| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692763
Identifier: 213692763
GI number: 213692763
Start: 2068988
End: 2069533
Strand: Reverse
Name: 213692763
Synonym: Blon_1898
Alternate gene names: NA
Gene position: 2069533-2068988 (Counterclockwise)
Preceding gene: 213692764
Following gene: 213692762
Centisome position: 73.06
GC content: 59.52
Gene sequence:
>546_bases ATGAGCTTGATTGAGATGATGATTCTGGGGTTCTTAAGCGAACGATCCATGTGCGGCTACGAACTGCGCAAGAAGATGGA ACAGCTGCAGGGCTACGCGCGCAAATTCAGCGACGGCACGGTATATCCGGCGACCAACCGACTCGTCGAAGCCGGCCTGA TTTCCGAACAGTCTGAGATCCGCGATGGCCGTCAGCGCCGCGTATTCACCCTGCTTGAGGCGGGCCGCAACAAACTCATC GAGGAACTGCGCAACACCGGCGGATTCAACCTCACCGATATCACCCGCTGGACCGTCGTGCTCACCTTCCTTGGTGTTGT TCCGGATAAATCAGACCGTGACGCGGTGCTGCGCCGCCGCTACGACCTGCTGAACGGCCATGACGTGCACTTCTTCTACT GCGACGCCGGCAACCCGCTCTCCATCGAGCAGATCGACGACCCCTACCGCCGCGGCATCATCGCCGTGCATGACGCCGAA ATCGCCGCCGAGCTCGACTGGTTGCGCTCAATGCTGGGTATCGAAGACGAGTCTGTGGCACAATAG
Upstream 100 bases:
>100_bases CATATCTCGTTTCGAGGTATTTCTCGCTGTTGAGATACACTATACATCGAAACGACACATATCGAAACGTGGCGTGTCGA AACGAGGTAGACTGGTGATC
Downstream 100 bases:
>100_bases TTCGACTGGCACAGTCGCCGCAGCAACTAACAGGAGACGATGATGACCGAAGGCAAGCCGATCGCCAAGCCGATGATCGA TGACGCCACGCGTGAGAAAA
Product: transcriptional regulator, PadR-like family
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSLIEMMILGFLSERSMCGYELRKKMEQLQGYARKFSDGTVYPATNRLVEAGLISEQSEIRDGRQRRVFTLLEAGRNKLI EELRNTGGFNLTDITRWTVVLTFLGVVPDKSDRDAVLRRRYDLLNGHDVHFFYCDAGNPLSIEQIDDPYRRGIIAVHDAE IAAELDWLRSMLGIEDESVAQ
Sequences:
>Translated_181_residues MSLIEMMILGFLSERSMCGYELRKKMEQLQGYARKFSDGTVYPATNRLVEAGLISEQSEIRDGRQRRVFTLLEAGRNKLI EELRNTGGFNLTDITRWTVVLTFLGVVPDKSDRDAVLRRRYDLLNGHDVHFFYCDAGNPLSIEQIDDPYRRGIIAVHDAE IAAELDWLRSMLGIEDESVAQ >Mature_180_residues SLIEMMILGFLSERSMCGYELRKKMEQLQGYARKFSDGTVYPATNRLVEAGLISEQSEIRDGRQRRVFTLLEAGRNKLIE ELRNTGGFNLTDITRWTVVLTFLGVVPDKSDRDAVLRRRYDLLNGHDVHFFYCDAGNPLSIEQIDDPYRRGIIAVHDAEI AAELDWLRSMLGIEDESVAQ
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20732; Mature: 20601
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIEMMILGFLSERSMCGYELRKKMEQLQGYARKFSDGTVYPATNRLVEAGLISEQSEI CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH RDGRQRRVFTLLEAGRNKLIEELRNTGGFNLTDITRWTVVLTFLGVVPDKSDRDAVLRRR HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YDLLNGHDVHFFYCDAGNPLSIEQIDDPYRRGIIAVHDAEIAAELDWLRSMLGIEDESVA HHHCCCCCEEEEEECCCCCCCHHHCCCHHHCCEEEEECHHHHHHHHHHHHHHCCCCHHCC Q C >Mature Secondary Structure SLIEMMILGFLSERSMCGYELRKKMEQLQGYARKFSDGTVYPATNRLVEAGLISEQSEI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH RDGRQRRVFTLLEAGRNKLIEELRNTGGFNLTDITRWTVVLTFLGVVPDKSDRDAVLRRR HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YDLLNGHDVHFFYCDAGNPLSIEQIDDPYRRGIIAVHDAEIAAELDWLRSMLGIEDESVA HHHCCCCCEEEEEECCCCCCCHHHCCCHHHCCEEEEECHHHHHHHHHHHHHHCCCCHHCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA