| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692844
Identifier: 213692844
GI number: 213692844
Start: 2163556
End: 2164722
Strand: Reverse
Name: 213692844
Synonym: Blon_1985
Alternate gene names: NA
Gene position: 2164722-2163556 (Counterclockwise)
Preceding gene: 213692845
Following gene: 213692843
Centisome position: 76.42
GC content: 67.01
Gene sequence:
>1167_bases ATGAAGCATCTCACCCGCCGCACCATCGCCATCATCGTGGCGTTGCTGTCCTCACTCGCGCTGACGCTCACCGTCGTCTC CCTGCCGCGCCAGGCGTATGCGGTCGATGGCGCGGACGCGGGAGGCGCCGCGCAGGGAAGCGACGGCGGCGCCACGCCGC TCGCCGGACCGGTGCCCAACATCATCATCACCAACTTCGCGTATGGCGGTGATTCCGTGGCCGCCGGATCCAAATTCAAC CTCGACTTCACCTTCCAGAACAAGGGACAGGTGGCGGTGACGAACATGGTCGTCACCGTGGACGGCGCGGAGGGATTCGC CATCGCGGGCGGCACGAACACGTTCTACGTCGACGCGCTGTGGGCCGGGTACGCGATGACGCAGACCGTGCCCATGCAGG CGCTCGCCTCCGCGAAAAGCGGCGCGCAGCCCGTGACCGTGAACTTCCGATACGAGTATGTGGACGCCGGCGCCCGCTCC TCAAGCCAGTCCGACGTCAAGATTTCCGTGCCGATCAGTCAGCCTGACCGGTTCGAAATCAGTGATCCCGTAGTGCCCGA CCAGGTGATCGCCGGCCAGGAAAACACGGTCACGATGGAATATGTGAACAAGGGCAAAGGCGATATCGCCAACGTCGAGG CCACGATGGAGGGCGAAGGTTTCGATGCCACGATGAAAACCCAGTACGTGGGCAATGTGGCTTCCGGCGCCACCGGCACG ATCGGGTACGCCTTCACGCCGCACGCGTCAGGCGAGCTGAAGACCACGCTCAAAGTCACGTACGAGGATTCCGACGGACA GACCAAAACCAAGGAATTCCCGCTCACCGTGTCCGTGGCCGACGCGCCAGCGGCGGACCAGCCCGGCGCGTCCGATTCGG TCGAAGGCCGCGGCGGCGATCGGGGGCTGCCGGTGCCGGCGTATGTGGCCATCGCCGTGGGCGTTGTGACGGTGATCACG GCGATCGTGCTGCTCGTGCGTCGCCGCAGGAGGAAGGCCGGGAAGAACGACATCGATGAGGATTGGGATGATTGGTCCGC GGGCGGGGAAGGCGCGGCCCCGGGCGATGGAGCCGCCGATCAGGCGTCCCCGCGCACCTCGGCGCCCGACGGGACGGCGC CCGGCGGGACGGCACCCGCGCCCGCCGCCCCCTCCCGCAAGGGTTGA
Upstream 100 bases:
>100_bases GTCGCATCACCGGCGATCGGCTCCTCGGTGCCGGATCCCCTACTCCCCGCCCATCCGCATCATCCACACCATCCAGCCAA GGCATGCAAGGAGCAGACCG
Downstream 100 bases:
>100_bases AAGGTTCGGCCATGCGATTCGGCGACATCCTGCGACTTTGCCGGCAGAACCTATGGCGGCGCAAATCCCGTACGATCCTG ACCGTGCTGGGCGTCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: S-Layer Domain-Like Protein; S-Layer Protein; S-Layer Domain Protein
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKHLTRRTIAIIVALLSSLALTLTVVSLPRQAYAVDGADAGGAAQGSDGGATPLAGPVPNIIITNFAYGGDSVAAGSKFN LDFTFQNKGQVAVTNMVVTVDGAEGFAIAGGTNTFYVDALWAGYAMTQTVPMQALASAKSGAQPVTVNFRYEYVDAGARS SSQSDVKISVPISQPDRFEISDPVVPDQVIAGQENTVTMEYVNKGKGDIANVEATMEGEGFDATMKTQYVGNVASGATGT IGYAFTPHASGELKTTLKVTYEDSDGQTKTKEFPLTVSVADAPAADQPGASDSVEGRGGDRGLPVPAYVAIAVGVVTVIT AIVLLVRRRRRKAGKNDIDEDWDDWSAGGEGAAPGDGAADQASPRTSAPDGTAPGGTAPAPAAPSRKG
Sequences:
>Translated_388_residues MKHLTRRTIAIIVALLSSLALTLTVVSLPRQAYAVDGADAGGAAQGSDGGATPLAGPVPNIIITNFAYGGDSVAAGSKFN LDFTFQNKGQVAVTNMVVTVDGAEGFAIAGGTNTFYVDALWAGYAMTQTVPMQALASAKSGAQPVTVNFRYEYVDAGARS SSQSDVKISVPISQPDRFEISDPVVPDQVIAGQENTVTMEYVNKGKGDIANVEATMEGEGFDATMKTQYVGNVASGATGT IGYAFTPHASGELKTTLKVTYEDSDGQTKTKEFPLTVSVADAPAADQPGASDSVEGRGGDRGLPVPAYVAIAVGVVTVIT AIVLLVRRRRRKAGKNDIDEDWDDWSAGGEGAAPGDGAADQASPRTSAPDGTAPGGTAPAPAAPSRKG >Mature_388_residues MKHLTRRTIAIIVALLSSLALTLTVVSLPRQAYAVDGADAGGAAQGSDGGATPLAGPVPNIIITNFAYGGDSVAAGSKFN LDFTFQNKGQVAVTNMVVTVDGAEGFAIAGGTNTFYVDALWAGYAMTQTVPMQALASAKSGAQPVTVNFRYEYVDAGARS SSQSDVKISVPISQPDRFEISDPVVPDQVIAGQENTVTMEYVNKGKGDIANVEATMEGEGFDATMKTQYVGNVASGATGT IGYAFTPHASGELKTTLKVTYEDSDGQTKTKEFPLTVSVADAPAADQPGASDSVEGRGGDRGLPVPAYVAIAVGVVTVIT AIVLLVRRRRRKAGKNDIDEDWDDWSAGGEGAAPGDGAADQASPRTSAPDGTAPGGTAPAPAAPSRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39751; Mature: 39751
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLTRRTIAIIVALLSSLALTLTVVSLPRQAYAVDGADAGGAAQGSDGGATPLAGPVPN CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCC IIITNFAYGGDSVAAGSKFNLDFTFQNKGQVAVTNMVVTVDGAEGFAIAGGTNTFYVDAL EEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEEH WAGYAMTQTVPMQALASAKSGAQPVTVNFRYEYVDAGARSSSQSDVKISVPISQPDRFEI HHCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEC SDPVVPDQVIAGQENTVTMEYVNKGKGDIANVEATMEGEGFDATMKTQYVGNVASGATGT CCCCCCCHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEHHCCCCCCCCCCCC IGYAFTPHASGELKTTLKVTYEDSDGQTKTKEFPLTVSVADAPAADQPGASDSVEGRGGD EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC RGLPVPAYVAIAVGVVTVITAIVLLVRRRRRKAGKNDIDEDWDDWSAGGEGAAPGDGAAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC QASPRTSAPDGTAPGGTAPAPAAPSRKG CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHLTRRTIAIIVALLSSLALTLTVVSLPRQAYAVDGADAGGAAQGSDGGATPLAGPVPN CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCC IIITNFAYGGDSVAAGSKFNLDFTFQNKGQVAVTNMVVTVDGAEGFAIAGGTNTFYVDAL EEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEEH WAGYAMTQTVPMQALASAKSGAQPVTVNFRYEYVDAGARSSSQSDVKISVPISQPDRFEI HHCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEC SDPVVPDQVIAGQENTVTMEYVNKGKGDIANVEATMEGEGFDATMKTQYVGNVASGATGT CCCCCCCHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEHHCCCCCCCCCCCC IGYAFTPHASGELKTTLKVTYEDSDGQTKTKEFPLTVSVADAPAADQPGASDSVEGRGGD EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC RGLPVPAYVAIAVGVVTVITAIVLLVRRRRRKAGKNDIDEDWDDWSAGGEGAAPGDGAAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC QASPRTSAPDGTAPGGTAPAPAAPSRKG CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA