| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692633
Identifier: 213692633
GI number: 213692633
Start: 1939590
End: 1940393
Strand: Reverse
Name: 213692633
Synonym: Blon_1766
Alternate gene names: NA
Gene position: 1940393-1939590 (Counterclockwise)
Preceding gene: 213692635
Following gene: 213692632
Centisome position: 68.5
GC content: 58.46
Gene sequence:
>804_bases ATGGTGGTACGTTCGTGGTCCGAACTTGATTTCGATAATGTCTGCTCCAACGCCAAGGTGTTCGGTTTCGATTTGGACAA CACGCTGGCCAGCTCAAAACAGCCGATGAAGCCCGCGATGATCGAACGGTTCTGTGCGTTGCTCGACCATACGGTGGTGG CCCTGATCTCAGGGGGCGGCATGGCGGTGGTCACCTCGCAGGTGCTGGATGTGCTCACCCCGAATGCCAGGCGCGGCAAT CTGCATGTCATGCCTACCTCCGGCTCCCGGTATTACCGGTGGGATGGCACGCAATGGGCCTTGGTGTATGCGCATGATCT GTCCGAAGCCACCGTGGCTGCTGTCTCGGAAAGTCTTGAGCGACATGCCCGGGAACTGGGATTGTGGGAACAGCAGGTAT GGGGGCCTCGAATCGAGAACAGGGGCAGCCAGATTACCTTCTCCGCTCTTGGACAGTTCGCATCCGTAGCGGCCAAGCAG GCATGGGATCGCGATAACACGAAGAAACAGGCGCTGGTCGAAGCGGTCAAGGCCGATCTGCCGCATATGCGGGTCAGGGC CGGCGGATACACCAGTGTGGATGTCAGCGAATGCGGCATCGATAAGGCCTATGCCGTGCGCAAGCTGACGCAGACACTTG GCATACGGGCCGATGAAATGGTGTTCGTGGGTGATCGCATGACGCCTACGGGTAATGACTATCCCGCGGTTGAGGCCGGT GCGATCGGTGTTCGTGTGGAGAATCCGCAAGATACGGTACAACTGCTGGATGCACTGCTTGCGCGATTCGATACTTCAGC TTGA
Upstream 100 bases:
>100_bases TGGCTGAAGCATGGTTCCCACCATAGGGCATGGCGGAGGCAACATGCGTTAGGATTGGTTCATTGGTTGTGAACATTCGT CAACGAGGGAGGCGCGACAG
Downstream 100 bases:
>100_bases TGGTGACGCGTTATGGACGGGCCGAGCGTATACAAGTGGTGGCATGTGATGTGGGCGCAGGCCTGCAATCTGCTGTTTCC ACGCGGCTGCGCTGGGTGTG
Product: HAD-superfamily hydrolase, subfamily IIB
Products: NA
Alternate protein names: Phosphomannomutase; HAD Family Hydrolase; HAD-Superfamily Hydrolase; HAD Superfamily Hydrolase; HAD Hydrolase Family IIB; Hydrolase; Eukaryotic Phosphomannomutase; Alpha-Phosphoglucomutase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MVVRSWSELDFDNVCSNAKVFGFDLDNTLASSKQPMKPAMIERFCALLDHTVVALISGGGMAVVTSQVLDVLTPNARRGN LHVMPTSGSRYYRWDGTQWALVYAHDLSEATVAAVSESLERHARELGLWEQQVWGPRIENRGSQITFSALGQFASVAAKQ AWDRDNTKKQALVEAVKADLPHMRVRAGGYTSVDVSECGIDKAYAVRKLTQTLGIRADEMVFVGDRMTPTGNDYPAVEAG AIGVRVENPQDTVQLLDALLARFDTSA
Sequences:
>Translated_267_residues MVVRSWSELDFDNVCSNAKVFGFDLDNTLASSKQPMKPAMIERFCALLDHTVVALISGGGMAVVTSQVLDVLTPNARRGN LHVMPTSGSRYYRWDGTQWALVYAHDLSEATVAAVSESLERHARELGLWEQQVWGPRIENRGSQITFSALGQFASVAAKQ AWDRDNTKKQALVEAVKADLPHMRVRAGGYTSVDVSECGIDKAYAVRKLTQTLGIRADEMVFVGDRMTPTGNDYPAVEAG AIGVRVENPQDTVQLLDALLARFDTSA >Mature_267_residues MVVRSWSELDFDNVCSNAKVFGFDLDNTLASSKQPMKPAMIERFCALLDHTVVALISGGGMAVVTSQVLDVLTPNARRGN LHVMPTSGSRYYRWDGTQWALVYAHDLSEATVAAVSESLERHARELGLWEQQVWGPRIENRGSQITFSALGQFASVAAKQ AWDRDNTKKQALVEAVKADLPHMRVRAGGYTSVDVSECGIDKAYAVRKLTQTLGIRADEMVFVGDRMTPTGNDYPAVEAG AIGVRVENPQDTVQLLDALLARFDTSA
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321063, Length=244, Percent_Identity=25.8196721311475, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29248; Mature: 29248
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVRSWSELDFDNVCSNAKVFGFDLDNTLASSKQPMKPAMIERFCALLDHTVVALISGGG CCCCCCCCCCHHHHCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC MAVVTSQVLDVLTPNARRGNLHVMPTSGSRYYRWDGTQWALVYAHDLSEATVAAVSESLE HHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHH RHARELGLWEQQVWGPRIENRGSQITFSALGQFASVAAKQAWDRDNTKKQALVEAVKADL HHHHHHCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC PHMRVRAGGYTSVDVSECGIDKAYAVRKLTQTLGIRADEMVFVGDRMTPTGNDYPAVEAG CCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECC AIGVRVENPQDTVQLLDALLARFDTSA EEEEEECCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVVRSWSELDFDNVCSNAKVFGFDLDNTLASSKQPMKPAMIERFCALLDHTVVALISGGG CCCCCCCCCCHHHHCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC MAVVTSQVLDVLTPNARRGNLHVMPTSGSRYYRWDGTQWALVYAHDLSEATVAAVSESLE HHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHH RHARELGLWEQQVWGPRIENRGSQITFSALGQFASVAAKQAWDRDNTKKQALVEAVKADL HHHHHHCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC PHMRVRAGGYTSVDVSECGIDKAYAVRKLTQTLGIRADEMVFVGDRMTPTGNDYPAVEAG CCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECC AIGVRVENPQDTVQLLDALLARFDTSA EEEEEECCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA