| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692789
Identifier: 213692789
GI number: 213692789
Start: 2103703
End: 2104596
Strand: Direct
Name: 213692789
Synonym: Blon_1927
Alternate gene names: NA
Gene position: 2103703-2104596 (Clockwise)
Preceding gene: 213692788
Following gene: 213692793
Centisome position: 74.26
GC content: 57.83
Gene sequence:
>894_bases ATGGGAGGCGGAGAGGTGCGTAAGCAGGCCAAGTCGGTGTTCGAGATGATCGAACTGCTCAAGCAGCGCGGCCTGACCAT CGATGTGCCCGACATGCCAGGCATCCTGTTGGACAATAACTACTATCGCCTGTCCGCGTATTTCCGCCCGTTCCAGAAGG ATCCGGCGAACGGTGACAATGATTTCCGACCAGGTGCGAAGGTATCCGATTTCCTTACTCCCTTTATGCTGGACGACCAG TTCCGCCGCCTTATCCTTGAGGGCACCTCGCGTCTGGAACTGACACTCCGTGCGCGCCTCGCCTACAACCTGGCGCTGAA CGGCGACGCCTACAACTATGACGAGCCGGATTCCTATCGTGACATCGCGTATCCGAACGGCATGTTGAAGCGAGACGCCC TGATCTCGAACATCAAGGGCTGGGTGTCCCGTTCCCACGAAGTATGCATCCGCCACTACCGCCACCAGCACGAGCAGCCA CCGGTGTGGGCCGTGGTGGAGGTGCTACCGTTCGATACCTTGTCCAAGATGCTCCAGTTGCATCTGGACATGGATGCCGT GGCCAAGACAGTGCTCTCGCTGGGATTGTGCAAGAACCGCCGCCGTGCCTCGGAAATCGTGCACGCGATGGTTTACCTGC GCAACCTGTGCTCACATCACTCTCGCCTGTGGAACCGCGAGATGGTGATCACCCCGGCGGTGCTCAAGGACATGAGGGCG GCGTTCCCGGAATTTGCATACGAAGACAAATCAGTTGGCAACTCGCTGATTGTGCTCATGTATCTCGTTGACCGTATCAA CGGCGACCGGGAATACTCGCACAGAATCCTTGATTTCCTGGCACAGGATGATTCATACCGGCATGGCATCCTCCATCCGC TGCACTGGGACTAG
Upstream 100 bases:
>100_bases GGGCCACTTGCTTCTGTGCACCGGTTGATATACTGTTTATGTCAACAGTAGCCTCCAAGCCTCCTAACAGTGCTCAAATC CGGGGGCTCTTGTTTTATCC
Downstream 100 bases:
>100_bases AGCCGAGACAACAGCAAAGATCGGGACTGGTCCGCTAACCATCTAGGGTGTGTTTACGCTATTTAGGTTTTGCGTGATAA TTGTCGTATGTGTATGCCGG
Product: Abi family protein
Products: NA
Alternate protein names: Abortive Infection Bacteriophage Resistance Protein; Abi-Like Protein; Phage AbiD Protein; Abi-Like Family Protein; Abortive Infection Bacteriophage Resistance Protein Abi; Phage Resistance Protein; AbiD Phage Protein-Like; AbiF-Like Protein; Abi-Like
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGGGEVRKQAKSVFEMIELLKQRGLTIDVPDMPGILLDNNYYRLSAYFRPFQKDPANGDNDFRPGAKVSDFLTPFMLDDQ FRRLILEGTSRLELTLRARLAYNLALNGDAYNYDEPDSYRDIAYPNGMLKRDALISNIKGWVSRSHEVCIRHYRHQHEQP PVWAVVEVLPFDTLSKMLQLHLDMDAVAKTVLSLGLCKNRRRASEIVHAMVYLRNLCSHHSRLWNREMVITPAVLKDMRA AFPEFAYEDKSVGNSLIVLMYLVDRINGDREYSHRILDFLAQDDSYRHGILHPLHWD
Sequences:
>Translated_297_residues MGGGEVRKQAKSVFEMIELLKQRGLTIDVPDMPGILLDNNYYRLSAYFRPFQKDPANGDNDFRPGAKVSDFLTPFMLDDQ FRRLILEGTSRLELTLRARLAYNLALNGDAYNYDEPDSYRDIAYPNGMLKRDALISNIKGWVSRSHEVCIRHYRHQHEQP PVWAVVEVLPFDTLSKMLQLHLDMDAVAKTVLSLGLCKNRRRASEIVHAMVYLRNLCSHHSRLWNREMVITPAVLKDMRA AFPEFAYEDKSVGNSLIVLMYLVDRINGDREYSHRILDFLAQDDSYRHGILHPLHWD >Mature_296_residues GGGEVRKQAKSVFEMIELLKQRGLTIDVPDMPGILLDNNYYRLSAYFRPFQKDPANGDNDFRPGAKVSDFLTPFMLDDQF RRLILEGTSRLELTLRARLAYNLALNGDAYNYDEPDSYRDIAYPNGMLKRDALISNIKGWVSRSHEVCIRHYRHQHEQPP VWAVVEVLPFDTLSKMLQLHLDMDAVAKTVLSLGLCKNRRRASEIVHAMVYLRNLCSHHSRLWNREMVITPAVLKDMRAA FPEFAYEDKSVGNSLIVLMYLVDRINGDREYSHRILDFLAQDDSYRHGILHPLHWD
Specific function: Unknown
COG id: COG4823
COG function: function code V; Abortive infection bacteriophage resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34451; Mature: 34320
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGEVRKQAKSVFEMIELLKQRGLTIDVPDMPGILLDNNYYRLSAYFRPFQKDPANGDN CCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCEEEEEHHHCCCCCCCCCCCC DFRPGAKVSDFLTPFMLDDQFRRLILEGTSRLELTLRARLAYNLALNGDAYNYDEPDSYR CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCC DIAYPNGMLKRDALISNIKGWVSRSHEVCIRHYRHQHEQPPVWAVVEVLPFDTLSKMLQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHH HLDMDAVAKTVLSLGLCKNRRRASEIVHAMVYLRNLCSHHSRLWNREMVITPAVLKDMRA HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHH AFPEFAYEDKSVGNSLIVLMYLVDRINGDREYSHRILDFLAQDDSYRHGILHPLHWD HHHHHHCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GGGEVRKQAKSVFEMIELLKQRGLTIDVPDMPGILLDNNYYRLSAYFRPFQKDPANGDN CCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCEEEEEHHHCCCCCCCCCCCC DFRPGAKVSDFLTPFMLDDQFRRLILEGTSRLELTLRARLAYNLALNGDAYNYDEPDSYR CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCC DIAYPNGMLKRDALISNIKGWVSRSHEVCIRHYRHQHEQPPVWAVVEVLPFDTLSKMLQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHH HLDMDAVAKTVLSLGLCKNRRRASEIVHAMVYLRNLCSHHSRLWNREMVITPAVLKDMRA HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHH AFPEFAYEDKSVGNSLIVLMYLVDRINGDREYSHRILDFLAQDDSYRHGILHPLHWD HHHHHHCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA