| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692683
Identifier: 213692683
GI number: 213692683
Start: 1980299
End: 1980862
Strand: Direct
Name: 213692683
Synonym: Blon_1816
Alternate gene names: NA
Gene position: 1980299-1980862 (Clockwise)
Preceding gene: 213692682
Following gene: 213692684
Centisome position: 69.91
GC content: 67.38
Gene sequence:
>564_bases ATGAGCCAGGCAGTCGAATTCCACCACCTGACCTCAGGGGTGGCGAACACCGCCCGCCAGGCGGTCATCGAAACCCAGTT CGTCGACGATAAGGGCAAACCCATCGACCTCAATGGCGGTTCTTCCACCCCATCTGCTGGCAGCGTCACGCCGGCCAGCC TCGGCGGCTATTCCTCCGGCACCGGTCACGGCAAGGTCGTGCAGGTCAAGGCCGATGGCAGCGGCTTCGACTTCGTCGCC CCGGTCACGGCCCCGACCGCCGACACGCTTACCGGTGCCACGGATACGGGCAAGAGTCTGCTCAAGGCGACTGACGCTGC GACGGCGCGCAAGGCCATCGGTGCCGGCACCAGCTCGTTCAGCGGCTCGTACGACGATTTGACGAACAAGCCGGCGAACC CTGCCGCCTACACGCTGCCCGCCGCGACCGCTGCGGCGTTGGGCGGAGTCAAGCAGGGTGCGGCCGTACCGGACCTCGCC ACCGACGCGAATACGACGACCGCGAACGCCAAGATCAACGCGCTGCTCGCCCAACTGCGTGCGGCCGGTGTGATCGCGGC CTGA
Upstream 100 bases:
>100_bases AGATCGCGCTCCGACTGGAGATCGTCTACGCCTGGTACGTGTTCACCGACCGCTTCGCTGTGGTCGAGGGCAACGCACCC ACCAGCAAGGCGGCCAAGTG
Downstream 100 bases:
>100_bases GGGAGGCGCGCTCATGGCCGATGACGCTGATCCGGGCATGAACGTGCCCGCTCCCCCGTTCGCCAGCGCCGATGATCTCG CCTCCCGTTGGCATGAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSQAVEFHHLTSGVANTARQAVIETQFVDDKGKPIDLNGGSSTPSAGSVTPASLGGYSSGTGHGKVVQVKADGSGFDFVA PVTAPTADTLTGATDTGKSLLKATDAATARKAIGAGTSSFSGSYDDLTNKPANPAAYTLPAATAAALGGVKQGAAVPDLA TDANTTTANAKINALLAQLRAAGVIAA
Sequences:
>Translated_187_residues MSQAVEFHHLTSGVANTARQAVIETQFVDDKGKPIDLNGGSSTPSAGSVTPASLGGYSSGTGHGKVVQVKADGSGFDFVA PVTAPTADTLTGATDTGKSLLKATDAATARKAIGAGTSSFSGSYDDLTNKPANPAAYTLPAATAAALGGVKQGAAVPDLA TDANTTTANAKINALLAQLRAAGVIAA >Mature_186_residues SQAVEFHHLTSGVANTARQAVIETQFVDDKGKPIDLNGGSSTPSAGSVTPASLGGYSSGTGHGKVVQVKADGSGFDFVAP VTAPTADTLTGATDTGKSLLKATDAATARKAIGAGTSSFSGSYDDLTNKPANPAAYTLPAATAAALGGVKQGAAVPDLAT DANTTTANAKINALLAQLRAAGVIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18301; Mature: 18170
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAVEFHHLTSGVANTARQAVIETQFVDDKGKPIDLNGGSSTPSAGSVTPASLGGYSSG CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC TGHGKVVQVKADGSGFDFVAPVTAPTADTLTGATDTGKSLLKATDAATARKAIGAGTSSF CCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SGSYDDLTNKPANPAAYTLPAATAAALGGVKQGAAVPDLATDANTTTANAKINALLAQLR CCCCCHHCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AAGVIAA HHCCCCC >Mature Secondary Structure SQAVEFHHLTSGVANTARQAVIETQFVDDKGKPIDLNGGSSTPSAGSVTPASLGGYSSG CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC TGHGKVVQVKADGSGFDFVAPVTAPTADTLTGATDTGKSLLKATDAATARKAIGAGTSSF CCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SGSYDDLTNKPANPAAYTLPAATAAALGGVKQGAAVPDLATDANTTTANAKINALLAQLR CCCCCHHCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AAGVIAA HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA