| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692771
Identifier: 213692771
GI number: 213692771
Start: 2081281
End: 2083185
Strand: Direct
Name: 213692771
Synonym: Blon_1907
Alternate gene names: NA
Gene position: 2081281-2083185 (Clockwise)
Preceding gene: 213692770
Following gene: 213692773
Centisome position: 73.47
GC content: 61.78
Gene sequence:
>1905_bases ATGAGCGCATCACCACAGACGGCCACCGGCCCAGCACCCGGCGCCAACGCCAGCGGCGTGGACGAAAGCGCAGCCGAAGC CGCACGGAACAAGCCAATCGGCACCGCCGAGTTTCGGCCTTCCGCCATCTTCTCCCATGACATGGTGCTACAACGCGGCA AGCCAATCGTATTGTTCGGCACCGGCACGCCTGGACGGCCCGTCGTGACCGTGCTGAGCACGGCAGATGGCAGCGCACTG ATTCGCCGTCAATCATCGCACTCCATCACGGACAGTGTCAGCACCATCGGATCGATCACCCCGGACGGCACCTGGATGGT TACGCTACCGCCACTGGAAGCCGGTGGACCGTACACGCTGACCATCTCCGACCGCACCAGCGTAACGCTTAAGTACTTTA ACGTCATGGTCGGCGAAGTATGGATTGCCAGCGGGCAAAGCAACATCGAATTCGAACTGCACAACGACCGTGATGCGGAT TCGGCCATCGCCGCATCCGATGATCCGCTGCTGCGCTTCTTCAATGTGCCCAAGTTCGGCGTGGTGGACAGCGAACTTAT CGCGGCCGAGAACCAGTCGGCCTGGCGACCCTGCTCCCCCGATTCCTGCAGCACGATGTCCGCAATCGCCTATTATTTCG CACGCAAACTACGGCGGGACCTGGGACCCGACGTACCGGTCGGTATCGTCGATTGCTATATCGGCGGTACGTCGATCACC TCGTGGATGAGCGAGCACATGCTCACCGCCACCGAGGCCGGGCGCGGCTATCTTGACCGCTACCATCAGCAAATCGACGG CAAAACCGATCAGCAGTTCCACGACGAAACCGACTCCTGGCAACGCACCTTTAATGCGTGGAATGAGCAGATCGCCGCCG CACAGGCTGCAGAACCGGACATCACGTGGGATGTGCTCGACGCCCGGTACGGCGAGTGCCCGTGGCCGCCGCCCGTCACC CCGTTCTCCCAATATCACGTCACCGGCGCATTCAACGCGATGGTGCGCCGGTTGGCCCCGTTCTCCACGCGCGGCGTGCT GTGGTATCAAGGCGAAGAGGACGAGCAGCGGTACGCCTCGTATCGCGAACTGCTGGGTTGCATGATCGGTGAATGGCGGG CGTTGTGGAGCCGGCGCGCAGGCGGCGATTTCAGTGATAGCTACAATGTGGGACGGATCGTCGCCGATGATGCCGCGCGC GGCCACGGTGCCGAACCAATCGCCGACACGCCTACCGCAACGGTCGGAAACGAGGCGGAACTGCCGTTCATCATCGTGCA ATTGCCACGTTGGATCGATCAGAAGGAATACAACAGTGACATTGATCGCATGTTCTGGCCTCATATTCGCGAAGCACAAG CCGATGCAGCACGTATCATTCCCGACGTGTATCTGGCGGTCACGTTCGACACCGGCGAGTTCAACAACATCCATCCGACC GACAAACGTCCGGTTGGCGAGCGCATCGCGTTGCAAGCCGAAGCCCATGTCTACGGGCTTCCCGTCCGCGCCGATGGTCC CGTATTCGTTTCGTTGGCATCCGCTGGCGAAACGGCCGATGAGCTGCAGGTGCGCTTTGGCAACGCCGACGGCCTGCATT TCGGACCGTGGTCTGGGAGCGACGACGCCGGGCACCTATCGGCAGTTCACTCGTCTGGATCCGGGGAAACAGAACCCTTG TGGACCGTGAATCGATGCGACGCGGCGGCTTCCGGCTTCGAAATCGCTGGATCGGACGGCATCTATCACCGTGCGGACGC ACGGATCGAGGCCGATACCGTGGTGCTTCATGCCAACGCGGTATCGCATCCGATCTGCGCACGTTACGGCTGGTTCAGTT GGGGCCCGGCACCGCTGTTCAACGCCTTCGGCCTGCCTGCGGCCCCATTCCGGATTCGCAAGTAA
Upstream 100 bases:
>100_bases TCACCACCTTCATCGAATCCCTCGGCCCTGCGATTTGGGACTGACCACCGTAGGCAACCCATCGGGACCCGCCGCTTACC ATCAAAAGAGAGGAACTCAC
Downstream 100 bases:
>100_bases CTTCGCTGATGGCGCCTTACTGCGCTGCTGGCAAGCGCACGATGATGGTGGCGCCTTGGCCTTTGGTGCTGGTCACGTCG ATGAATCCTCGGCTCAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Secreted Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase; Sialate O-Acetylesterase Homolog; Glycosyl Hydrolase
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSASPQTATGPAPGANASGVDESAAEAARNKPIGTAEFRPSAIFSHDMVLQRGKPIVLFGTGTPGRPVVTVLSTADGSAL IRRQSSHSITDSVSTIGSITPDGTWMVTLPPLEAGGPYTLTISDRTSVTLKYFNVMVGEVWIASGQSNIEFELHNDRDAD SAIAASDDPLLRFFNVPKFGVVDSELIAAENQSAWRPCSPDSCSTMSAIAYYFARKLRRDLGPDVPVGIVDCYIGGTSIT SWMSEHMLTATEAGRGYLDRYHQQIDGKTDQQFHDETDSWQRTFNAWNEQIAAAQAAEPDITWDVLDARYGECPWPPPVT PFSQYHVTGAFNAMVRRLAPFSTRGVLWYQGEEDEQRYASYRELLGCMIGEWRALWSRRAGGDFSDSYNVGRIVADDAAR GHGAEPIADTPTATVGNEAELPFIIVQLPRWIDQKEYNSDIDRMFWPHIREAQADAARIIPDVYLAVTFDTGEFNNIHPT DKRPVGERIALQAEAHVYGLPVRADGPVFVSLASAGETADELQVRFGNADGLHFGPWSGSDDAGHLSAVHSSGSGETEPL WTVNRCDAAASGFEIAGSDGIYHRADARIEADTVVLHANAVSHPICARYGWFSWGPAPLFNAFGLPAAPFRIRK
Sequences:
>Translated_634_residues MSASPQTATGPAPGANASGVDESAAEAARNKPIGTAEFRPSAIFSHDMVLQRGKPIVLFGTGTPGRPVVTVLSTADGSAL IRRQSSHSITDSVSTIGSITPDGTWMVTLPPLEAGGPYTLTISDRTSVTLKYFNVMVGEVWIASGQSNIEFELHNDRDAD SAIAASDDPLLRFFNVPKFGVVDSELIAAENQSAWRPCSPDSCSTMSAIAYYFARKLRRDLGPDVPVGIVDCYIGGTSIT SWMSEHMLTATEAGRGYLDRYHQQIDGKTDQQFHDETDSWQRTFNAWNEQIAAAQAAEPDITWDVLDARYGECPWPPPVT PFSQYHVTGAFNAMVRRLAPFSTRGVLWYQGEEDEQRYASYRELLGCMIGEWRALWSRRAGGDFSDSYNVGRIVADDAAR GHGAEPIADTPTATVGNEAELPFIIVQLPRWIDQKEYNSDIDRMFWPHIREAQADAARIIPDVYLAVTFDTGEFNNIHPT DKRPVGERIALQAEAHVYGLPVRADGPVFVSLASAGETADELQVRFGNADGLHFGPWSGSDDAGHLSAVHSSGSGETEPL WTVNRCDAAASGFEIAGSDGIYHRADARIEADTVVLHANAVSHPICARYGWFSWGPAPLFNAFGLPAAPFRIRK >Mature_633_residues SASPQTATGPAPGANASGVDESAAEAARNKPIGTAEFRPSAIFSHDMVLQRGKPIVLFGTGTPGRPVVTVLSTADGSALI RRQSSHSITDSVSTIGSITPDGTWMVTLPPLEAGGPYTLTISDRTSVTLKYFNVMVGEVWIASGQSNIEFELHNDRDADS AIAASDDPLLRFFNVPKFGVVDSELIAAENQSAWRPCSPDSCSTMSAIAYYFARKLRRDLGPDVPVGIVDCYIGGTSITS WMSEHMLTATEAGRGYLDRYHQQIDGKTDQQFHDETDSWQRTFNAWNEQIAAAQAAEPDITWDVLDARYGECPWPPPVTP FSQYHVTGAFNAMVRRLAPFSTRGVLWYQGEEDEQRYASYRELLGCMIGEWRALWSRRAGGDFSDSYNVGRIVADDAARG HGAEPIADTPTATVGNEAELPFIIVQLPRWIDQKEYNSDIDRMFWPHIREAQADAARIIPDVYLAVTFDTGEFNNIHPTD KRPVGERIALQAEAHVYGLPVRADGPVFVSLASAGETADELQVRFGNADGLHFGPWSGSDDAGHLSAVHSSGSGETEPLW TVNRCDAAASGFEIAGSDGIYHRADARIEADTVVLHANAVSHPICARYGWFSWGPAPLFNAFGLPAAPFRIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=237, Percent_Identity=29.957805907173, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69045; Mature: 68914
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPQTATGPAPGANASGVDESAAEAARNKPIGTAEFRPSAIFSHDMVLQRGKPIVLFG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE TGTPGRPVVTVLSTADGSALIRRQSSHSITDSVSTIGSITPDGTWMVTLPPLEAGGPYTL CCCCCCCEEEEEECCCCHHEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEE TISDRTSVTLKYFNVMVGEVWIASGQSNIEFELHNDRDADSAIAASDDPLLRFFNVPKFG EECCCCEEEEEHHHHHEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEECCCCCC VVDSELIAAENQSAWRPCSPDSCSTMSAIAYYFARKLRRDLGPDVPVGIVDCYIGGTSIT CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHH SWMSEHMLTATEAGRGYLDRYHQQIDGKTDQQFHDETDSWQRTFNAWNEQIAAAQAAEPD HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC ITWDVLDARYGECPWPPPVTPFSQYHVTGAFNAMVRRLAPFSTRGVLWYQGEEDEQRYAS CEEEEHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH YRELLGCMIGEWRALWSRRAGGDFSDSYNVGRIVADDAARGHGAEPIADTPTATVGNEAE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC LPFIIVQLPRWIDQKEYNSDIDRMFWPHIREAQADAARIIPDVYLAVTFDTGEFNNIHPT CCEEEEECCHHHCHHHHCCCHHHHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCC DKRPVGERIALQAEAHVYGLPVRADGPVFVSLASAGETADELQVRFGNADGLHFGPWSGS CCCCCCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCCHHEEEEECCCCCCEECCCCCC DDAGHLSAVHSSGSGETEPLWTVNRCDAAASGFEIAGSDGIYHRADARIEADTVVLHANA CCCCCEEEEECCCCCCCCCEEEEHHHCCCCCCCEEECCCCCEECCCCEEEEEEEEEECCC VSHPICARYGWFSWGPAPLFNAFGLPAAPFRIRK CCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SASPQTATGPAPGANASGVDESAAEAARNKPIGTAEFRPSAIFSHDMVLQRGKPIVLFG CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE TGTPGRPVVTVLSTADGSALIRRQSSHSITDSVSTIGSITPDGTWMVTLPPLEAGGPYTL CCCCCCCEEEEEECCCCHHEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEE TISDRTSVTLKYFNVMVGEVWIASGQSNIEFELHNDRDADSAIAASDDPLLRFFNVPKFG EECCCCEEEEEHHHHHEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEECCCCCC VVDSELIAAENQSAWRPCSPDSCSTMSAIAYYFARKLRRDLGPDVPVGIVDCYIGGTSIT CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHH SWMSEHMLTATEAGRGYLDRYHQQIDGKTDQQFHDETDSWQRTFNAWNEQIAAAQAAEPD HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC ITWDVLDARYGECPWPPPVTPFSQYHVTGAFNAMVRRLAPFSTRGVLWYQGEEDEQRYAS CEEEEHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH YRELLGCMIGEWRALWSRRAGGDFSDSYNVGRIVADDAARGHGAEPIADTPTATVGNEAE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC LPFIIVQLPRWIDQKEYNSDIDRMFWPHIREAQADAARIIPDVYLAVTFDTGEFNNIHPT CCEEEEECCHHHCHHHHCCCHHHHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCC DKRPVGERIALQAEAHVYGLPVRADGPVFVSLASAGETADELQVRFGNADGLHFGPWSGS CCCCCCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCCHHEEEEECCCCCCEECCCCCC DDAGHLSAVHSSGSGETEPLWTVNRCDAAASGFEIAGSDGIYHRADARIEADTVVLHANA CCCCCEEEEECCCCCCCCCEEEEHHHCCCCCCCEEECCCCCEECCCCEEEEEEEEEECCC VSHPICARYGWFSWGPAPLFNAFGLPAAPFRIRK CCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA