| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is prs [H]
Identifier: 213692593
GI number: 213692593
Start: 1893755
End: 1894774
Strand: Direct
Name: prs [H]
Synonym: Blon_1726
Alternate gene names: 213692593
Gene position: 1893755-1894774 (Clockwise)
Preceding gene: 213692592
Following gene: 213692594
Centisome position: 66.85
GC content: 64.02
Gene sequence:
>1020_bases GTGAGCGCAATCCTTGAAGGGAAGCCCGATAAGAATCTTATTCTCGTTACGGGAAGGATTCATCCGAAGTTGGCTGAGGA TGTCGCCGAGCAGCTCGGCATCGACGTCCTTGAAACCACCGCATACGATTTCGCCAACGGCGAGATGTACGTGCGCTACA CCGAATCGGTGCGTGGCGCCGATGTGTTCGTGCTGCAAAGCCATTACAAGCCCATCAACAAGGCGATCATGGAGCAGCTC ATCATGATCGACGCGCTGAAGCGCGCCTCGGCCCGTTCCATTACTGCGGTCTGCCCGTTGCTCGGCTACTCCCGTCAGGA CAAGAAGCACCGCGGCCGCGAGCCCATCTCCTGCCGTCTGGTGTTCGACCTGCTGAAGACCGCCGGTGCCGACCGCATCA TGTCGGTCGATCTGCATGCCGCGCAGTCCCAAGGCTTCTTCGACGGCCCGGTCGATCATCTGGTGGCCATGCCGGTGCTG GTCGACTACATCCGTGATCGTTTCCAGGACCATCTCGACAACGTCGCCGTCGTCTCCCCCGACGCCGGCCGCATTCGCGT AGCCGAGCAGTGGGCGCAGCGTCTCGGCGGCGGTCCTCTCGCTTTCGTGCACAAGACGCGCGACATCACCCGCCCGAACC AGGCGGTCGCCAACCGTGTGGTCGGCGACGTCGCCGGCAAGGACTGCGTGCTTGTCGATGACCTGATCGACACCGCGGGT ACCATCGCGGGCGCATGCCACGTGCTGCAGGACGCGGGAGCCAAGTCGGTGACCGTGGTCGCCACGCATGGCGTGCTCTC CGGCCCGGCCATCGAGCGACTCAAGAACTGCGGTGCGCGCGAGGTCGTGCTGACCGACACCGTGCCGATTCCCGAGGAAA AGCGCTGGGATGGCTTGACCGTCCTGTCGATCGCCCCGCTGCTGGCCAGCGCCATCCGCGCCGTATTCGAGGACGGCTCG GTCGCCGAACTGTTCGACACCTACCCCGAGCACCACGGTCAAGGCTTCCTGTTCGCCTGA
Upstream 100 bases:
>100_bases AGCGGCAGGTGAACGGCAGGCAACGCTGAGTTGTCCAACCGGTCGTGAAGAACGGCTATGCTGAAGACTGCATCAACGAG ACCACACGTTGGGAGACATG
Downstream 100 bases:
>100_bases TTACGTGCGTGTTTGTTCGCGGAAAGCACACAATGCGAGACGCGACATGGCGTAGTCTTTCGGTAAATACCGACAGTATG ATATAAATGAACACTTGTGG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSAILEGKPDKNLILVTGRIHPKLAEDVAEQLGIDVLETTAYDFANGEMYVRYTESVRGADVFVLQSHYKPINKAIMEQL IMIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCRLVFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLVAMPVL VDYIRDRFQDHLDNVAVVSPDAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVGDVAGKDCVLVDDLIDTAG TIAGACHVLQDAGAKSVTVVATHGVLSGPAIERLKNCGAREVVLTDTVPIPEEKRWDGLTVLSIAPLLASAIRAVFEDGS VAELFDTYPEHHGQGFLFA
Sequences:
>Translated_339_residues MSAILEGKPDKNLILVTGRIHPKLAEDVAEQLGIDVLETTAYDFANGEMYVRYTESVRGADVFVLQSHYKPINKAIMEQL IMIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCRLVFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLVAMPVL VDYIRDRFQDHLDNVAVVSPDAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVGDVAGKDCVLVDDLIDTAG TIAGACHVLQDAGAKSVTVVATHGVLSGPAIERLKNCGAREVVLTDTVPIPEEKRWDGLTVLSIAPLLASAIRAVFEDGS VAELFDTYPEHHGQGFLFA >Mature_338_residues SAILEGKPDKNLILVTGRIHPKLAEDVAEQLGIDVLETTAYDFANGEMYVRYTESVRGADVFVLQSHYKPINKAIMEQLI MIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCRLVFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLVAMPVLV DYIRDRFQDHLDNVAVVSPDAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVGDVAGKDCVLVDDLIDTAGT IAGACHVLQDAGAKSVTVVATHGVLSGPAIERLKNCGAREVVLTDTVPIPEEKRWDGLTVLSIAPLLASAIRAVFEDGSV AELFDTYPEHHGQGFLFA
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=319, Percent_Identity=42.6332288401254, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI4506127, Length=319, Percent_Identity=42.3197492163009, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI84875539, Length=322, Percent_Identity=42.2360248447205, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI28557709, Length=319, Percent_Identity=41.692789968652, Blast_Score=230, Evalue=1e-60, Organism=Homo sapiens, GI194018537, Length=333, Percent_Identity=36.036036036036, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI4506133, Length=332, Percent_Identity=33.1325301204819, Blast_Score=160, Evalue=2e-39, Organism=Escherichia coli, GI1787458, Length=317, Percent_Identity=41.9558359621451, Blast_Score=246, Evalue=2e-66, Organism=Caenorhabditis elegans, GI25149168, Length=319, Percent_Identity=41.692789968652, Blast_Score=230, Evalue=7e-61, Organism=Caenorhabditis elegans, GI17554702, Length=319, Percent_Identity=41.692789968652, Blast_Score=230, Evalue=8e-61, Organism=Caenorhabditis elegans, GI71989924, Length=319, Percent_Identity=41.692789968652, Blast_Score=229, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17554704, Length=316, Percent_Identity=41.7721518987342, Blast_Score=228, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17570245, Length=339, Percent_Identity=35.693215339233, Blast_Score=190, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320946, Length=317, Percent_Identity=41.9558359621451, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6319403, Length=321, Percent_Identity=42.6791277258567, Blast_Score=240, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6321776, Length=323, Percent_Identity=42.1052631578947, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6322667, Length=174, Percent_Identity=44.8275862068966, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324511, Length=110, Percent_Identity=35.4545454545455, Blast_Score=76, Evalue=9e-15, Organism=Drosophila melanogaster, GI21355239, Length=319, Percent_Identity=42.0062695924765, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI45551540, Length=342, Percent_Identity=39.4736842105263, Blast_Score=224, Evalue=6e-59, Organism=Drosophila melanogaster, GI24651458, Length=363, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI24651456, Length=363, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI281362873, Length=363, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI24651454, Length=363, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI24651462, Length=200, Percent_Identity=38.5, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI24651464, Length=200, Percent_Identity=38.5, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI45552010, Length=200, Percent_Identity=38.5, Blast_Score=135, Evalue=3e-32,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 36837; Mature: 36705
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILEGKPDKNLILVTGRIHPKLAEDVAEQLGIDVLETTAYDFANGEMYVRYTESVRGA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCCC DVFVLQSHYKPINKAIMEQLIMIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCRL EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHH VFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLVAMPVLVDYIRDRFQDHLDNVAVVSP HHHHHHHCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC DAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVGDVAGKDCVLVDDLIDTAG CCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHH TIAGACHVLQDAGAKSVTVVATHGVLSGPAIERLKNCGAREVVLTDTVPIPEEKRWDGLT HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCH VLSIAPLLASAIRAVFEDGSVAELFDTYPEHHGQGFLFA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCC >Mature Secondary Structure SAILEGKPDKNLILVTGRIHPKLAEDVAEQLGIDVLETTAYDFANGEMYVRYTESVRGA CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCCC DVFVLQSHYKPINKAIMEQLIMIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCRL EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHH VFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLVAMPVLVDYIRDRFQDHLDNVAVVSP HHHHHHHCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC DAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVGDVAGKDCVLVDDLIDTAG CCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHH TIAGACHVLQDAGAKSVTVVATHGVLSGPAIERLKNCGAREVVLTDTVPIPEEKRWDGLT HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCH VLSIAPLLASAIRAVFEDGSVAELFDTYPEHHGQGFLFA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]