| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is nadE [H]
Identifier: 213692585
GI number: 213692585
Start: 1880244
End: 1881941
Strand: Reverse
Name: nadE [H]
Synonym: Blon_1717
Alternate gene names: 213692585
Gene position: 1881941-1880244 (Counterclockwise)
Preceding gene: 213692586
Following gene: 213692584
Centisome position: 66.44
GC content: 63.6
Gene sequence:
>1698_bases ATGACACAGCTTCGCTTCGCACTCGCCCAGATCGACACCTGCGTCGGCGCGCTTGACGTCAACGCCGCCAAGGTGCTCGA CTACTCCCGTAAAGCCGCCGCAGGAAACGCCCAGGTGGTAGTCTTCTCGGAAATGACCCTCACCGGATACCCCATCGAGG ATCTGGCCCTGCGCCGCACCTTCCGCCAAGCCGCATGGGACAAGGCCAACGAACTCGCCACCCAGCTCAACGACGACGGC CTCGGCGATCTGTTCGTGGTGGTCGGCACCGTGGGCACCGACCGCAAGACCTCCAAGCCGCGCAACCGACTGGTGGTCTT GCATCAGGGCGTGGTCTGGGCCGGCTACGACAAGCACTTCCTGCCCAACTACGGCGTGTTCGATGAATTCCGCATCTTCT CCGCCGGCGACCGCTCCGTGACCCTCGACGTGGACGGCGCCACCATTGGCGTGGCCATCTGCGAGGACATCTGGCAGGAC GGCGGCCCGGTGGCCGACCTGGCCACCAAGAACATCGACCTGCTGCTCACCATCAACGGATCGCCGTATGAGGAAGGCAA GACCAACACCCGTTTTGAGCTCGCCCAGCGTCGTGCCGCCGAGGTTAACGCCCCGGTCATCTACCTGAATCAGGTCGGCG GTCAAGACGACCTCGTCTTCGACGGTGGCAGTTTCGTGGTCGACGCCGACGGCACGCTTATCGAACGCAGCCCGATGTTC ATGGAAAACCTGACGTTCTGGGACTTCGATTCCGCCGCCGAACATCAGGCCAAGGCCGAGATCGTTCCGGAACTCGACCC GGACGAAGAGGTATACACCGCCTGCGTGCTCGGCCTCAAGGACTACATGGCCAAGAACCACTTCACCGGCGTGACGCTGG GCCTCTCAGGAGGTATCGACTCCGCACTGGTAGCCGCCATGGCGGCCGACGCATGCGGCGGCGAGAACGTCTGGGGTATC TCCATGCCCTCCATGTACTCCTCCGATGGTTCCAAAGACGACGCCGCTGACCTGGCCTCCAACATTGGCGCCCATTACGA GGTTCAGCCCATTGAGCCATTGTTCAACGCCTACCAACAGCAACTTGATCTCCATGGTGTCTCCGCCGAGAACCTGCAGG CCCGCATCCGCGGTGTGATCGTGATGGCCAGTTCCAATTCGCGCGGTCTGCTCGCCGTGGCCACCGGCAACAAGTCAGAG CTCGCCTGCGGCTACTCGACCATCTACGGCGATGCGGTAGGCGGTTACGCACCCATCAAGGACCTGCTCAAGACCCGCGT CTGGGAGATCAGCCGTTGGCGTAACAAGGCCGCGGCCGCGGGCGTCGGCATCGGTGGGCTCAAGATCGTGGGCAACGAGG ACGGCAACACCGGCGTCCCGCTCAAGGACGGCGTGATGATTCCGGTCTCATCCATCGAGAAGGCTCCCTCGGCCGAGTTG CGCCCCGGGCAGAAGGACTCCGACTCCCTGCCCGAATACGCGCTGCTCGACAAGGTGCTCGCCGCATACATCGAGCACGC GCACGGCCGTGCCGACCTGTTAGCCGACGGCTTTGACCAGGCCACCGTAGACACCGTGATGCGATTGGTGGACCGCGCTG AATGGAAGCGCCGCCAATACCCGCTGGGTCCCAAGGTCACGGCCCTCGCGTTCGGACGTGACCGCCGACTGCCCGTCACC AACGCATTCAGGGAATAA
Upstream 100 bases:
>100_bases CGCATTGCAGTGACCTAATGAACGCAAAAACGACCTAATGAATGACGCCAAGCCGGAAGAACAGGCAATCCGACGCCATA CGCGGCTACACTAAGAAGCT
Downstream 100 bases:
>100_bases ACATATATTGCTCCCGCCAGCGGGAGCAAGTAATACCGTTGAGGAGGTACCAATGACAGACGATAACAAGAAGCAGTGGT ATTTCAACACCGTCAAGAAG
Product: NAD+ synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MTQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRTFRQAAWDKANELATQLNDDG LGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHFLPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQD GGPVADLATKNIDLLLTINGSPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF MENLTFWDFDSAAEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVTLGLSGGIDSALVAAMAADACGGENVWGI SMPSMYSSDGSKDDAADLASNIGAHYEVQPIEPLFNAYQQQLDLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSE LACGYSTIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGVPLKDGVMIPVSSIEKAPSAEL RPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVT NAFRE
Sequences:
>Translated_565_residues MTQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRTFRQAAWDKANELATQLNDDG LGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHFLPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQD GGPVADLATKNIDLLLTINGSPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF MENLTFWDFDSAAEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVTLGLSGGIDSALVAAMAADACGGENVWGI SMPSMYSSDGSKDDAADLASNIGAHYEVQPIEPLFNAYQQQLDLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSE LACGYSTIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGVPLKDGVMIPVSSIEKAPSAEL RPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVT NAFRE >Mature_564_residues TQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRTFRQAAWDKANELATQLNDDGL GDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHFLPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDG GPVADLATKNIDLLLTINGSPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMFM ENLTFWDFDSAAEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVTLGLSGGIDSALVAAMAADACGGENVWGIS MPSMYSSDGSKDDAADLASNIGAHYEVQPIEPLFNAYQQQLDLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSEL ACGYSTIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGVPLKDGVMIPVSSIEKAPSAELR PGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTN AFRE
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 60961; Mature: 60830
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRT CCHHHHHHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHH FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCEEEECCCCCC LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING CCCCCCCCCEEEEECCCCEEEEEECCCEEHHHHHHHHHHCCCCEEHHCCCCEEEEEEECC SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEECCCCEEECCCCH MENLTFWDFDSAAEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVTLGLSGGID HHCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH SALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIEPLFNAYQQ HHHHHHHHHHCCCCCCEEEECCCCHHCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHH QLDLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYSTIYGDAVGGYAPIK HHHHCCCCHHHHHEEEEEEEEEECCCCCCEEEEECCCCCCEEECHHHHCCCCCCCHHHHH DLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGVPLKDGVMIPVSSIEKAPSAEL HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHCCCCCCCC RPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTVMRLVDRAEWKRRQY CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PLGPKVTALAFGRDRRLPVTNAFRE CCCCCEEEEEECCCCCCCCHHHCCC >Mature Secondary Structure TQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRT CHHHHHHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHH FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCEEEECCCCCC LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING CCCCCCCCCEEEEECCCCEEEEEECCCEEHHHHHHHHHHCCCCEEHHCCCCEEEEEEECC SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEECCCCEEECCCCH MENLTFWDFDSAAEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVTLGLSGGID HHCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH SALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIEPLFNAYQQ HHHHHHHHHHCCCCCCEEEECCCCHHCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHH QLDLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYSTIYGDAVGGYAPIK HHHHCCCCHHHHHEEEEEEEEEECCCCCCEEEEECCCCCCEEECHHHHCCCCCCCHHHHH DLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGVPLKDGVMIPVSSIEKAPSAEL HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHCCCCCCCC RPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTVMRLVDRAEWKRRQY CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PLGPKVTALAFGRDRRLPVTNAFRE CCCCCEEEEEECCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]