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The map label for this gene is ytrF [H]

Identifier: 213692843

GI number: 213692843

Start: 2162021

End: 2163544

Strand: Reverse

Name: ytrF [H]

Synonym: Blon_1984

Alternate gene names: 213692843

Gene position: 2163544-2162021 (Counterclockwise)

Preceding gene: 213692844

Following gene: 213692841

Centisome position: 76.38

GC content: 64.5

Gene sequence:

>1524_bases
ATGCGATTCGGCGACATCCTGCGACTTTGCCGGCAGAACCTATGGCGGCGCAAATCCCGTACGATCCTGACCGTGCTGGG
CGTCATCGTCGGCTGCTGCTCGATCGTGCTCATGGTCTCGCTGGGCCAGGGCATCAACGAGCAGATGAACGCCTTGATCA
AATCCATGGGCGATCTGTCCATCGTCACCGTGTATGCCGACGGCGGCCCCGACCGGGCGGAGCGGGGCGGTTCGTCGACC
GGGAGCGGCGCCAAGCTCGACGACAAGGCTCTGGAGTCCTTCCGTGCGATGAACGGCGTGGACGGCGTGACGCCGATGAT
GGACTTCCCCTACACCGTGACGGCCAGAGCCGGCGCCGGCGGGCGTTACCTCCATGATTACGTGCAGGTCATGGGCGTCG
ATATGACGCAGTTCGACCGTATGGGCTACAAGCTCGTCGGCGGCGAGAAACCGTTCCGCGACGATCAGGTGCTCGCCGGG
GAGACGTTCGCCTACGGGTTCCTGGACACGCTGAGGAACGGCGAGCGGCGCATGGGCGCGGGTGACGGCATGACGCCCCC
GTGCGTCTCCGGCGCCGACGCCCAATGCGAGGGCCGCCGTGACGAGAAGCCGTTCTTCGACCCGCTCGTCACGCGGATTC
GCGTGACCACCGGCGTCAATTACCAGGGCGACCAGTACACCATGTCCATGCAGGGCGGCGGTTCGGCCGGTGCGGCGGGC
GCGGGCGGCGCCGCGGGACGCTCGGAAAACATCACCCTTGACCTGCAGATCAGCGGCGTCACGGCGAGCGACTACGGCAA
AGGCTTTGCCACCTCCGATGGGCTGATCATGGATGTGAAGGCGATGAAGGCGCTGGCCGCAAAGGTCAATCCGTCCGCCA
GGAAATCCGACACCTACAGTCAGGTGCTGGTCAAGGCCGCCGACCTCGGATCCGTGCCCGAAGTCGAATCGCAGATCAAG
GCGTTGGGATACGAGACCTCCTCCTATGAGGACATGCGCAGGTCGATGGATGAGCAATCACGGGCGGTCCAGCTGATTCT
GGGCGGCATCGGCGCGGTCGCGCTGCTGGTGGCGGCCATCGGCATCGCCAATACGATGATCATGTCCGTCACGGAGCGCA
CGCGGGAGATCGGCATCATGAAGGCGCTCGGCTGCTATGTGCGGGACATCCGCATCATGTTTCTCGCGGAGGCCGGCGCG
ATCGGATTCTTCGGCGGACTGATCGGCTGCGCATTGAGCGGACTGGTCTCGCTGGGCATCAACGTCGCCGGAATGCTGTA
CGCGAGTGGTGCTCCCGGTGCGCCGGGCGGCGGCGATGGCGCGCAGTCCGGCGCCTCCCTCTGGACCATACTGCGGCAGG
CGATAGTTGGTGGCGAGAATGTGACCCGTTATTCGGTGATTCCGTGGTGGCTGTTCCTGTTCGCCGTACTGTTTTCCACG
CTGATCGGCTTGCTGTTCGGCTTCGGCCCGGCCAATAAAGCCGTTAAAATCCCGGCCCTAGACGCCATCAAAAACAACGA
GTGA

Upstream 100 bases:

>100_bases
ATCAGGCGTCCCCGCGCACCTCGGCGCCCGACGGGACGGCGCCCGGCGGGACGGCACCCGCGCCCGCCGCCCCCTCCCGC
AAGGGTTGAAAGGTTCGGCC

Downstream 100 bases:

>100_bases
CCGATTCGACCACCTGATGTACCGTCAGGCCATACCGCTCGTCCAAGACGTCCAGCGGCACGCGGTCGGTGAATTCCTTG
TCCGCGCCGAAGTTCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRFGDILRLCRQNLWRRKSRTILTVLGVIVGCCSIVLMVSLGQGINEQMNALIKSMGDLSIVTVYADGGPDRAERGGSST
GSGAKLDDKALESFRAMNGVDGVTPMMDFPYTVTARAGAGGRYLHDYVQVMGVDMTQFDRMGYKLVGGEKPFRDDQVLAG
ETFAYGFLDTLRNGERRMGAGDGMTPPCVSGADAQCEGRRDEKPFFDPLVTRIRVTTGVNYQGDQYTMSMQGGGSAGAAG
AGGAAGRSENITLDLQISGVTASDYGKGFATSDGLIMDVKAMKALAAKVNPSARKSDTYSQVLVKAADLGSVPEVESQIK
ALGYETSSYEDMRRSMDEQSRAVQLILGGIGAVALLVAAIGIANTMIMSVTERTREIGIMKALGCYVRDIRIMFLAEAGA
IGFFGGLIGCALSGLVSLGINVAGMLYASGAPGAPGGGDGAQSGASLWTILRQAIVGGENVTRYSVIPWWLFLFAVLFST
LIGLLFGFGPANKAVKIPALDAIKNNE

Sequences:

>Translated_507_residues
MRFGDILRLCRQNLWRRKSRTILTVLGVIVGCCSIVLMVSLGQGINEQMNALIKSMGDLSIVTVYADGGPDRAERGGSST
GSGAKLDDKALESFRAMNGVDGVTPMMDFPYTVTARAGAGGRYLHDYVQVMGVDMTQFDRMGYKLVGGEKPFRDDQVLAG
ETFAYGFLDTLRNGERRMGAGDGMTPPCVSGADAQCEGRRDEKPFFDPLVTRIRVTTGVNYQGDQYTMSMQGGGSAGAAG
AGGAAGRSENITLDLQISGVTASDYGKGFATSDGLIMDVKAMKALAAKVNPSARKSDTYSQVLVKAADLGSVPEVESQIK
ALGYETSSYEDMRRSMDEQSRAVQLILGGIGAVALLVAAIGIANTMIMSVTERTREIGIMKALGCYVRDIRIMFLAEAGA
IGFFGGLIGCALSGLVSLGINVAGMLYASGAPGAPGGGDGAQSGASLWTILRQAIVGGENVTRYSVIPWWLFLFAVLFST
LIGLLFGFGPANKAVKIPALDAIKNNE
>Mature_507_residues
MRFGDILRLCRQNLWRRKSRTILTVLGVIVGCCSIVLMVSLGQGINEQMNALIKSMGDLSIVTVYADGGPDRAERGGSST
GSGAKLDDKALESFRAMNGVDGVTPMMDFPYTVTARAGAGGRYLHDYVQVMGVDMTQFDRMGYKLVGGEKPFRDDQVLAG
ETFAYGFLDTLRNGERRMGAGDGMTPPCVSGADAQCEGRRDEKPFFDPLVTRIRVTTGVNYQGDQYTMSMQGGGSAGAAG
AGGAAGRSENITLDLQISGVTASDYGKGFATSDGLIMDVKAMKALAAKVNPSARKSDTYSQVLVKAADLGSVPEVESQIK
ALGYETSSYEDMRRSMDEQSRAVQLILGGIGAVALLVAAIGIANTMIMSVTERTREIGIMKALGCYVRDIRIMFLAEAGA
IGFFGGLIGCALSGLVSLGINVAGMLYASGAPGAPGGGDGAQSGASLWTILRQAIVGGENVTRYSVIPWWLFLFAVLFST
LIGLLFGFGPANKAVKIPALDAIKNNE

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=180, Percent_Identity=29.4444444444444, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 53485; Mature: 53485

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFGDILRLCRQNLWRRKSRTILTVLGVIVGCCSIVLMVSLGQGINEQMNALIKSMGDLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
IVTVYADGGPDRAERGGSSTGSGAKLDDKALESFRAMNGVDGVTPMMDFPYTVTARAGAG
EEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
GRYLHDYVQVMGVDMTQFDRMGYKLVGGEKPFRDDQVLAGETFAYGFLDTLRNGERRMGA
CHHHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHCCCHHCCC
GDGMTPPCVSGADAQCEGRRDEKPFFDPLVTRIRVTTGVNYQGDQYTMSMQGGGSAGAAG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEHEECCCCCCCEEEEEECCCCCCCCCC
AGGAAGRSENITLDLQISGVTASDYGKGFATSDGLIMDVKAMKALAAKVNPSARKSDTYS
CCCCCCCCCCEEEEEEEECEEHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHH
QVLVKAADLGSVPEVESQIKALGYETSSYEDMRRSMDEQSRAVQLILGGIGAVALLVAAI
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIANTMIMSVTERTREIGIMKALGCYVRDIRIMFLAEAGAIGFFGGLIGCALSGLVSLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCC
NVAGMLYASGAPGAPGGGDGAQSGASLWTILRQAIVGGENVTRYSVIPWWLFLFAVLFST
CHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
LIGLLFGFGPANKAVKIPALDAIKNNE
HHHHHHCCCCCCCEEECCCHHHCCCCC
>Mature Secondary Structure
MRFGDILRLCRQNLWRRKSRTILTVLGVIVGCCSIVLMVSLGQGINEQMNALIKSMGDLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
IVTVYADGGPDRAERGGSSTGSGAKLDDKALESFRAMNGVDGVTPMMDFPYTVTARAGAG
EEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
GRYLHDYVQVMGVDMTQFDRMGYKLVGGEKPFRDDQVLAGETFAYGFLDTLRNGERRMGA
CHHHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHCCCHHCCC
GDGMTPPCVSGADAQCEGRRDEKPFFDPLVTRIRVTTGVNYQGDQYTMSMQGGGSAGAAG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEHEECCCCCCCEEEEEECCCCCCCCCC
AGGAAGRSENITLDLQISGVTASDYGKGFATSDGLIMDVKAMKALAAKVNPSARKSDTYS
CCCCCCCCCCEEEEEEEECEEHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHH
QVLVKAADLGSVPEVESQIKALGYETSSYEDMRRSMDEQSRAVQLILGGIGAVALLVAAI
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIANTMIMSVTERTREIGIMKALGCYVRDIRIMFLAEAGAIGFFGGLIGCALSGLVSLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCC
NVAGMLYASGAPGAPGGGDGAQSGASLWTILRQAIVGGENVTRYSVIPWWLFLFAVLFST
CHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
LIGLLFGFGPANKAVKIPALDAIKNNE
HHHHHHCCCCCCCEEECCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]