| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692937
Identifier: 213692937
GI number: 213692937
Start: 2297766
End: 2299148
Strand: Reverse
Name: 213692937
Synonym: Blon_2081
Alternate gene names: NA
Gene position: 2299148-2297766 (Counterclockwise)
Preceding gene: 213692938
Following gene: 213692932
Centisome position: 81.16
GC content: 57.56
Gene sequence:
>1383_bases ATGGGAACAGACGAACGCCCTGAACCGAACGCGGAATCTGGTTCCTCTACGTCGCCGGCTCGTGGTGATATCGTCGATAC CTGCTGGGACATACCGCCTATCTCGTTTGTCGAGAACGCAGGCAGCGCTGCGTCGGGTGACGGCAACAGTACTGGTGCTG TTGCGGATGGCTCTCAATTTGCATTCCCCAGCTTTGACGAAGTAATGGAGTGGCCCGCTGCGGGCGCGGCGAATACTGAT GGCGGTGCCTCTTCCCCTTCCGATGCTGTGGCTACTGCCCCGATGACTTTTGCGGCGCCTGATACTGCGGAGAGCGCTCA GTCGCCTCGGCGGGATGACAATGCGACGCTGCCGCTTTTTGCGCCGGTTCCTGAAGCCAAGCCGCAACGTGATAGTGCTA TAGACGATTTGAACATCGACTTCAGTGCCATCGAACAGAATCCCGAGCCGGTGGAGGAGCCGGAAGAAGACCGTGTGGCA GGGACTCCTCGCGGTGGCAAGGGCGGCAAGAAGAAGACCAAGGGCATTATCATTTCGGTGATTGCTGCGCTGGTGGTGAT TGCAGCGATCATTGGTGGTGTATGGTACTGGCGTTCCAGCGAGCAGCGTCAGGAAAGCCATCAGCTGCATCAGGATGCGT TGACGGCATGTGCTGAGGCCGTGGACCAGAATTCCACCGCTCAGAAGGCGCTGGCCAAGGCGTTGGCCGACGCCAAGAGT GCTCAAAGCATTACAGCTGATCAAGTGGCTGACGGCGCGACCGTGGATGCGTTGAAGAAGGCAGTTGCTGCGGTAAAGAA CGTGGAAGCGGTGGAGTGCAAGACTTCAGCTTCTACGTCGGACCTCAAGGAATATGCCAAGACGGCCACTAGCCAGACCA AGACCGCCAAGAAGAACGCCACTGTGATTACTGCCGCGGCAAAGGCCGTGACGGACAGCAAGAACACTAAGGATCAGGCT AACGCCCAGCAGGCGTTGCAAGGCAAGATCGCCGAGGCACAGACTTTGCTGGACAACAGCCTGTATGCCGTCGACGATAA TTCAACGCGAGTGACGCTGGAAAGCGACATCGCCAACGCCAATACCGTGCTGTCCCAGCAGGGCACTGACGTAAAGGCCA TGCAGGATGCCGTCAACACGTTGACTGCGTCCATGGATGCAGTCAACACGTCCATGGCCAACTACAGCGCAGCTGTTGAG GCTCAGCAAGAAGCAGCGCGGCAGAAAGCTCTGAATGATTATTATGCACGATTAAGGCAGCAGCAGTTGTTGCAGCAGCA GAACAACCAGACGATGAGGGGGACAGGCGCCCCGGCGCCTGATCAGGAGAAGAAACCGAAAGATGATCAGGAGAAGGAAC CGGAAGTTGAGCCGAAGCCGTAA
Upstream 100 bases:
>100_bases GAATTGTGACGTTCTTGAGTACCAGCTGGCACACTTGGCATGGGGCTGTATAAACTGACAGTTTGGAATGACTTCAATGA TGCAAAGGAATGAGAAGAGC
Downstream 100 bases:
>100_bases GTGATTGTGCTCTAGCCTAATTGTCAAAGGAACCGCGAATAACAGTAGCGCGCATTTCCACCATTTGCTGTTGCGAACCA GCTCAATATACGCGTGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MGTDERPEPNAESGSSTSPARGDIVDTCWDIPPISFVENAGSAASGDGNSTGAVADGSQFAFPSFDEVMEWPAAGAANTD GGASSPSDAVATAPMTFAAPDTAESAQSPRRDDNATLPLFAPVPEAKPQRDSAIDDLNIDFSAIEQNPEPVEEPEEDRVA GTPRGGKGGKKKTKGIIISVIAALVVIAAIIGGVWYWRSSEQRQESHQLHQDALTACAEAVDQNSTAQKALAKALADAKS AQSITADQVADGATVDALKKAVAAVKNVEAVECKTSASTSDLKEYAKTATSQTKTAKKNATVITAAAKAVTDSKNTKDQA NAQQALQGKIAEAQTLLDNSLYAVDDNSTRVTLESDIANANTVLSQQGTDVKAMQDAVNTLTASMDAVNTSMANYSAAVE AQQEAARQKALNDYYARLRQQQLLQQQNNQTMRGTGAPAPDQEKKPKDDQEKEPEVEPKP
Sequences:
>Translated_460_residues MGTDERPEPNAESGSSTSPARGDIVDTCWDIPPISFVENAGSAASGDGNSTGAVADGSQFAFPSFDEVMEWPAAGAANTD GGASSPSDAVATAPMTFAAPDTAESAQSPRRDDNATLPLFAPVPEAKPQRDSAIDDLNIDFSAIEQNPEPVEEPEEDRVA GTPRGGKGGKKKTKGIIISVIAALVVIAAIIGGVWYWRSSEQRQESHQLHQDALTACAEAVDQNSTAQKALAKALADAKS AQSITADQVADGATVDALKKAVAAVKNVEAVECKTSASTSDLKEYAKTATSQTKTAKKNATVITAAAKAVTDSKNTKDQA NAQQALQGKIAEAQTLLDNSLYAVDDNSTRVTLESDIANANTVLSQQGTDVKAMQDAVNTLTASMDAVNTSMANYSAAVE AQQEAARQKALNDYYARLRQQQLLQQQNNQTMRGTGAPAPDQEKKPKDDQEKEPEVEPKP >Mature_459_residues GTDERPEPNAESGSSTSPARGDIVDTCWDIPPISFVENAGSAASGDGNSTGAVADGSQFAFPSFDEVMEWPAAGAANTDG GASSPSDAVATAPMTFAAPDTAESAQSPRRDDNATLPLFAPVPEAKPQRDSAIDDLNIDFSAIEQNPEPVEEPEEDRVAG TPRGGKGGKKKTKGIIISVIAALVVIAAIIGGVWYWRSSEQRQESHQLHQDALTACAEAVDQNSTAQKALAKALADAKSA QSITADQVADGATVDALKKAVAAVKNVEAVECKTSASTSDLKEYAKTATSQTKTAKKNATVITAAAKAVTDSKNTKDQAN AQQALQGKIAEAQTLLDNSLYAVDDNSTRVTLESDIANANTVLSQQGTDVKAMQDAVNTLTASMDAVNTSMANYSAAVEA QQEAARQKALNDYYARLRQQQLLQQQNNQTMRGTGAPAPDQEKKPKDDQEKEPEVEPKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48251; Mature: 48120
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDERPEPNAESGSSTSPARGDIVDTCWDIPPISFVENAGSAASGDGNSTGAVADGSQF CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC AFPSFDEVMEWPAAGAANTDGGASSPSDAVATAPMTFAAPDTAESAQSPRRDDNATLPLF CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCHHHHCCCCCCCCCCCEEE APVPEAKPQRDSAIDDLNIDFSAIEQNPEPVEEPEEDRVAGTPRGGKGGKKKTKGIIISV ECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IAALVVIAAIIGGVWYWRSSEQRQESHQLHQDALTACAEAVDQNSTAQKALAKALADAKS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AQSITADQVADGATVDALKKAVAAVKNVEAVECKTSASTSDLKEYAKTATSQTKTAKKNA HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC TVITAAAKAVTDSKNTKDQANAQQALQGKIAEAQTLLDNSLYAVDDNSTRVTLESDIANA EEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCH NTVLSQQGTDVKAMQDAVNTLTASMDAVNTSMANYSAAVEAQQEAARQKALNDYYARLRQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQLLQQQNNQTMRGTGAPAPDQEKKPKDDQEKEPEVEPKP HHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTDERPEPNAESGSSTSPARGDIVDTCWDIPPISFVENAGSAASGDGNSTGAVADGSQF CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC AFPSFDEVMEWPAAGAANTDGGASSPSDAVATAPMTFAAPDTAESAQSPRRDDNATLPLF CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCHHHHCCCCCCCCCCCEEE APVPEAKPQRDSAIDDLNIDFSAIEQNPEPVEEPEEDRVAGTPRGGKGGKKKTKGIIISV ECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IAALVVIAAIIGGVWYWRSSEQRQESHQLHQDALTACAEAVDQNSTAQKALAKALADAKS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AQSITADQVADGATVDALKKAVAAVKNVEAVECKTSASTSDLKEYAKTATSQTKTAKKNA HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC TVITAAAKAVTDSKNTKDQANAQQALQGKIAEAQTLLDNSLYAVDDNSTRVTLESDIANA EEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCH NTVLSQQGTDVKAMQDAVNTLTASMDAVNTSMANYSAAVEAQQEAARQKALNDYYARLRQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQLLQQQNNQTMRGTGAPAPDQEKKPKDDQEKEPEVEPKP HHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA