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The map label for this gene is ywqD [H]

Identifier: 213692938

GI number: 213692938

Start: 2299397

End: 2300815

Strand: Reverse

Name: ywqD [H]

Synonym: Blon_2082

Alternate gene names: 213692938

Gene position: 2300815-2299397 (Counterclockwise)

Preceding gene: 213692941

Following gene: 213692937

Centisome position: 81.22

GC content: 58.42

Gene sequence:

>1419_bases
TTGACCATCGCTGATTTGCTGCAGATTGTTCGCAAGCATCTCGCGTCTGCGATTATCTCGTTCGTGGTGGTGTTTGCTGC
AGTCGCAGCTGTCACATTCATCATGCCGCCGAAGTACACGGCTACGGCTGAAGTGTTCGCCACGTATGCCGGTCAGTCCG
GTGAGACGCAGACTACCAACGATATGAGCTCTGGTGCCAATTATTTGAATACCCAGATCACGACGTATCCGGAACTGGTG
AAGACCGAAGCCGTGCTCCAGCCCGTCATTAAGGACCTCGGTCTGGATATGACCACGACCGATCTTGCCGATGTGGTGAC
CGCTACGAACCCCACGAACACGTTCATGGTGGATATCTCGGCGGAAGTCGGCGATCCGCAGCAAGCGGCCGACATCGCCA
ACAGCGTGGCGAAGAACCTGGCCGATCAGGTTTCTTCCGACCTGTACAACAACTCCTCTTCCAGCGACTCTCCCATCAAG
CTCACGGTAGTGCAGAAGGCTCAGACTCCTACCGGGCAGAGCTCCCCGAACATTCCGCTGTATCTGGCCGCGGGCCTGAT
TCTCGGCCTCATCGTAGGCATTGGCGTTGCCCTGCTGAAGGACATCCTCAACACCAAGGTGGACTCCACCGATGACGTGC
GCGAACTGACCCACGCCTCTTCGCTGGGTGCCGTGCCGCAGGCTGCGATTCTTGACGACAGCCGCCCGGTCGTGGTTGCT
CAGCCGGCCGGTAGCGAGGCCGAGGAATTCCGTCGTATTCGCACGAACCTTTCGTTCCTTACCACCACCGCCACGCAGGG
TCATGGCCGACTGCTGGTCATCACCTCTACCGATCCGTCCGAAGGTAAGACGACGGTTTCCTGCAACGTTGCCGTGGCTC
TCGCCGAGGAAGGCAAGAGTGTGCTGCTTATCGACGCCGATCTGCGCCACCCGTCCGTGGCCCACAAACTCGGCATCGAA
GGCCACGTGGGCCTGTCTCACGTGCTGTCTCGCCAGGCGTCCCCAGCCGATGTCATCCAGAAGTACTGGAAGCCGAACCT
GCACATCATGCCTGCCGGCAAGCGCCCGGCTAACGCCAGCATCTTGCTGAACTCCGATCTCATGAAGGAAATGGTCGAGC
AGGCCCTCACCCAGTACGATTACGTGATTATTGATACTGCTCCGCTGTCCGTGGCCAGCGACGCCACCGTATTCGGTCGT
ATGGCCGGTGGTCTGGTGCTCGTGACCGGTAAGGGCGTTGTGGAGAAGAAGGAGCTGAGAAGCACCGCTACGGCTCTGCA
GACCGCCGAAGTGCCGATTCTCGGCTTCATCTTCAACTTCGCTGATCCGAAGAAGATGCACTCGAAGAACTATTATTACT
ACTATTACGAGGACGGCAACAAGCGCAGATCTCATAAGGGCGCCAAGAGCAAGGGCTAG

Upstream 100 bases:

>100_bases
TGGTCATTGTTCACAAGGATACAAAAGCTCGAGAAGTTCCCCGGTAGGTGCTAAATTATAGACCATCTGTGAAAATTTCC
CGAAGAGGTAAGGAAGAACA

Downstream 100 bases:

>100_bases
GGCAAGAAGGAAGGCCGCAAGTAGTAGTTTCGGCGTTTGCCTATTGTCTTGCAATATGAACCGTGCGGTGCTTCTGTGCC
GCACGGTTTTACTGTTAAAG

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MTIADLLQIVRKHLASAIISFVVVFAAVAAVTFIMPPKYTATAEVFATYAGQSGETQTTNDMSSGANYLNTQITTYPELV
KTEAVLQPVIKDLGLDMTTTDLADVVTATNPTNTFMVDISAEVGDPQQAADIANSVAKNLADQVSSDLYNNSSSSDSPIK
LTVVQKAQTPTGQSSPNIPLYLAAGLILGLIVGIGVALLKDILNTKVDSTDDVRELTHASSLGAVPQAAILDDSRPVVVA
QPAGSEAEEFRRIRTNLSFLTTTATQGHGRLLVITSTDPSEGKTTVSCNVAVALAEEGKSVLLIDADLRHPSVAHKLGIE
GHVGLSHVLSRQASPADVIQKYWKPNLHIMPAGKRPANASILLNSDLMKEMVEQALTQYDYVIIDTAPLSVASDATVFGR
MAGGLVLVTGKGVVEKKELRSTATALQTAEVPILGFIFNFADPKKMHSKNYYYYYYEDGNKRRSHKGAKSKG

Sequences:

>Translated_472_residues
MTIADLLQIVRKHLASAIISFVVVFAAVAAVTFIMPPKYTATAEVFATYAGQSGETQTTNDMSSGANYLNTQITTYPELV
KTEAVLQPVIKDLGLDMTTTDLADVVTATNPTNTFMVDISAEVGDPQQAADIANSVAKNLADQVSSDLYNNSSSSDSPIK
LTVVQKAQTPTGQSSPNIPLYLAAGLILGLIVGIGVALLKDILNTKVDSTDDVRELTHASSLGAVPQAAILDDSRPVVVA
QPAGSEAEEFRRIRTNLSFLTTTATQGHGRLLVITSTDPSEGKTTVSCNVAVALAEEGKSVLLIDADLRHPSVAHKLGIE
GHVGLSHVLSRQASPADVIQKYWKPNLHIMPAGKRPANASILLNSDLMKEMVEQALTQYDYVIIDTAPLSVASDATVFGR
MAGGLVLVTGKGVVEKKELRSTATALQTAEVPILGFIFNFADPKKMHSKNYYYYYYEDGNKRRSHKGAKSKG
>Mature_471_residues
TIADLLQIVRKHLASAIISFVVVFAAVAAVTFIMPPKYTATAEVFATYAGQSGETQTTNDMSSGANYLNTQITTYPELVK
TEAVLQPVIKDLGLDMTTTDLADVVTATNPTNTFMVDISAEVGDPQQAADIANSVAKNLADQVSSDLYNNSSSSDSPIKL
TVVQKAQTPTGQSSPNIPLYLAAGLILGLIVGIGVALLKDILNTKVDSTDDVRELTHASSLGAVPQAAILDDSRPVVVAQ
PAGSEAEEFRRIRTNLSFLTTTATQGHGRLLVITSTDPSEGKTTVSCNVAVALAEEGKSVLLIDADLRHPSVAHKLGIEG
HVGLSHVLSRQASPADVIQKYWKPNLHIMPAGKRPANASILLNSDLMKEMVEQALTQYDYVIIDTAPLSVASDATVFGRM
AGGLVLVTGKGVVEKKELRSTATALQTAEVPILGFIFNFADPKKMHSKNYYYYYYEDGNKRRSHKGAKSKG

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=285, Percent_Identity=31.9298245614035, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI87082032, Length=309, Percent_Identity=29.126213592233, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 50377; Mature: 50246

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIADLLQIVRKHLASAIISFVVVFAAVAAVTFIMPPKYTATAEVFATYAGQSGETQTTN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
DMSSGANYLNTQITTYPELVKTEAVLQPVIKDLGLDMTTTDLADVVTATNPTNTFMVDIS
CHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEE
AEVGDPQQAADIANSVAKNLADQVSSDLYNNSSSSDSPIKLTVVQKAQTPTGQSSPNIPL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCH
YLAAGLILGLIVGIGVALLKDILNTKVDSTDDVRELTHASSLGAVPQAAILDDSRPVVVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHEECCCCCEEEE
QPAGSEAEEFRRIRTNLSFLTTTATQGHGRLLVITSTDPSEGKTTVSCNVAVALAEEGKS
CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEEEECCCCE
VLLIDADLRHPSVAHKLGIEGHVGLSHVLSRQASPADVIQKYWKPNLHIMPAGKRPANAS
EEEEECCCCCCCHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCE
ILLNSDLMKEMVEQALTQYDYVIIDTAPLSVASDATVFGRMAGGLVLVTGKGVVEKKELR
EEECHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHH
STATALQTAEVPILGFIFNFADPKKMHSKNYYYYYYEDGNKRRSHKGAKSKG
HHHHHHHHCCCCHHHHHHCCCCCHHHHCCCEEEEEEECCCCHHHCCCCCCCC
>Mature Secondary Structure 
TIADLLQIVRKHLASAIISFVVVFAAVAAVTFIMPPKYTATAEVFATYAGQSGETQTTN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
DMSSGANYLNTQITTYPELVKTEAVLQPVIKDLGLDMTTTDLADVVTATNPTNTFMVDIS
CHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEE
AEVGDPQQAADIANSVAKNLADQVSSDLYNNSSSSDSPIKLTVVQKAQTPTGQSSPNIPL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCH
YLAAGLILGLIVGIGVALLKDILNTKVDSTDDVRELTHASSLGAVPQAAILDDSRPVVVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHEECCCCCEEEE
QPAGSEAEEFRRIRTNLSFLTTTATQGHGRLLVITSTDPSEGKTTVSCNVAVALAEEGKS
CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEEEECCCCE
VLLIDADLRHPSVAHKLGIEGHVGLSHVLSRQASPADVIQKYWKPNLHIMPAGKRPANAS
EEEEECCCCCCCHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCE
ILLNSDLMKEMVEQALTQYDYVIIDTAPLSVASDATVFGRMAGGLVLVTGKGVVEKKELR
EEECHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHH
STATALQTAEVPILGFIFNFADPKKMHSKNYYYYYYEDGNKRRSHKGAKSKG
HHHHHHHHCCCCHHHHHHCCCCCHHHHCCCEEEEEEECCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]