Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692676

Identifier: 213692676

GI number: 213692676

Start: 1973366

End: 1973716

Strand: Direct

Name: 213692676

Synonym: Blon_1809

Alternate gene names: NA

Gene position: 1973366-1973716 (Clockwise)

Preceding gene: 213692675

Following gene: 213692677

Centisome position: 69.66

GC content: 57.26

Gene sequence:

>351_bases
ATGAGCCGCAACGGATACAATCCACGACAACGCAACGGGCACAGGCGCAGGCAGAACAGGGCGCGGGTCAAAGCCGCCAA
CACATGCTGCTACATTTGCGGCAGACCAATCGACTACACACTGAAGTCACCTGACCCGTGGAGCTACGTGCTCGACGAAA
CAATCCCAATCGCACGAGGCGGCACGCTCACCTACAACAACAGCGGAGCCGCACACCGATGGTGCAACCAAATCAAAGGC
ACGCACACATTGGAATGGGCGCGCAGGGAAGTCGCCAATATTCTCAACGGCAAAGGTAAAGGCATGCAAGCGCGACCAAC
TTCAATCCCATTCACCCGGCTCGACGTGTGA

Upstream 100 bases:

>100_bases
CCCCCGACGGGCACATCATCGTGGACGACCTCACACCCGTCATCACGGCCTCCGCCCAAGCCTTTACCGACACATGGCAA
CGCCTCTGCGAGGGCACACC

Downstream 100 bases:

>100_bases
CCCCAGGGCGGTACACCCCACCCCACCGGCAGTGGCTCCCCCCGGCGCATAGAGCCGATATCTCCCCACGGTTTCGGTAA
CGGTAACGCGTTACGGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSRNGYNPRQRNGHRRRQNRARVKAANTCCYICGRPIDYTLKSPDPWSYVLDETIPIARGGTLTYNNSGAAHRWCNQIKG
THTLEWARREVANILNGKGKGMQARPTSIPFTRLDV

Sequences:

>Translated_116_residues
MSRNGYNPRQRNGHRRRQNRARVKAANTCCYICGRPIDYTLKSPDPWSYVLDETIPIARGGTLTYNNSGAAHRWCNQIKG
THTLEWARREVANILNGKGKGMQARPTSIPFTRLDV
>Mature_115_residues
SRNGYNPRQRNGHRRRQNRARVKAANTCCYICGRPIDYTLKSPDPWSYVLDETIPIARGGTLTYNNSGAAHRWCNQIKGT
HTLEWARREVANILNGKGKGMQARPTSIPFTRLDV

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13214; Mature: 13083

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNGYNPRQRNGHRRRQNRARVKAANTCCYICGRPIDYTLKSPDPWSYVLDETIPIARG
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCEECCCCCCCCCC
GTLTYNNSGAAHRWCNQIKGTHTLEWARREVANILNGKGKGMQARPTSIPFTRLDV
CEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
SRNGYNPRQRNGHRRRQNRARVKAANTCCYICGRPIDYTLKSPDPWSYVLDETIPIARG
CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCEECCCCCCCCCC
GTLTYNNSGAAHRWCNQIKGTHTLEWARREVANILNGKGKGMQARPTSIPFTRLDV
CEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA