| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692824
Identifier: 213692824
GI number: 213692824
Start: 2148379
End: 2149098
Strand: Reverse
Name: 213692824
Synonym: Blon_1964
Alternate gene names: NA
Gene position: 2149098-2148379 (Counterclockwise)
Preceding gene: 213692836
Following gene: 213692823
Centisome position: 75.87
GC content: 63.19
Gene sequence:
>720_bases GTGGTGCTGCTCACCGGCGCCGACCGCCTGAGCCTGGACTCCGTGACGTTCTCGTTGGTCGATTCCTTCCCATCCGTATG CTCGATTGCTTATGACGTGCGCCCGAACGAAGCCGTGGAATCCGGTCTCGATATCGTGCGCAACGTCGCGAAGCCCCAGG CAAGCGGGGTGGTGTTCGGCGAGTCCGATTCGTTCGGGCTCGAGGGGTGCTGCATGAGCTGCACGGTCAAACATGACCTT GAACGGACGCTCGGATCGCTGCAAGGGCGGGCCGGCGCGTTTCTGGTCTCGCTGCCTGTGGGCCTTGAGGCCACGCCGGT CGCGCAGTATCTGGCCGATTCCTTCCGTCTCAACGAGTGGGGTGAGTCGATGTTCGTGGGTGCGGTGGCCAATGCCGTAG GCCTTGACGAATTCGAAGAGCGATTCTTTGACGACGACCGTTTGTGCCTGTACGGCATGGGCGAGGAGAACGGCGTCTAT GACGAGCGTTCGACCGGCGTAGTGGTCTCCCGCCTGATCCGTGAGGCCTCGTGCGTGCTCGAATTGCCGGTCATTGGTGC CGGTTGCCTGGCACGCCATTTGGATACAGACGGGGAGTGCGCCTGCCGCGACATCATCCGTGCAATCGCCTTGCGTGATG CGCTGGTCTGTGAGGATGCCCACACCGTGGGGCTCGTCGACCTGGTGCAGGCGTCGGTCTGTGCCGCGATGCCGTTGTGA
Upstream 100 bases:
>100_bases CCTGCAACTATATCATAATGATAACCATTATCAAATCAGAAAGGCTGTCATGATTCATCCGGCATTGCAATCACAGGGAA ACGCGGAGGGGCGCACGCCC
Downstream 100 bases:
>100_bases CATGTGCGGCAAACGGCAGAACCCCCGCGTCCGAACGAAGGTGGCGCGGGATTTCTGTCGTTTCCGAGGCCTTAAATGGC AGAACCCCCGCGCGGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MVLLTGADRLSLDSVTFSLVDSFPSVCSIAYDVRPNEAVESGLDIVRNVAKPQASGVVFGESDSFGLEGCCMSCTVKHDL ERTLGSLQGRAGAFLVSLPVGLEATPVAQYLADSFRLNEWGESMFVGAVANAVGLDEFEERFFDDDRLCLYGMGEENGVY DERSTGVVVSRLIREASCVLELPVIGAGCLARHLDTDGECACRDIIRAIALRDALVCEDAHTVGLVDLVQASVCAAMPL
Sequences:
>Translated_239_residues MVLLTGADRLSLDSVTFSLVDSFPSVCSIAYDVRPNEAVESGLDIVRNVAKPQASGVVFGESDSFGLEGCCMSCTVKHDL ERTLGSLQGRAGAFLVSLPVGLEATPVAQYLADSFRLNEWGESMFVGAVANAVGLDEFEERFFDDDRLCLYGMGEENGVY DERSTGVVVSRLIREASCVLELPVIGAGCLARHLDTDGECACRDIIRAIALRDALVCEDAHTVGLVDLVQASVCAAMPL >Mature_239_residues MVLLTGADRLSLDSVTFSLVDSFPSVCSIAYDVRPNEAVESGLDIVRNVAKPQASGVVFGESDSFGLEGCCMSCTVKHDL ERTLGSLQGRAGAFLVSLPVGLEATPVAQYLADSFRLNEWGESMFVGAVANAVGLDEFEERFFDDDRLCLYGMGEENGVY DERSTGVVVSRLIREASCVLELPVIGAGCLARHLDTDGECACRDIIRAIALRDALVCEDAHTVGLVDLVQASVCAAMPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25507; Mature: 25507
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLTGADRLSLDSVTFSLVDSFPSVCSIAYDVRPNEAVESGLDIVRNVAKPQASGVVFG CEEEECCCCCCHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEE ESDSFGLEGCCMSCTVKHDLERTLGSLQGRAGAFLVSLPVGLEATPVAQYLADSFRLNEW CCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH GESMFVGAVANAVGLDEFEERFFDDDRLCLYGMGEENGVYDERSTGVVVSRLIREASCVL HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEE ELPVIGAGCLARHLDTDGECACRDIIRAIALRDALVCEDAHTVGLVDLVQASVCAAMPL ECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVLLTGADRLSLDSVTFSLVDSFPSVCSIAYDVRPNEAVESGLDIVRNVAKPQASGVVFG CEEEECCCCCCHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEE ESDSFGLEGCCMSCTVKHDLERTLGSLQGRAGAFLVSLPVGLEATPVAQYLADSFRLNEW CCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH GESMFVGAVANAVGLDEFEERFFDDDRLCLYGMGEENGVYDERSTGVVVSRLIREASCVL HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEE ELPVIGAGCLARHLDTDGECACRDIIRAIALRDALVCEDAHTVGLVDLVQASVCAAMPL ECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA