| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692729
Identifier: 213692729
GI number: 213692729
Start: 2032441
End: 2033118
Strand: Direct
Name: 213692729
Synonym: Blon_1863
Alternate gene names: NA
Gene position: 2032441-2033118 (Clockwise)
Preceding gene: 213692723
Following gene: 213692734
Centisome position: 71.75
GC content: 54.42
Gene sequence:
>678_bases ATGGGCAAGCATACGCAGAATTGCACGTTGATAGGCAAAGGAGTCTACGGCACCATAGGAGTAGACCAACGTTCCCGTCT TGCCGATGGCGCGCATTTTCACACCATGATTGTGACCAGCACCCTCGAGGCCTCAGTTATAGAAGGGGACAACCTGGTCA TCAAGAGTGGCATTGTGCGGTGTGATGGTGATATTCGCGTATCCGGCATCAGTGGCAGCGGCGACATCGAAGTCGGCGGC GACATTATCTGCGATGAAGTAACCTTTACCGGCAAACTACGATGCAACGGCGATATCGTCTGTTCCGGAAATCTGTCCGT CAATGGCTCCCTGCAAGACCCCCGTCATATTAGCGGTCAGACAGTTCACTTGAACGGTGTGCTGAAAGGTCATGACATCA ACAGCAGGGCGCTGGAAGTTCATCCACTGCGCAGTACGATGTTTTCTCGTTTTGATATGGATGGGTATGAGGATGGCAGC ACGGTTCGCCATATCACAGCCGTCACGGTTGAAGCCAACCATCTGCAATGCCAGACTTTGACGGCGGACTCCGCCATGCT ACGCAACGGCAGTGCGGTGGAAAGCGCCACGTGCGCCACCGCAATAGGCATCGACCGTACCTCCAGCGTGCTGCTGGTGA ACGGAGACTGCCAACGCATTCATCTCAAGACAGCGTAA
Upstream 100 bases:
>100_bases CTCACATCGTGACCGATATAACCCCCTCAACATGGATGCGCTCATTATTGTGGCAATAAGCCATAAAGCTGTACGTCCAT ATTGAGGGAGTTTTATCATC
Downstream 100 bases:
>100_bases AGCAGGTATTCCTCATTACCGTGGGTGCCGATGATGGGACTATCGGCAGTGGCCACCACGTCAAGTCCGTGCTGTTCAGC ACAGGCGACCACGTCGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGKHTQNCTLIGKGVYGTIGVDQRSRLADGAHFHTMIVTSTLEASVIEGDNLVIKSGIVRCDGDIRVSGISGSGDIEVGG DIICDEVTFTGKLRCNGDIVCSGNLSVNGSLQDPRHISGQTVHLNGVLKGHDINSRALEVHPLRSTMFSRFDMDGYEDGS TVRHITAVTVEANHLQCQTLTADSAMLRNGSAVESATCATAIGIDRTSSVLLVNGDCQRIHLKTA
Sequences:
>Translated_225_residues MGKHTQNCTLIGKGVYGTIGVDQRSRLADGAHFHTMIVTSTLEASVIEGDNLVIKSGIVRCDGDIRVSGISGSGDIEVGG DIICDEVTFTGKLRCNGDIVCSGNLSVNGSLQDPRHISGQTVHLNGVLKGHDINSRALEVHPLRSTMFSRFDMDGYEDGS TVRHITAVTVEANHLQCQTLTADSAMLRNGSAVESATCATAIGIDRTSSVLLVNGDCQRIHLKTA >Mature_224_residues GKHTQNCTLIGKGVYGTIGVDQRSRLADGAHFHTMIVTSTLEASVIEGDNLVIKSGIVRCDGDIRVSGISGSGDIEVGGD IICDEVTFTGKLRCNGDIVCSGNLSVNGSLQDPRHISGQTVHLNGVLKGHDINSRALEVHPLRSTMFSRFDMDGYEDGST VRHITAVTVEANHLQCQTLTADSAMLRNGSAVESATCATAIGIDRTSSVLLVNGDCQRIHLKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23820; Mature: 23689
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKHTQNCTLIGKGVYGTIGVDQRSRLADGAHFHTMIVTSTLEASVIEGDNLVIKSGIVR CCCCCCCEEEEECCEEEEECCCCCHHHCCCCEEEEEEEEECCEEEEEECCCEEEECCEEE CDGDIRVSGISGSGDIEVGGDIICDEVTFTGKLRCNGDIVCSGNLSVNGSLQDPRHISGQ ECCCEEEEEECCCCCEEECCEEEEECEEEEEEEEECCCEEEECCEEEECCCCCCCCCCCC TVHLNGVLKGHDINSRALEVHPLRSTMFSRFDMDGYEDGSTVRHITAVTVEANHLQCQTL EEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCEEEEEE TADSAMLRNGSAVESATCATAIGIDRTSSVLLVNGDCQRIHLKTA ECCHHHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEEC >Mature Secondary Structure GKHTQNCTLIGKGVYGTIGVDQRSRLADGAHFHTMIVTSTLEASVIEGDNLVIKSGIVR CCCCCCEEEEECCEEEEECCCCCHHHCCCCEEEEEEEEECCEEEEEECCCEEEECCEEE CDGDIRVSGISGSGDIEVGGDIICDEVTFTGKLRCNGDIVCSGNLSVNGSLQDPRHISGQ ECCCEEEEEECCCCCEEECCEEEEECEEEEEEEEECCCEEEECCEEEECCCCCCCCCCCC TVHLNGVLKGHDINSRALEVHPLRSTMFSRFDMDGYEDGSTVRHITAVTVEANHLQCQTL EEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCEEEEEE TADSAMLRNGSAVESATCATAIGIDRTSSVLLVNGDCQRIHLKTA ECCHHHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA