| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is macB [H]
Identifier: 213692562
GI number: 213692562
Start: 1850010
End: 1852865
Strand: Reverse
Name: macB [H]
Synonym: Blon_1694
Alternate gene names: 213692562
Gene position: 1852865-1850010 (Counterclockwise)
Preceding gene: 213692563
Following gene: 213692559
Centisome position: 65.41
GC content: 62.99
Gene sequence:
>2856_bases ATGTTTTCCATCACTCTGAAACTTATGAAGAAAAGCGCCAGGATGCTAATTCCGGCAGGCATCGCCATCCTGATCGGCGC TGCGTTCATCGCCGCTACCTTCCTATTCGGCAACGCGATGAACGATGCGCTTGCCGCCCAGAACACCGCCCAGCTCGGCG GCGCGAACTACGTGATCAGCCCGGATAGCGGCAAGGACCTGACCGATAAGGACCAGGACTACATCTACACGCGCACGGTT AACGACTTCCAGCTTGACCGCATCCGCGCCACCAAAGGCGTCAAGGACGCACGTGCCGGCTACGCGGGTCCTGTGACCGT AACCCGTGGCAACAAGCATGCCAACAGCTACGTCATCACCACCGCCACAAAACGCACGCTGCTGCCGGTCACCATCACGC AAGGAGACCAGCCGGCGGACAGCAACGAGATCGCCCTGACCAAGTCCGTGGCCGACCAGCTCGGCGTCAAGGTAGGGGAC CGTGTGACCGTCAACTCGCAGGCGGCGCAGTATGCGGGCAAGACCGGCGATTCGGCCGGTAATACCGGTGACGCTGGTGA TGAGTCGGCCCAGAACGCCGATGGCGCGAGCTCGCACGACGGTGATTCCGATGCCGCGTCCGGCGCGTCCGCCCCATCCG ACGGCACCGACACGGCCGCCGACTCCGGCATGACCGTGCGCGTGGTCGGCCTGACCGACGATCCGAACGGTGCCTACCCC TACTACGGCGGCGCCTCCGTGCTCTCCGACAACGTGATCGCCGCGATGGGAGGCGGCGACGATTTCAACGAACTGCCCGC CAGCATGATCTACCTCGACATCGATGGTGCGGGCGATGCGGCCGCGACGGCCGCGGTCGCACAGATCAACGCCCTGCTCC CCAAGCATTTCAGCGTCCAGTCCCGAGCCTCATACGCCGAACGATCCATCGCGAGCATGAGCGCGGGCGAAACCAGCATC ACCACCATATTCCTGTTGAGTTTCGGCATACTCGCCATGCTGGTGGCCTCGCTGGTCATCGCCAACACCTTCCGCGTCCT CGTGGCGCAACGCCGCCGCACGCTCGCGCTGCTGCGTACCATCGGCGCGAACAAGAAACAGTTGTATGCCGGTGTGCTGT TCGAAGCCGGCGTGCTGGGACTGATCGCCTCCGTGCTGGGCGTGGGCCTCGGCATCGCCCTTATGGAAGCGCTGTGCCGG TCCGGCATCATGCAGGCCACCGACATGAACATGCGACTGGTGCTGTCCCGCCCGGCGTTCACCGTACCGGTGGCATTCGG CATCATTATGACGGTGATTGCCTCGCTAGGCTCCGCGCGTTCCGCTACCGCCGTCACCCCGCTGGAAGCGTTGCGACCCA TCGAACTGACCGACACGCGACGGGCCGGTGTGGTCCGCGCCGTGATTTCCATGCTGCTGATTGCGGCCGGCGTGGCACTG TGCGCATTCTCTGTATGGCAGATGTCCGAGAAAATCGCCGGACGTGATTCAATGGCCGACAAGCAGTATCCGCTGGTGCT GCTCGCCGCCATCATCGGATGTGCATTGATCTTCCTTGGACTGGTGCTTTCCGCCACGTTCTGGCTGCCGGTGCTCATGC GCGGCGTGGGCGCGCTGGTTGCACTGGCCGGTCCGTCCGCCAAAGTGGCACATGCGAACATTCAGAAGAACCCGCGCCGC GTGGCCGCCACCGGTGCCGCACTGCTTATCGGCGTGACGCTGGTCTCCACCATCGCCACCGGTGCCGCCAGTGCCAAGCA AACCATGAACGAGGCGCTGACCACGCGCTACAGCGTCGACATGATTGCCGCTGGCACCGATATGACTGGCAAACAGGCCA GCGAGGCAGCCAAAGTCAAGGGCGTTCAGAGCAGTATCTACGCGCCGACCCGCATGATGACCATGAAGGATGCCGACGGC AAGAGTCTGAGTGTGCTGGTCGTGGGCGTGGATGGCGTCGACGCGCTGCGCAAGGTGGTGCGCTCCGATTTGTCCGGTGT GACCATTGATGGCGATTCCGTACTGATGCCCAAGTATTCCGCCGCTACAGGCAAGGATATTCCGCTGGACAAGAGCGTTA CGTTCACGGCTGGAGCGGCCGAAGCACAAGCCGATGCCACCAATGGTCCGTCCGGTAATGATGCGAACGGCAGCGCCGAA AACGGCAATGGACAATCCGGCGGCACACAGACGCTGACGCTCAAACCGCGGAAGGTGGACTATCGCCGCATTGCCTCCAA CTACGCCGCGGTCGCCTTCGTGGCCGCCAGCCACTTCACCAACGGTGGAATCAAGGCCGACGGGCATATCATGCTTATGC GTATTGACGCCGAAGGCGCGGGTGTTGCGCTGAACGACGTATTCACCAACGTGCAGAATGTGTTCTCCGCTAGTGCTGGT GTTACCGTGACCGGTCCGGTGGCCGAACGTACGCAATGGGAGACCATGATCAACGGCATGATGGCATTGTTGGTCGGTTT GATTGCGGTGGCTGTGCTCATCGCCTTGGTCGGCGTAGCGAACACGCTGAGTCTGTCGGTGATCGAACGCACACGCGAAT CCGCCACCTTGCGTGCCATCGGCATGACGCGCGGCCAACTGCGGCGCTCGCTGGCGGTGGAAGCGTTGCTGCTTTCGCTC GTCTCCGGCGTGGTGGGAGTGGTATTGGGTACCCTGTTCGGCTGGCTCGGATCCTACATGGTGTTTAGTTTGTATGGCGA CACCGTGTTCCCGTTCGAATGGGCCACCAACGGTGTGGTGCTCGGCGTCGCCGCGCTCGCCGCTCTCCTCGCCAGCGTGG CACCCGCCCGCCGAGCCGTCAAAACGCCACCAGTTGAAGCCTTGGCCGAAGCGTAG
Upstream 100 bases:
>100_bases GCTCCATTGCCCCCAGCTGGGAGAACCGGCACCATGCGCCATGCCCGCGCCGTCGTACAGCACGCTCGCTGAGCCGGAAA GCGAGAGACAGGACACCCCC
Downstream 100 bases:
>100_bases AGCAATAAGCTCCCTCATCAGAGGGAGCTTTTTTGTTACACCAGCCCGTTATCGTACGCGAAGACTACAGCCTGTACGCG GTCACGGGCGTTGATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 951; Mature: 951
Protein sequence:
>951_residues MFSITLKLMKKSARMLIPAGIAILIGAAFIAATFLFGNAMNDALAAQNTAQLGGANYVISPDSGKDLTDKDQDYIYTRTV NDFQLDRIRATKGVKDARAGYAGPVTVTRGNKHANSYVITTATKRTLLPVTITQGDQPADSNEIALTKSVADQLGVKVGD RVTVNSQAAQYAGKTGDSAGNTGDAGDESAQNADGASSHDGDSDAASGASAPSDGTDTAADSGMTVRVVGLTDDPNGAYP YYGGASVLSDNVIAAMGGGDDFNELPASMIYLDIDGAGDAAATAAVAQINALLPKHFSVQSRASYAERSIASMSAGETSI TTIFLLSFGILAMLVASLVIANTFRVLVAQRRRTLALLRTIGANKKQLYAGVLFEAGVLGLIASVLGVGLGIALMEALCR SGIMQATDMNMRLVLSRPAFTVPVAFGIIMTVIASLGSARSATAVTPLEALRPIELTDTRRAGVVRAVISMLLIAAGVAL CAFSVWQMSEKIAGRDSMADKQYPLVLLAAIIGCALIFLGLVLSATFWLPVLMRGVGALVALAGPSAKVAHANIQKNPRR VAATGAALLIGVTLVSTIATGAASAKQTMNEALTTRYSVDMIAAGTDMTGKQASEAAKVKGVQSSIYAPTRMMTMKDADG KSLSVLVVGVDGVDALRKVVRSDLSGVTIDGDSVLMPKYSAATGKDIPLDKSVTFTAGAAEAQADATNGPSGNDANGSAE NGNGQSGGTQTLTLKPRKVDYRRIASNYAAVAFVAASHFTNGGIKADGHIMLMRIDAEGAGVALNDVFTNVQNVFSASAG VTVTGPVAERTQWETMINGMMALLVGLIAVAVLIALVGVANTLSLSVIERTRESATLRAIGMTRGQLRRSLAVEALLLSL VSGVVGVVLGTLFGWLGSYMVFSLYGDTVFPFEWATNGVVLGVAALAALLASVAPARRAVKTPPVEALAEA
Sequences:
>Translated_951_residues MFSITLKLMKKSARMLIPAGIAILIGAAFIAATFLFGNAMNDALAAQNTAQLGGANYVISPDSGKDLTDKDQDYIYTRTV NDFQLDRIRATKGVKDARAGYAGPVTVTRGNKHANSYVITTATKRTLLPVTITQGDQPADSNEIALTKSVADQLGVKVGD RVTVNSQAAQYAGKTGDSAGNTGDAGDESAQNADGASSHDGDSDAASGASAPSDGTDTAADSGMTVRVVGLTDDPNGAYP YYGGASVLSDNVIAAMGGGDDFNELPASMIYLDIDGAGDAAATAAVAQINALLPKHFSVQSRASYAERSIASMSAGETSI TTIFLLSFGILAMLVASLVIANTFRVLVAQRRRTLALLRTIGANKKQLYAGVLFEAGVLGLIASVLGVGLGIALMEALCR SGIMQATDMNMRLVLSRPAFTVPVAFGIIMTVIASLGSARSATAVTPLEALRPIELTDTRRAGVVRAVISMLLIAAGVAL CAFSVWQMSEKIAGRDSMADKQYPLVLLAAIIGCALIFLGLVLSATFWLPVLMRGVGALVALAGPSAKVAHANIQKNPRR VAATGAALLIGVTLVSTIATGAASAKQTMNEALTTRYSVDMIAAGTDMTGKQASEAAKVKGVQSSIYAPTRMMTMKDADG KSLSVLVVGVDGVDALRKVVRSDLSGVTIDGDSVLMPKYSAATGKDIPLDKSVTFTAGAAEAQADATNGPSGNDANGSAE NGNGQSGGTQTLTLKPRKVDYRRIASNYAAVAFVAASHFTNGGIKADGHIMLMRIDAEGAGVALNDVFTNVQNVFSASAG VTVTGPVAERTQWETMINGMMALLVGLIAVAVLIALVGVANTLSLSVIERTRESATLRAIGMTRGQLRRSLAVEALLLSL VSGVVGVVLGTLFGWLGSYMVFSLYGDTVFPFEWATNGVVLGVAALAALLASVAPARRAVKTPPVEALAEA >Mature_951_residues MFSITLKLMKKSARMLIPAGIAILIGAAFIAATFLFGNAMNDALAAQNTAQLGGANYVISPDSGKDLTDKDQDYIYTRTV NDFQLDRIRATKGVKDARAGYAGPVTVTRGNKHANSYVITTATKRTLLPVTITQGDQPADSNEIALTKSVADQLGVKVGD RVTVNSQAAQYAGKTGDSAGNTGDAGDESAQNADGASSHDGDSDAASGASAPSDGTDTAADSGMTVRVVGLTDDPNGAYP YYGGASVLSDNVIAAMGGGDDFNELPASMIYLDIDGAGDAAATAAVAQINALLPKHFSVQSRASYAERSIASMSAGETSI TTIFLLSFGILAMLVASLVIANTFRVLVAQRRRTLALLRTIGANKKQLYAGVLFEAGVLGLIASVLGVGLGIALMEALCR SGIMQATDMNMRLVLSRPAFTVPVAFGIIMTVIASLGSARSATAVTPLEALRPIELTDTRRAGVVRAVISMLLIAAGVAL CAFSVWQMSEKIAGRDSMADKQYPLVLLAAIIGCALIFLGLVLSATFWLPVLMRGVGALVALAGPSAKVAHANIQKNPRR VAATGAALLIGVTLVSTIATGAASAKQTMNEALTTRYSVDMIAAGTDMTGKQASEAAKVKGVQSSIYAPTRMMTMKDADG KSLSVLVVGVDGVDALRKVVRSDLSGVTIDGDSVLMPKYSAATGKDIPLDKSVTFTAGAAEAQADATNGPSGNDANGSAE NGNGQSGGTQTLTLKPRKVDYRRIASNYAAVAFVAASHFTNGGIKADGHIMLMRIDAEGAGVALNDVFTNVQNVFSASAG VTVTGPVAERTQWETMINGMMALLVGLIAVAVLIALVGVANTLSLSVIERTRESATLRAIGMTRGQLRRSLAVEALLLSL VSGVVGVVLGTLFGWLGSYMVFSLYGDTVFPFEWATNGVVLGVAALAALLASVAPARRAVKTPPVEALAEA
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 97983; Mature: 97983
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSITLKLMKKSARMLIPAGIAILIGAAFIAATFLFGNAMNDALAAQNTAQLGGANYVIS CCEEEHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEC PDSGKDLTDKDQDYIYTRTVNDFQLDRIRATKGVKDARAGYAGPVTVTRGNKHANSYVIT CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHCCCCCCCEEEECCCCCCCCEEEE TATKRTLLPVTITQGDQPADSNEIALTKSVADQLGVKVGDRVTVNSQAAQYAGKTGDSAG EECCCEEEEEEEECCCCCCCCCCEEEHHHHHHHHCCCCCCEEEECCHHHHHCCCCCCCCC NTGDAGDESAQNADGASSHDGDSDAASGASAPSDGTDTAADSGMTVRVVGLTDDPNGAYP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC YYGGASVLSDNVIAAMGGGDDFNELPASMIYLDIDGAGDAAATAAVAQINALLPKHFSVQ CCCCHHHHCCCEEEEECCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHH SRASYAERSIASMSAGETSITTIFLLSFGILAMLVASLVIANTFRVLVAQRRRTLALLRT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGANKKQLYAGVLFEAGVLGLIASVLGVGLGIALMEALCRSGIMQATDMNMRLVLSRPAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCH TVPVAFGIIMTVIASLGSARSATAVTPLEALRPIELTDTRRAGVVRAVISMLLIAAGVAL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CAFSVWQMSEKIAGRDSMADKQYPLVLLAAIIGCALIFLGLVLSATFWLPVLMRGVGALV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ALAGPSAKVAHANIQKNPRRVAATGAALLIGVTLVSTIATGAASAKQTMNEALTTRYSVD EECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEE MIAAGTDMTGKQASEAAKVKGVQSSIYAPTRMMTMKDADGKSLSVLVVGVDGVDALRKVV EEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHH RSDLSGVTIDGDSVLMPKYSAATGKDIPLDKSVTFTAGAAEAQADATNGPSGNDANGSAE HHCCCCEEECCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC NGNGQSGGTQTLTLKPRKVDYRRIASNYAAVAFVAASHFTNGGIKADGHIMLMRIDAEGA CCCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHHHHHHCCCCCEEECCEEEEEEEECCCC GVALNDVFTNVQNVFSASAGVTVTGPVAERTQWETMINGMMALLVGLIAVAVLIALVGVA CEEHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTLSLSVIERTRESATLRAIGMTRGQLRRSLAVEALLLSLVSGVVGVVLGTLFGWLGSYM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSLYGDTVFPFEWATNGVVLGVAALAALLASVAPARRAVKTPPVEALAEA HHHHHCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure MFSITLKLMKKSARMLIPAGIAILIGAAFIAATFLFGNAMNDALAAQNTAQLGGANYVIS CCEEEHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEC PDSGKDLTDKDQDYIYTRTVNDFQLDRIRATKGVKDARAGYAGPVTVTRGNKHANSYVIT CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHCCCCCCCEEEECCCCCCCCEEEE TATKRTLLPVTITQGDQPADSNEIALTKSVADQLGVKVGDRVTVNSQAAQYAGKTGDSAG EECCCEEEEEEEECCCCCCCCCCEEEHHHHHHHHCCCCCCEEEECCHHHHHCCCCCCCCC NTGDAGDESAQNADGASSHDGDSDAASGASAPSDGTDTAADSGMTVRVVGLTDDPNGAYP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC YYGGASVLSDNVIAAMGGGDDFNELPASMIYLDIDGAGDAAATAAVAQINALLPKHFSVQ CCCCHHHHCCCEEEEECCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHH SRASYAERSIASMSAGETSITTIFLLSFGILAMLVASLVIANTFRVLVAQRRRTLALLRT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGANKKQLYAGVLFEAGVLGLIASVLGVGLGIALMEALCRSGIMQATDMNMRLVLSRPAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCH TVPVAFGIIMTVIASLGSARSATAVTPLEALRPIELTDTRRAGVVRAVISMLLIAAGVAL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CAFSVWQMSEKIAGRDSMADKQYPLVLLAAIIGCALIFLGLVLSATFWLPVLMRGVGALV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ALAGPSAKVAHANIQKNPRRVAATGAALLIGVTLVSTIATGAASAKQTMNEALTTRYSVD EECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEE MIAAGTDMTGKQASEAAKVKGVQSSIYAPTRMMTMKDADGKSLSVLVVGVDGVDALRKVV EEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHH RSDLSGVTIDGDSVLMPKYSAATGKDIPLDKSVTFTAGAAEAQADATNGPSGNDANGSAE HHCCCCEEECCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC NGNGQSGGTQTLTLKPRKVDYRRIASNYAAVAFVAASHFTNGGIKADGHIMLMRIDAEGA CCCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHHHHHHCCCCCEEECCEEEEEEEECCCC GVALNDVFTNVQNVFSASAGVTVTGPVAERTQWETMINGMMALLVGLIAVAVLIALVGVA CEEHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTLSLSVIERTRESATLRAIGMTRGQLRRSLAVEALLLSLVSGVVGVVLGTLFGWLGSYM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSLYGDTVFPFEWATNGVVLGVAALAALLASVAPARRAVKTPPVEALAEA HHHHHCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA