| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is act [H]
Identifier: 213692582
GI number: 213692582
Start: 1876323
End: 1877204
Strand: Reverse
Name: act [H]
Synonym: Blon_1714
Alternate gene names: 213692582
Gene position: 1877204-1876323 (Counterclockwise)
Preceding gene: 213692583
Following gene: 213692581
Centisome position: 66.27
GC content: 61.79
Gene sequence:
>882_bases ATGCCCGCAACACCCACGTTCCGCACCACGACCAGGCATATGCTCAAGGAATCGAAGACCTATGCCTCGCAGACTTTGAT GGGCGGCCTTTCCGGCTTTGAATCCCCAATCGGACTCGACCGACGTGACCGCCTTTCCGCCCTGAAATCCGGCGATATCG GCTTCGTCCACTCTTGGGACATCAACACCTCCGTGGATGGACCGGGCACCCGCATGACCGTATTCATGTCCGGCTGCCCG CTGCGCTGCCAGTACTGCCAGAACCCGGACACTTGGAAGATGCGCGACGGCAAGCCCGTCTACCTTGACGCCATGATCAA GAAGGTCGATCGTTACAAGGACCTGTTCAAGGCCACGCATGGCGGTATCACCTTCTCCGGCGGCGAATCCATGATGCAGC CCGCCTTCGTCTCGCGCGTGTTCCACGCCGCCCGGGAGATGGGCGTGCACACCTGCCTCGATACGTCCGGCTTCCTCAAC ACGAGCTACACCGACGAGATGCTCGAGGACATCGACCTATGCCTGCTCGACGTCAAATCCGGTGACGAACGGACCTATCA CGAGGTCACCGGCGGCACCCTGCAGCCCACCATCGACTTCGGGCAGCGGTTGGCCAAGGCCGGCAAGAAGATCTGGGTGC GTTTCGTGCTGGTCCCGGGGTTGACCGACTCCGAGGAGAACGTCGAAAACGTGGCGCGGATCTGCGAGACCTTCGGCGAC GCCATCGAACACGTCGACGTGCTGGGATTCCACCAGCTGGGCCGGCCGAAGTGGCACGAACTGCGCATCCCATACCCGCT GGAGAACCAGAAGGGACCCAACGCCGCCACTCGCGAACGGGTGGCCAACCAGTTCAAGGACCACGGCTTCACCGTGTTTT AA
Upstream 100 bases:
>100_bases CCGCGAACCGCGGCAATGACTAACTGAAGGGGTGGGGCACGGCTCCACCCCTTCCTTATTTTCCACAGACTTTCGCATCA TTTGGAACAGGAGGACAACT
Downstream 100 bases:
>100_bases ATTGCAGGGCCGAACCGCGCGTAAATACCACGATTCGGCCCGTTCGCCCATACCCTAGAGATATGGCCGACATCTACGCA TTTCCTATGGGAGCGTCCAA
Product: pyruvate formate-lyase activating enzyme
Products: NA
Alternate protein names: PFL-activating enzyme; Formate-C-acetyltransferase-activating enzyme [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPATPTFRTTTRHMLKESKTYASQTLMGGLSGFESPIGLDRRDRLSALKSGDIGFVHSWDINTSVDGPGTRMTVFMSGCP LRCQYCQNPDTWKMRDGKPVYLDAMIKKVDRYKDLFKATHGGITFSGGESMMQPAFVSRVFHAAREMGVHTCLDTSGFLN TSYTDEMLEDIDLCLLDVKSGDERTYHEVTGGTLQPTIDFGQRLAKAGKKIWVRFVLVPGLTDSEENVENVARICETFGD AIEHVDVLGFHQLGRPKWHELRIPYPLENQKGPNAATRERVANQFKDHGFTVF
Sequences:
>Translated_293_residues MPATPTFRTTTRHMLKESKTYASQTLMGGLSGFESPIGLDRRDRLSALKSGDIGFVHSWDINTSVDGPGTRMTVFMSGCP LRCQYCQNPDTWKMRDGKPVYLDAMIKKVDRYKDLFKATHGGITFSGGESMMQPAFVSRVFHAAREMGVHTCLDTSGFLN TSYTDEMLEDIDLCLLDVKSGDERTYHEVTGGTLQPTIDFGQRLAKAGKKIWVRFVLVPGLTDSEENVENVARICETFGD AIEHVDVLGFHQLGRPKWHELRIPYPLENQKGPNAATRERVANQFKDHGFTVF >Mature_292_residues PATPTFRTTTRHMLKESKTYASQTLMGGLSGFESPIGLDRRDRLSALKSGDIGFVHSWDINTSVDGPGTRMTVFMSGCPL RCQYCQNPDTWKMRDGKPVYLDAMIKKVDRYKDLFKATHGGITFSGGESMMQPAFVSRVFHAAREMGVHTCLDTSGFLNT SYTDEMLEDIDLCLLDVKSGDERTYHEVTGGTLQPTIDFGQRLAKAGKKIWVRFVLVPGLTDSEENVENVARICETFGDA IEHVDVLGFHQLGRPKWHELRIPYPLENQKGPNAATRERVANQFKDHGFTVF
Specific function: Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine [H]
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the organic radical-activating enzymes family [H]
Homologues:
Organism=Escherichia coli, GI1787130, Length=243, Percent_Identity=36.6255144032922, Blast_Score=184, Evalue=4e-48, Organism=Escherichia coli, GI1790389, Length=251, Percent_Identity=26.6932270916335, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI226510931, Length=166, Percent_Identity=31.3253012048193, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012838 - InterPro: IPR001989 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: =1.97.1.4 [H]
Molecular weight: Translated: 32879; Mature: 32748
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS01087 RADICAL_ACTIVATING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATPTFRTTTRHMLKESKTYASQTLMGGLSGFESPIGLDRRDRLSALKSGDIGFVHSWD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC INTSVDGPGTRMTVFMSGCPLRCQYCQNPDTWKMRDGKPVYLDAMIKKVDRYKDLFKATH CCCCCCCCCCEEEEEECCCCCEEHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHC GGITFSGGESMMQPAFVSRVFHAAREMGVHTCLDTSGFLNTSYTDEMLEDIDLCLLDVKS CCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCC GDERTYHEVTGGTLQPTIDFGQRLAKAGKKIWVRFVLVPGLTDSEENVENVARICETFGD CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHH AIEHVDVLGFHQLGRPKWHELRIPYPLENQKGPNAATRERVANQFKDHGFTVF HHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PATPTFRTTTRHMLKESKTYASQTLMGGLSGFESPIGLDRRDRLSALKSGDIGFVHSWD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC INTSVDGPGTRMTVFMSGCPLRCQYCQNPDTWKMRDGKPVYLDAMIKKVDRYKDLFKATH CCCCCCCCCCEEEEEECCCCCEEHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHC GGITFSGGESMMQPAFVSRVFHAAREMGVHTCLDTSGFLNTSYTDEMLEDIDLCLLDVKS CCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCC GDERTYHEVTGGTLQPTIDFGQRLAKAGKKIWVRFVLVPGLTDSEENVENVARICETFGD CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHH AIEHVDVLGFHQLGRPKWHELRIPYPLENQKGPNAATRERVANQFKDHGFTVF HHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8636053 [H]