| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is gsiB [H]
Identifier: 213692871
GI number: 213692871
Start: 2195896
End: 2197560
Strand: Reverse
Name: gsiB [H]
Synonym: Blon_2012
Alternate gene names: 213692871
Gene position: 2197560-2195896 (Counterclockwise)
Preceding gene: 213692874
Following gene: 213692870
Centisome position: 77.58
GC content: 62.76
Gene sequence:
>1665_bases ATGTCCCAGAACAATGGTGTGCACGGCGAGTCCGGCGCAACCGAAGACAGGAACATCGACGGCGCGAATCAAGCCGCCAG CACCGACGCGAGCCTGAACGCGCGCGCGAAATCATCAAACAAGAAGAACGGCGGCCCGAAATGGTGGCTGTGGACGCTGA TCGCGGTCGTCGTGGCCGCGGCGCTCATCGTGGGCGTCACCGTCTTCGGCGGGAAAGGCAAGGGCAAGGACGCGAACGCC TCCGGCTCGGCCAGCCGATCCGACACCGTGGCCGTCGGCCTCAAACTCGCCCCGGTCAATCTTGACATCCGCCACCAGTC GGGTTCGGCCCTTGAGCAGATCCTCATCGGCAACGTGTACGAGGGTCTCGTCTCGCGTGGCTCGGACAACAAGGTCCACC CCGGTCTGGCCAAGAGCTGGGAGATCTCCAAGGATGGCCTGACCTACACATTCCACCTCAACGAGAAGATGAACTTCTCC AACGGCGACAAGCTCGACGCCGAGGATGTGGCGTGGTCCATCAACGAGCTCAAGGCCCAGAAGTACTACGACTACGAGCA GGTCAAGAGCCTGGACAAGGCCGAGGCCGTGGACGCCAACACGGTCAGGCTCACCCTCTCCGCGCCCAACTCGAACATGC TGTGGTACCTCACCAGCCGTCCCGGCCTGGTCTACGACAAGGACGCCACCTGGGATCAGAAGAACGGCGCGTTGGGCTCG GGCCCGTACACCGTGGTCTCCTTTGACCCGAACGACAAGATCGTGCTCAAGGCGAACCCCAAGTATTGGGGCACCGAGCA CAAGGCGAGGACCGAGAACGTGATCGTCCGGTTCCTGCCGGACGAGAACGCCAGCATCAACGCCCTCAAGAGCGGCGACG TGCAGGTGCTTTCGCCCATCTCCGCCACCCTTGCCGATCCGTTCCGCAAGGATCCGAACTATGTGGTCAAGTCCGGTGAC GGTTCCGACAAGTTCGTGCTCGCCTTCAACATGGCCAACGACAAGCTCTCCGACAAGCGCGTCCGTCAGGCCATCCGATA CGCCATCGACCATAAGCAGATCATCGCCTCGCGCGGCGGCGTGGACGCCCCCCTCGGCGGTCCGATCCCCAAGGTCGATC CCGGTTACGAGGATCTGAGCGGCCTGTACCCGCATGACGTGGCCAAGGCCAAGAAGCTCATGGAGCAGGCCGGATACTCC GAGTCGAAGCCGCTGGACCTGACCCTCACCTACGCCAACGTGTACGGCACCGAACTCGGCGACCAGCTCAAGAGCCAGCT CAAGCCCATCGGCATCGACCTGAAGATCAACTACGTGGAGTTCTCCACTTGGCTGCAGGACGTGCACGCCAACGGCAACT ACGATCTTTCGCTCGTGGACCATGCCGAAAGCCACGACTTCTACGGATGGACCACGCCGAGCTACTACTTCCACTACGAC AACAAGGACGTGCAGGCCCTGTACGCCAAGGCGCTGGAGGCCACCTCCGACGACGAGGCCTCGAAGTATCTGGCCAAGGC CGCGAAGATCGTCTCCGAGGACGCGCCGGCCGACTGGCTGTTCAGCTGGAAGGTCACCATCGCCTACGCCAAGGGCGTGG ACGGCTTCCCGCAGAACCTGAGCCAGACCGTGCTGCCCCTCTGGCGGATCACCTACACCAAGTAG
Upstream 100 bases:
>100_bases GTAGAACGTGGTGATCGACCCGAATGGGCGGTCAACCACGCAAGATAACAACGAAACCATATTCGGGCGTAAGCATGCCC GAATGCATCAGGGAGTATCC
Downstream 100 bases:
>100_bases TCCCGGAACCCATCGGTCGGGCGCGGCGCGGGAGTGATTCCGTGGCGCGCCCGACCGTGGACGGCCCATCCGGCCGGTGA CGCCACGGGCGGTGGCGAGG
Product: extracellular solute-binding protein, family 5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSQNNGVHGESGATEDRNIDGANQAASTDASLNARAKSSNKKNGGPKWWLWTLIAVVVAAALIVGVTVFGGKGKGKDANA SGSASRSDTVAVGLKLAPVNLDIRHQSGSALEQILIGNVYEGLVSRGSDNKVHPGLAKSWEISKDGLTYTFHLNEKMNFS NGDKLDAEDVAWSINELKAQKYYDYEQVKSLDKAEAVDANTVRLTLSAPNSNMLWYLTSRPGLVYDKDATWDQKNGALGS GPYTVVSFDPNDKIVLKANPKYWGTEHKARTENVIVRFLPDENASINALKSGDVQVLSPISATLADPFRKDPNYVVKSGD GSDKFVLAFNMANDKLSDKRVRQAIRYAIDHKQIIASRGGVDAPLGGPIPKVDPGYEDLSGLYPHDVAKAKKLMEQAGYS ESKPLDLTLTYANVYGTELGDQLKSQLKPIGIDLKINYVEFSTWLQDVHANGNYDLSLVDHAESHDFYGWTTPSYYFHYD NKDVQALYAKALEATSDDEASKYLAKAAKIVSEDAPADWLFSWKVTIAYAKGVDGFPQNLSQTVLPLWRITYTK
Sequences:
>Translated_554_residues MSQNNGVHGESGATEDRNIDGANQAASTDASLNARAKSSNKKNGGPKWWLWTLIAVVVAAALIVGVTVFGGKGKGKDANA SGSASRSDTVAVGLKLAPVNLDIRHQSGSALEQILIGNVYEGLVSRGSDNKVHPGLAKSWEISKDGLTYTFHLNEKMNFS NGDKLDAEDVAWSINELKAQKYYDYEQVKSLDKAEAVDANTVRLTLSAPNSNMLWYLTSRPGLVYDKDATWDQKNGALGS GPYTVVSFDPNDKIVLKANPKYWGTEHKARTENVIVRFLPDENASINALKSGDVQVLSPISATLADPFRKDPNYVVKSGD GSDKFVLAFNMANDKLSDKRVRQAIRYAIDHKQIIASRGGVDAPLGGPIPKVDPGYEDLSGLYPHDVAKAKKLMEQAGYS ESKPLDLTLTYANVYGTELGDQLKSQLKPIGIDLKINYVEFSTWLQDVHANGNYDLSLVDHAESHDFYGWTTPSYYFHYD NKDVQALYAKALEATSDDEASKYLAKAAKIVSEDAPADWLFSWKVTIAYAKGVDGFPQNLSQTVLPLWRITYTK >Mature_553_residues SQNNGVHGESGATEDRNIDGANQAASTDASLNARAKSSNKKNGGPKWWLWTLIAVVVAAALIVGVTVFGGKGKGKDANAS GSASRSDTVAVGLKLAPVNLDIRHQSGSALEQILIGNVYEGLVSRGSDNKVHPGLAKSWEISKDGLTYTFHLNEKMNFSN GDKLDAEDVAWSINELKAQKYYDYEQVKSLDKAEAVDANTVRLTLSAPNSNMLWYLTSRPGLVYDKDATWDQKNGALGSG PYTVVSFDPNDKIVLKANPKYWGTEHKARTENVIVRFLPDENASINALKSGDVQVLSPISATLADPFRKDPNYVVKSGDG SDKFVLAFNMANDKLSDKRVRQAIRYAIDHKQIIASRGGVDAPLGGPIPKVDPGYEDLSGLYPHDVAKAKKLMEQAGYSE SKPLDLTLTYANVYGTELGDQLKSQLKPIGIDLKINYVEFSTWLQDVHANGNYDLSLVDHAESHDFYGWTTPSYYFHYDN KDVQALYAKALEATSDDEASKYLAKAAKIVSEDAPADWLFSWKVTIAYAKGVDGFPQNLSQTVLPLWRITYTK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=477, Percent_Identity=23.2704402515723, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789966, Length=503, Percent_Identity=25.4473161033797, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1787762, Length=447, Percent_Identity=26.3982102908277, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI87081878, Length=491, Percent_Identity=24.2362525458248, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1789887, Length=351, Percent_Identity=26.2108262108262, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1787495, Length=521, Percent_Identity=23.9923224568138, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1789397, Length=489, Percent_Identity=24.1308793456033, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787551, Length=302, Percent_Identity=24.1721854304636, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 60630; Mature: 60499
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNNGVHGESGATEDRNIDGANQAASTDASLNARAKSSNKKNGGPKWWLWTLIAVVVAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ALIVGVTVFGGKGKGKDANASGSASRSDTVAVGLKLAPVNLDIRHQSGSALEQILIGNVY HHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHH EGLVSRGSDNKVHPGLAKSWEISKDGLTYTFHLNEKMNFSNGDKLDAEDVAWSINELKAQ HHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KYYDYEQVKSLDKAEAVDANTVRLTLSAPNSNMLWYLTSRPGLVYDKDATWDQKNGALGS HCCCHHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCCCC GPYTVVSFDPNDKIVLKANPKYWGTEHKARTENVIVRFLPDENASINALKSGDVQVLSPI CCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEECCH SATLADPFRKDPNYVVKSGDGSDKFVLAFNMANDKLSDKRVRQAIRYAIDHKQIIASRGG HHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VDAPLGGPIPKVDPGYEDLSGLYPHDVAKAKKLMEQAGYSESKPLDLTLTYANVYGTELG CCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHH DQLKSQLKPIGIDLKINYVEFSTWLQDVHANGNYDLSLVDHAESHDFYGWTTPSYYFHYD HHHHHHCCCEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEC NKDVQALYAKALEATSDDEASKYLAKAAKIVSEDAPADWLFSWKVTIAYAKGVDGFPQNL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCHHH SQTVLPLWRITYTK HHHHHHHEEEEECC >Mature Secondary Structure SQNNGVHGESGATEDRNIDGANQAASTDASLNARAKSSNKKNGGPKWWLWTLIAVVVAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ALIVGVTVFGGKGKGKDANASGSASRSDTVAVGLKLAPVNLDIRHQSGSALEQILIGNVY HHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHH EGLVSRGSDNKVHPGLAKSWEISKDGLTYTFHLNEKMNFSNGDKLDAEDVAWSINELKAQ HHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KYYDYEQVKSLDKAEAVDANTVRLTLSAPNSNMLWYLTSRPGLVYDKDATWDQKNGALGS HCCCHHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCCCC GPYTVVSFDPNDKIVLKANPKYWGTEHKARTENVIVRFLPDENASINALKSGDVQVLSPI CCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEECCH SATLADPFRKDPNYVVKSGDGSDKFVLAFNMANDKLSDKRVRQAIRYAIDHKQIIASRGG HHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VDAPLGGPIPKVDPGYEDLSGLYPHDVAKAKKLMEQAGYSESKPLDLTLTYANVYGTELG CCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHH DQLKSQLKPIGIDLKINYVEFSTWLQDVHANGNYDLSLVDHAESHDFYGWTTPSYYFHYD HHHHHHCCCEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEC NKDVQALYAKALEATSDDEASKYLAKAAKIVSEDAPADWLFSWKVTIAYAKGVDGFPQNL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCHHH SQTVLPLWRITYTK HHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA