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The map label for this gene is yifB [C]

Identifier: 213692567

GI number: 213692567

Start: 1857746

End: 1859281

Strand: Direct

Name: yifB [C]

Synonym: Blon_1699

Alternate gene names: 213692567

Gene position: 1857746-1859281 (Clockwise)

Preceding gene: 213692566

Following gene: 213692568

Centisome position: 65.58

GC content: 59.64

Gene sequence:

>1536_bases
ATGGCTATCGGCAGCACTCTCTCAGTCGGACTGATCGGCCTTAAGGCCTTCATCGTCCAAGTGCAGGCTTTCATCAGCCC
TGGCTTGCCATACTTCAGCATCATCGGATTGCCGGATGCATCGTTGTCCGAAGCCCGCGAGCGCGTGAAATCGGCGTGTC
AAGCCACTGGATTCGGTTGGCCGCAAACCCGCGTGACCGTGAACATGAGCCCTGCGGCCATGCCCAAACGTGGTTCGTCG
CATGATCTGGCCATCGCGGCCAGCGTCCTATGCGCGGCGGGTTCCATAGGGCATGATTGCTTGGAAGATACCATTGTGCT
CGGCGAAGTGAATCTTGACGGCTCGGTGCTGCCGATTCATGGGCTGCTCCCGATCATGCTGCATGCCGAGGAACGTGGCG
TGCGCAAAATGATTGTTCCCCATCGCAATCTTGACGAGGCTTCGATGGTGGATGGACTGGATGTAGTGGGCGTGAGGCAT
GTGGGTGAGCTCATCGAACTGATGGGCGGCGATGCCACCTATACGATTACTGATACACCGGTTGCCGACGAGACCACCAT
GGATCAATCGCCCACAAGCCATCCCAACGATTGTGGCGATATGAACGAGGTTCTGGGGCAGGAACATGCCAAATGGGCGC
TGCAAGTGGCGGCGGCAGGCGGACATAATCTCATCATGACCGGCCCGCCAGGCAGCGGCAAAACCATGCTGGCCTCACGT
ATGCCCGGCATCATGTGCCCGTTGAACGAGGCGGAACAACTGGAGGTGGCATCGATTCGGTCGCTGTGCGGCATACTGCC
TCAGTACGGCATCACCGACATGCCGCCGTTCGAGGCACCGCACCACACCGCCAGCACGGCGGCCTTGGTGGGTGGTGGCA
GCGGCATCGCCGTTCCCGGCGCGATCACGCGCGCGCATCGAGGCATTCTGTTCCTGGACGAGGCACCGGAATTCAGCGCA
CGCGCCCTGCAGACGTTGCGCGAACCATTGGAATCCGGGTATGTGGCGCTTTCCCGTTCAAAAGGCAGCACCTATTACCC
GGCCTCATTCCAACTCATCATGGCGGCCAACCCCTGCCCGTGCGGATACTATTACGGCACCGGCGAACGTTGCGCTTGCC
GGGAAAAAGACCGTATACGTTATTTCTCGCGATTGTCCGGACCGATATTGGATCGTGTGGATATTCAGATGGCGGTGCCA
CCGGTCTCGCGCATTGCCGTGCAAAGCGAGCCAATCGGCGAGTCCAGTGCCGGAATACAAGCTCGTGTGATTCGCGCCCG
TCAAGTGGCCAAAGACCGGTTCAGACAGTATGGATGGGTGTGCAACGCGCAAGCTTCGGGCAAATGGCTGCACGCCAATA
CGTCGCTGAAAGCGATGGAATTGGTCAATCGGGCCCTGTCCAATCATCAACTCACATTGCGCGGGGCCGATCGCGCCATG
CGTCTGTCTTGGACGCTCGCCGATCTGGCCGGCCGCGTATCCCCCACCGAGCAGGACGTCCATCAGGGCATCGAAATGAG
AACGAGGATGACATGA

Upstream 100 bases:

>100_bases
TCGGGTGGGCAGACCGCTCGTGCATCACATCGAAAACGCCTTCTGAATTCGTCCCCAAAAAAACAGCCACGTTGCGAAAC
ACATTGCGAAAGGAGTAGAC

Downstream 100 bases:

>100_bases
GTAACGCTACTGATATCCGACAATCTGGCGGCACCGCAGGCAGTGTGGATCACACCGATACGGGCCTCGCTGTTTCGCGC
ACCATTCCCATGCCTCCCAC

Product: Mg chelatase, subunit ChlI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MAIGSTLSVGLIGLKAFIVQVQAFISPGLPYFSIIGLPDASLSEARERVKSACQATGFGWPQTRVTVNMSPAAMPKRGSS
HDLAIAASVLCAAGSIGHDCLEDTIVLGEVNLDGSVLPIHGLLPIMLHAEERGVRKMIVPHRNLDEASMVDGLDVVGVRH
VGELIELMGGDATYTITDTPVADETTMDQSPTSHPNDCGDMNEVLGQEHAKWALQVAAAGGHNLIMTGPPGSGKTMLASR
MPGIMCPLNEAEQLEVASIRSLCGILPQYGITDMPPFEAPHHTASTAALVGGGSGIAVPGAITRAHRGILFLDEAPEFSA
RALQTLREPLESGYVALSRSKGSTYYPASFQLIMAANPCPCGYYYGTGERCACREKDRIRYFSRLSGPILDRVDIQMAVP
PVSRIAVQSEPIGESSAGIQARVIRARQVAKDRFRQYGWVCNAQASGKWLHANTSLKAMELVNRALSNHQLTLRGADRAM
RLSWTLADLAGRVSPTEQDVHQGIEMRTRMT

Sequences:

>Translated_511_residues
MAIGSTLSVGLIGLKAFIVQVQAFISPGLPYFSIIGLPDASLSEARERVKSACQATGFGWPQTRVTVNMSPAAMPKRGSS
HDLAIAASVLCAAGSIGHDCLEDTIVLGEVNLDGSVLPIHGLLPIMLHAEERGVRKMIVPHRNLDEASMVDGLDVVGVRH
VGELIELMGGDATYTITDTPVADETTMDQSPTSHPNDCGDMNEVLGQEHAKWALQVAAAGGHNLIMTGPPGSGKTMLASR
MPGIMCPLNEAEQLEVASIRSLCGILPQYGITDMPPFEAPHHTASTAALVGGGSGIAVPGAITRAHRGILFLDEAPEFSA
RALQTLREPLESGYVALSRSKGSTYYPASFQLIMAANPCPCGYYYGTGERCACREKDRIRYFSRLSGPILDRVDIQMAVP
PVSRIAVQSEPIGESSAGIQARVIRARQVAKDRFRQYGWVCNAQASGKWLHANTSLKAMELVNRALSNHQLTLRGADRAM
RLSWTLADLAGRVSPTEQDVHQGIEMRTRMT
>Mature_510_residues
AIGSTLSVGLIGLKAFIVQVQAFISPGLPYFSIIGLPDASLSEARERVKSACQATGFGWPQTRVTVNMSPAAMPKRGSSH
DLAIAASVLCAAGSIGHDCLEDTIVLGEVNLDGSVLPIHGLLPIMLHAEERGVRKMIVPHRNLDEASMVDGLDVVGVRHV
GELIELMGGDATYTITDTPVADETTMDQSPTSHPNDCGDMNEVLGQEHAKWALQVAAAGGHNLIMTGPPGSGKTMLASRM
PGIMCPLNEAEQLEVASIRSLCGILPQYGITDMPPFEAPHHTASTAALVGGGSGIAVPGAITRAHRGILFLDEAPEFSAR
ALQTLREPLESGYVALSRSKGSTYYPASFQLIMAANPCPCGYYYGTGERCACREKDRIRYFSRLSGPILDRVDIQMAVPP
VSRIAVQSEPIGESSAGIQARVIRARQVAKDRFRQYGWVCNAQASGKWLHANTSLKAMELVNRALSNHQLTLRGADRAMR
LSWTLADLAGRVSPTEQDVHQGIEMRTRMT

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=498, Percent_Identity=36.144578313253, Blast_Score=301, Evalue=6e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 54757; Mature: 54625

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGSTLSVGLIGLKAFIVQVQAFISPGLPYFSIIGLPDASLSEARERVKSACQATGFGW
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PQTRVTVNMSPAAMPKRGSSHDLAIAASVLCAAGSIGHDCLEDTIVLGEVNLDGSVLPIH
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCEEEEEEECCCCCEEEHH
GLLPIMLHAEERGVRKMIVPHRNLDEASMVDGLDVVGVRHVGELIELMGGDATYTITDTP
CCEEEEEECCCCCCCEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
VADETTMDQSPTSHPNDCGDMNEVLGQEHAKWALQVAAAGGHNLIMTGPPGSGKTMLASR
CCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHEEEEEEECCCCEEEEECCCCCCCEEHHHC
MPGIMCPLNEAEQLEVASIRSLCGILPQYGITDMPPFEAPHHTASTAALVGGGSGIAVPG
CCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCC
AITRAHRGILFLDEAPEFSARALQTLREPLESGYVALSRSKGSTYYPASFQLIMAANPCP
HHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCEEEEEECCCCC
CGYYYGTGERCACREKDRIRYFSRLSGPILDRVDIQMAVPPVSRIAVQSEPIGESSAGIQ
CCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHEECCCCCCCCCCCHH
ARVIRARQVAKDRFRQYGWVCNAQASGKWLHANTSLKAMELVNRALSNHQLTLRGADRAM
HHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEECCCEE
RLSWTLADLAGRVSPTEQDVHQGIEMRTRMT
EEEEEHHHHHCCCCCCHHHHHCCHHHHHCCC
>Mature Secondary Structure 
AIGSTLSVGLIGLKAFIVQVQAFISPGLPYFSIIGLPDASLSEARERVKSACQATGFGW
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PQTRVTVNMSPAAMPKRGSSHDLAIAASVLCAAGSIGHDCLEDTIVLGEVNLDGSVLPIH
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCEEEEEEECCCCCEEEHH
GLLPIMLHAEERGVRKMIVPHRNLDEASMVDGLDVVGVRHVGELIELMGGDATYTITDTP
CCEEEEEECCCCCCCEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
VADETTMDQSPTSHPNDCGDMNEVLGQEHAKWALQVAAAGGHNLIMTGPPGSGKTMLASR
CCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHEEEEEEECCCCEEEEECCCCCCCEEHHHC
MPGIMCPLNEAEQLEVASIRSLCGILPQYGITDMPPFEAPHHTASTAALVGGGSGIAVPG
CCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCC
AITRAHRGILFLDEAPEFSARALQTLREPLESGYVALSRSKGSTYYPASFQLIMAANPCP
HHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCEEEEEECCCCC
CGYYYGTGERCACREKDRIRYFSRLSGPILDRVDIQMAVPPVSRIAVQSEPIGESSAGIQ
CCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHEECCCCCCCCCCCHH
ARVIRARQVAKDRFRQYGWVCNAQASGKWLHANTSLKAMELVNRALSNHQLTLRGADRAM
HHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEECCCEE
RLSWTLADLAGRVSPTEQDVHQGIEMRTRMT
EEEEEHHHHHCCCCCCHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]