGCGCAACAGGCCGTTGGAGGGCGAATGGCCGTACG TGTTCGTGGACGGCGTGTGGCACAAGCGATCATGGGGCGGGCGAGTGGAGAACGTGAGCGTGCTCGTCGCCATCGGCATC GGCATGGATGGTCACCGTGAGGTGCTCGGCGTCGCCGAGGGCATGAAGGAGGATTCCGCCAGCTGGGAGCAGTTCGTCCG CTCCATGATTGAACGCGGCCTCAAGGGCGTGCGCCTGGTGGTCGGCGACCGGTACGCCGGACTCGTCGCCACGGTCGGCT CGATGCTGCCCGAGGCGAGGTACCAGCGGTGTATGGTGCGTTTCATGCGCGACGTGCTCTCCAAGGTGCCGCCCGGACAC AGGGAATGGACGTCGGCGGCCCTGAAGGCCGTGTTCGCCATGGAGTCCTGGGAATCCGCGCTGGACAAGGCCGAGACCGT CGCCGCGGAGATGGAGGCCAGGAGGCTGAAGGCCGCCGCCAACTGCCTGCGGGAGGGTATCGGCGAGACCGTGACCTACC TGCTGCCCGGGTTCCCGGACTGGCACCGCAGGCGCATCCGCACGAACGACATGATCGAACGGCTCAACCGGGAGATCAGG CGGCGCACGCGCGTCGTGGGAAGCTTCCCGGACGGGAACAGCGCCCTCATGCTCATATGCGCCCGCATCAGGTACGTCAC CGCGAACGAATGGTCCAACCGGCGTTACCTTGACATGTCCCGGCTCGATGACAGTCTCATGGAAGCGAACCGGTCATCGC GCCATGGACGGCCACGATCCAAAGTGCGCAACCTTTCGGGCACTACCGTTTCGGCAAGGTCGACAGCCTCATCGCCATGG TCAAACTCAGATACAGCGGGCTGCCGATTCGCCTACCGGCGCCCGTCACCTGATCCACGAAAACTGCAATTGACTCTTAA TTTTTTTTATCAAATGATGTAA
Upstream 100 bases:
>100_bases GAGCCGAAGGTGCCGAAACCGGAGGGCGCGGTCTTCGGGTCGGCGGTGATCGAACGATACCGGCGGTGCGAGCAGGGGCA TCGAGGAACCATTGATCGAC
Downstream 100 bases:
>100_bases TCGATTGCTGAATATAGCATATGACAATGGTGAAAATATTAAGCAAAATAGTACTTTTGTCTTTTCAAACCAAGACATTG GTGATTTAAAGCATATAGGA
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MYLAGASTRQVDDTGRLLWGDRMPSRTLSDKFKRFYGEMDQWRNRPLEGEWPYVFVDGVWHKRSWGGRVENVSVLVAIGI GMDGHREVLGVAEGMKEDSASWEQFVRSMIERGLKGVRLVVGDRYAGLVATVGSMLPEARYQRCMVRFMRDVLSKVPPGH REWTSAALKAVFAMESWESALDKAETVAAEMEARRLKAAANCLREGIGETVTYLLPGFPDWHRRRIRTNDMIERLNREIR RRTRVVGSFPDGNSALMLICARIRYVTANEWSNRRYLDMSRLDDSLMEANRSSRHGRPRSKVRNLSGTTVSARSTASSPW SNSDTAGCRFAYRRPSPDPRKLQLTLNFFYQMM
Sequences:
>Translated_353_residues MYLAGASTRQVDDTGRLLWGDRMPSRTLSDKFKRFYGEMDQWRNRPLEGEWPYVFVDGVWHKRSWGGRVENVSVLVAIGI GMDGHREVLGVAEGMKEDSASWEQFVRSMIERGLKGVRLVVGDRYAGLVATVGSMLPEARYQRCMVRFMRDVLSKVPPGH REWTSAALKAVFAMESWESALDKAETVAAEMEARRLKAAANCLREGIGETVTYLLPGFPDWHRRRIRTNDMIERLNREIR RRTRVVGSFPDGNSALMLICARIRYVTANEWSNRRYLDMSRLDDSLMEANRSSRHGRPRSKVRNLSGTTVSARSTASSPW SNSDTAGCRFAYRRPSPDPRKLQLTLNFFYQMM >Mature_353_residues MYLAGASTRQVDDTGRLLWGDRMPSRTLSDKFKRFYGEMDQWRNRPLEGEWPYVFVDGVWHKRSWGGRVENVSVLVAIGI GMDGHREVLGVAEGMKEDSASWEQFVRSMIERGLKGVRLVVGDRYAGLVATVGSMLPEARYQRCMVRFMRDVLSKVPPGH REWTSAALKAVFAMESWESALDKAETVAAEMEARRLKAAANCLREGIGETVTYLLPGFPDWHRRRIRTNDMIERLNREIR RRTRVVGSFPDGNSALMLICARIRYVTANEWSNRRYLDMSRLDDSLMEANRSSRHGRPRSKVRNLSGTTVSARSTASSPW SNSDTAGCRFAYRRPSPDPRKLQLTLNFFYQMM
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 40459; Mature: 40459
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLAGASTRQVDDTGRLLWGDRMPSRTLSDKFKRFYGEMDQWRNRPLEGEWPYVFVDGVW CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCE HKRSWGGRVENVSVLVAIGIGMDGHREVLGVAEGMKEDSASWEQFVRSMIERGLKGVRLV ECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEE VGDRYAGLVATVGSMLPEARYQRCMVRFMRDVLSKVPPGHREWTSAALKAVFAMESWESA ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LDKAETVAAEMEARRLKAAANCLREGIGETVTYLLPGFPDWHRRRIRTNDMIERLNREIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH RRTRVVGSFPDGNSALMLICARIRYVTANEWSNRRYLDMSRLDDSLMEANRSSRHGRPRS HHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHHHHCCHHHCCCCCHH KVRNLSGTTVSARSTASSPWSNSDTAGCRFAYRRPSPDPRKLQLTLNFFYQMM HHHCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHCC >Mature Secondary Structure MYLAGASTRQVDDTGRLLWGDRMPSRTLSDKFKRFYGEMDQWRNRPLEGEWPYVFVDGVW CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCE HKRSWGGRVENVSVLVAIGIGMDGHREVLGVAEGMKEDSASWEQFVRSMIERGLKGVRLV ECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEE VGDRYAGLVATVGSMLPEARYQRCMVRFMRDVLSKVPPGHREWTSAALKAVFAMESWESA ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LDKAETVAAEMEARRLKAAANCLREGIGETVTYLLPGFPDWHRRRIRTNDMIERLNREIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH RRTRVVGSFPDGNSALMLICARIRYVTANEWSNRRYLDMSRLDDSLMEANRSSRHGRPRS HHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHHHHCCHHHCCCCCHH KVRNLSGTTVSARSTASSPWSNSDTAGCRFAYRRPSPDPRKLQLTLNFFYQMM HHHCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7768811; 11481430 [H]