Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692687

Identifier: 213692687

GI number: 213692687

Start: 1981903

End: 1982280

Strand: Direct

Name: 213692687

Synonym: Blon_1820

Alternate gene names: NA

Gene position: 1981903-1982280 (Clockwise)

Preceding gene: 213692686

Following gene: 213692688

Centisome position: 69.96

GC content: 62.43

Gene sequence:

>378_bases
ATGGCGGTCAACGCGGAAAAACTCGTCATGGACTGGATCAACGCCGACCCGACGATCAAGGCCGAATATCCGGCCAGTTT
CGACGTGCCCGCCGAATCATCGGCCACGCACCCGATGCCGTTCGTCACCGTCGAACAGGTGGGAGGCTCGGACGAACGGT
TCCGTTCGCTGCCGCTTATTGCGGTGCAGGTGTGGGGCGAGTCGCGCTGGCTGGTCTCCGAAGCTGCGGCGAAACGCATC
CTCCCCCGGTTGAAACGTATCACGGAACTGCCCGAGGTCGCCGCCATCGACATCACCGGCCGCACGCATTTCCCCATGCC
GGACGGGCGGCCCCGTTATCAGATACTCATACGACTCACCGTCAAATCGGACGACTAA

Upstream 100 bases:

>100_bases
ACGTGGGCACCATCGCCCTCGTGCAGGCCGAGAACCATCAGGCGTTTGTCGACAACTCGGCCCACAACACGTTGGCCAAG
GCTTTGGGAGGTGGCGGCTG

Downstream 100 bases:

>100_bases
CGAAAGGTCTAAATCATGGCTGATTCCACAACCAACGATTCCACCATGGTGTCGTTGGGCAAGTTCAAGGTCGGCGGCTA
CGCCTACTGGGCACCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAVNAEKLVMDWINADPTIKAEYPASFDVPAESSATHPMPFVTVEQVGGSDERFRSLPLIAVQVWGESRWLVSEAAAKRI
LPRLKRITELPEVAAIDITGRTHFPMPDGRPRYQILIRLTVKSDD

Sequences:

>Translated_125_residues
MAVNAEKLVMDWINADPTIKAEYPASFDVPAESSATHPMPFVTVEQVGGSDERFRSLPLIAVQVWGESRWLVSEAAAKRI
LPRLKRITELPEVAAIDITGRTHFPMPDGRPRYQILIRLTVKSDD
>Mature_124_residues
AVNAEKLVMDWINADPTIKAEYPASFDVPAESSATHPMPFVTVEQVGGSDERFRSLPLIAVQVWGESRWLVSEAAAKRIL
PRLKRITELPEVAAIDITGRTHFPMPDGRPRYQILIRLTVKSDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13998; Mature: 13867

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNAEKLVMDWINADPTIKAEYPASFDVPAESSATHPMPFVTVEQVGGSDERFRSLPLI
CCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCEE
AVQVWGESRWLVSEAAAKRILPRLKRITELPEVAAIDITGRTHFPMPDGRPRYQILIRLT
EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEE
VKSDD
EECCC
>Mature Secondary Structure 
AVNAEKLVMDWINADPTIKAEYPASFDVPAESSATHPMPFVTVEQVGGSDERFRSLPLI
CCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCEE
AVQVWGESRWLVSEAAAKRILPRLKRITELPEVAAIDITGRTHFPMPDGRPRYQILIRLT
EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEE
VKSDD
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA