| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is crcB2 [H]
Identifier: 213692780
GI number: 213692780
Start: 2094409
End: 2094945
Strand: Direct
Name: crcB2 [H]
Synonym: Blon_1917
Alternate gene names: 213692780
Gene position: 2094409-2094945 (Clockwise)
Preceding gene: 213692778
Following gene: 213692781
Centisome position: 73.94
GC content: 61.82
Gene sequence:
>537_bases ATGGGTTCGCAATCCCCATCCGCAGGTGCCCGGCCGATTACGCACACGACCACTCCCCCGGCGCGCAAGCTCCCCGATAT TCATCTTGATATTGTGTTGGTCGTCTTCTGCGGCGGCACTATTGGCACCGCGATTCGCTATGCGTTCGCGCAGATTCCCG CGGCTGGCAGCTTCCACACCGGCACGTTTGTGGCCAACATGCTGGCTTGCTTCTGCTATGCAGGGCTGACCGCTTACTTG GCCGGCGCTTCCCGGTTCGGTGCACGTTCCAAAGAACTTGCCAGTCGCGGACTCGGCATGGGCGTATGCGGTGGTTTGTC TACGATGTCGACGTTGGCATTGGAAGGCTTCACCGCGATTCGCGACGGTCAGGTGGCGGCCGGCATTGCCTATCTACTGG TGACGTTCGCGCTGGGTCTGGTTTGTGCGTCTGCCGGCGTGTGGGCAGGAACGCATCTGGCCGGCTCCTCGAACGCATCC GCCGAAGCGTCCGCTGATACGAATGCCGCTACGACCAGCAAGGGAGGTAAGGCGTGA
Upstream 100 bases:
>100_bases GTTTCGAACCGCACACTGCTGATAGTTCCTACACACGATTTGACATTGCATGAAATCGTTGTGTCTTCAGCAGGATTCAG CGGTTTCAGGAAAGGCTACT
Downstream 100 bases:
>100_bases TGACCGTATTCCTACCAATCTTGGTCTGCCTGTGCGGCGGCGTAGGCGCCTCCTGCCGCTATCTGCTTGACGCGACCATC AAAACGTATTGGCAACGCGC
Product: Camphor resistance CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGSQSPSAGARPITHTTTPPARKLPDIHLDIVLVVFCGGTIGTAIRYAFAQIPAAGSFHTGTFVANMLACFCYAGLTAYL AGASRFGARSKELASRGLGMGVCGGLSTMSTLALEGFTAIRDGQVAAGIAYLLVTFALGLVCASAGVWAGTHLAGSSNAS AEASADTNAATTSKGGKA
Sequences:
>Translated_178_residues MGSQSPSAGARPITHTTTPPARKLPDIHLDIVLVVFCGGTIGTAIRYAFAQIPAAGSFHTGTFVANMLACFCYAGLTAYL AGASRFGARSKELASRGLGMGVCGGLSTMSTLALEGFTAIRDGQVAAGIAYLLVTFALGLVCASAGVWAGTHLAGSSNAS AEASADTNAATTSKGGKA >Mature_177_residues GSQSPSAGARPITHTTTPPARKLPDIHLDIVLVVFCGGTIGTAIRYAFAQIPAAGSFHTGTFVANMLACFCYAGLTAYLA GASRFGARSKELASRGLGMGVCGGLSTMSTLALEGFTAIRDGQVAAGIAYLLVTFALGLVCASAGVWAGTHLAGSSNASA EASADTNAATTSKGGKA
Specific function: Unknown
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 17734; Mature: 17603
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSQSPSAGARPITHTTTPPARKLPDIHLDIVLVVFCGGTIGTAIRYAFAQIPAAGSFHT CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCH GTFVANMLACFCYAGLTAYLAGASRFGARSKELASRGLGMGVCGGLSTMSTLALEGFTAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH RDGQVAAGIAYLLVTFALGLVCASAGVWAGTHLAGSSNASAEASADTNAATTSKGGKA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSQSPSAGARPITHTTTPPARKLPDIHLDIVLVVFCGGTIGTAIRYAFAQIPAAGSFHT CCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCH GTFVANMLACFCYAGLTAYLAGASRFGARSKELASRGLGMGVCGGLSTMSTLALEGFTAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH RDGQVAAGIAYLLVTFALGLVCASAGVWAGTHLAGSSNASAEASADTNAATTSKGGKA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]