| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692707
Identifier: 213692707
GI number: 213692707
Start: 2005332
End: 2005778
Strand: Reverse
Name: 213692707
Synonym: Blon_1840
Alternate gene names: NA
Gene position: 2005778-2005332 (Counterclockwise)
Preceding gene: 213692708
Following gene: 213692706
Centisome position: 70.81
GC content: 53.69
Gene sequence:
>447_bases TTGGGGAACGGGATGAAACTGCTGTTTGACACGAATATTCTGCTCGATTTGTGCAATGACAAACGAGCGCCTTTCCATAA ACAATGTGTTGATTTGCTCATGGAAGCCGTTGCACAGCCAAACATTGAGATCATGGCGCCGGTATCGTCATTGAATGACG TGTATTGCGTGTTGCGCAAGCATTATGGTGAGGAGCGGGCGGCGCGAGACGATATCGGTGGACTGATGGAATTGTTCGAC ATCCGTCCACTTATGGAACGCCATGCGTGTATGTCGTACCGGTCCGATGAGCCCGACTTCGAGGACGGGATCATCCGTGC CGTTGCCGAGGACAATGACGCCGACGTCATCGTGACTCGTGACGTCGAAGCGTTTCACCATTCATCGGTCCGATCGATGG ATGCCGAGCAATGCCGCGCCCTGCTGCTTGCCGATTCCAAGGCTTGA
Upstream 100 bases:
>100_bases AAGCAGGAGCTGATTCAACGTTTCGCCGACCGGAATTTGCCGGAGGCGGAAGGCGATCTTTCGGATGAGGAGATTCTCGC GCAGGCACGTATGGAACGAT
Downstream 100 bases:
>100_bases CGGCGGCGTTGAGTACAATCTTGACGGTTGAATCCGGCCGGGCATGGGCCAGTGCGCGAGGCGAACGCGCGCATGACGTA CGGAACGTACGGAACGTGCA
Product: PilT protein domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGNGMKLLFDTNILLDLCNDKRAPFHKQCVDLLMEAVAQPNIEIMAPVSSLNDVYCVLRKHYGEERAARDDIGGLMELFD IRPLMERHACMSYRSDEPDFEDGIIRAVAEDNDADVIVTRDVEAFHHSSVRSMDAEQCRALLLADSKA
Sequences:
>Translated_148_residues MGNGMKLLFDTNILLDLCNDKRAPFHKQCVDLLMEAVAQPNIEIMAPVSSLNDVYCVLRKHYGEERAARDDIGGLMELFD IRPLMERHACMSYRSDEPDFEDGIIRAVAEDNDADVIVTRDVEAFHHSSVRSMDAEQCRALLLADSKA >Mature_147_residues GNGMKLLFDTNILLDLCNDKRAPFHKQCVDLLMEAVAQPNIEIMAPVSSLNDVYCVLRKHYGEERAARDDIGGLMELFDI RPLMERHACMSYRSDEPDFEDGIIRAVAEDNDADVIVTRDVEAFHHSSVRSMDAEQCRALLLADSKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16686; Mature: 16555
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNGMKLLFDTNILLDLCNDKRAPFHKQCVDLLMEAVAQPNIEIMAPVSSLNDVYCVLRK CCCCEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH HYGEERAARDDIGGLMELFDIRPLMERHACMSYRSDEPDFEDGIIRAVAEDNDADVIVTR HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEHCCCCCCCCEEEEC DVEAFHHSSVRSMDAEQCRALLLADSKA CHHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure GNGMKLLFDTNILLDLCNDKRAPFHKQCVDLLMEAVAQPNIEIMAPVSSLNDVYCVLRK CCCEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH HYGEERAARDDIGGLMELFDIRPLMERHACMSYRSDEPDFEDGIIRAVAEDNDADVIVTR HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEHCCCCCCCCEEEEC DVEAFHHSSVRSMDAEQCRALLLADSKA CHHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA