| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is aroB [H]
Identifier: 213692700
GI number: 213692700
Start: 1996168
End: 1997169
Strand: Reverse
Name: aroB [H]
Synonym: Blon_1833
Alternate gene names: 213692700
Gene position: 1997169-1996168 (Counterclockwise)
Preceding gene: 213692701
Following gene: 213692654
Centisome position: 70.5
GC content: 61.68
Gene sequence:
>1002_bases ATGAGCAAGGAATCCGTAACCGTCGCCGGCATTGATTGCGGCACGAACTCCATTCGACTGAAGATCGCACGTGTCGATGC CGATGGCATGCATGAGGTGGTGCCGCGCATCCTGCGTGTGATCCGCCTTGGTCAGGATGTGGACAAGACCCATCGTTTTG CCGACGAAGCGTTGGAACGCGCCTATGTGGCCGCTCGGGAATTCGCCGGTGTGATTGCCGAGCATCCCATCGACGGTCTG CGTTTCGTTGCCACCTCCGCCACTCGTGACGCGGAAAACCGTGAGGAGTTCGAGGATGAGATCGAACGTATCCTCGGCGT GCGCCCCGAAGTCATTCCCGGCACTGAAGAAGCCGACCTGAGCTTCCTCGGCGCCACTTCCGTGGTCAATCGCGACGATC TGCCCGCCCCCTATCTGGTGGTTGACCTCGGCGGCGGGTCCACCGAGCTGGTCATCGGTGGCGACGGCGTCAGTGCGCCC ACTACCCAGGTTCAGGGCGCGTTTTCCATGAACATCGGTTCCGTGCGCATGACCGAACGTCATCTGACCAACGATCCGCC GACCCAGACACAGATCGATGAGGCCGTTGCGGACGTCGATGAACATATCGATGAGGCCTTCCGCACCGTGGACGCAGGCA AGGCCCGTACCATCATCGGCGTGTCCGGCACGGTGACCACGATGACCGCCTTGGCCATGGGATTGAAGGAATACGATCAC ACCGTGGTCGACGGGCATCGGTTGAGCTTTGAAGACGCCTATGCCGTGGACGACAAGTTCCTTAGGATGACGCGCGCCGA GCGCCGCGAATACAAGACCATCCACCCCGGCCGTATCGATGTGGTCGGCGGCGGCGCTGTGGTGTGGAGCCGTGTGCTGG CGCGTGTCAGCGAAGCCGCCAAGGCCGATCATGGTGAAGCCATCGATTCGTTCGTCGCCAGCGAGCACGGGCTGCTGGAC GGCATTGTGCTCGATTATGGTCGCCGGTTGCTGGCTCAATAG
Upstream 100 bases:
>100_bases TCGATCCGACCGTCTGCCGTTGCACACTGGACGATTGATCAACAGATGAGCCACCGCGAACAGCCCATTCATACGCACTA AGGGATACGAGGAGAAGGCA
Downstream 100 bases:
>100_bases CGTAAGTGGTAAGTACCCCCAGTGGGCTGAGTCGTTCAGCAAACAGCCCACTGGGCTGTTTGCTTTATATGCGACGCCGG CGACGCTATCGCTACCGGCT
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: 3-dehydroquinate synthase; Unknown phosphatase [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPIDGL RFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAP TTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFRTVDAGKARTIIGVSGTVTTMTALAMGLKEYDH TVVDGHRLSFEDAYAVDDKFLRMTRAERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAKADHGEAIDSFVASEHGLLD GIVLDYGRRLLAQ
Sequences:
>Translated_333_residues MSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPIDGL RFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAP TTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFRTVDAGKARTIIGVSGTVTTMTALAMGLKEYDH TVVDGHRLSFEDAYAVDDKFLRMTRAERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAKADHGEAIDSFVASEHGLLD GIVLDYGRRLLAQ >Mature_332_residues SKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPIDGLR FVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPT TQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFRTVDAGKARTIIGVSGTVTTMTALAMGLKEYDHT VVDGHRLSFEDAYAVDDKFLRMTRAERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAKADHGEAIDSFVASEHGLLDG IVLDYGRRLLAQ
Specific function: Conversion Of Pppgpp To Ppgpp. Guanosine Pentaphosphate (Pppgpp) Is A Cytoplasmic Signaling Molecule Which Together With Ppgpp Controls The "Stringent Response", An Adaptive Process That Allows Bacteria To Respond To Amino Acid Starvation, Resulting In T
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=280, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788848, Length=145, Percent_Identity=33.1034482758621, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR016037 - InterPro: IPR003695 [H]
Pfam domain/function: PF01761 DHQ_synthase; PF02541 Ppx-GppA [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 36120; Mature: 35989
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALER CCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AYVAAREFAGVIAEHPIDGLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADL HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC SFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTER EEECHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCEEEECCCCEEEHHH HLTNDPPTQTQIDEAVADVDEHIDEAFRTVDAGKARTIIGVSGTVTTMTALAMGLKEYDH HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCC TVVDGHRLSFEDAYAVDDKFLRMTRAERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAA EEECCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHH KADHGEAIDSFVASEHGLLDGIVLDYGRRLLAQ HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALER CCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AYVAAREFAGVIAEHPIDGLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADL HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC SFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTER EEECHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCEEEECCCCEEEHHH HLTNDPPTQTQIDEAVADVDEHIDEAFRTVDAGKARTIIGVSGTVTTMTALAMGLKEYDH HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCC TVVDGHRLSFEDAYAVDDKFLRMTRAERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAA EEECCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHH KADHGEAIDSFVASEHGLLDGIVLDYGRRLLAQ HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]