Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692551

Identifier: 213692551

GI number: 213692551

Start: 1835475

End: 1836740

Strand: Direct

Name: 213692551

Synonym: Blon_1683

Alternate gene names: NA

Gene position: 1835475-1836740 (Clockwise)

Preceding gene: 213692550

Following gene: 213692552

Centisome position: 64.79

GC content: 57.27

Gene sequence:

>1266_bases
ATGGATATGAAGTATAGAAGTTTGGCAAGGCTGTTCCATGCCGACAGGTCAGTCGATTCCTTCAATAACCATGCGGCACT
CGCACGGCAGCGGCTTGAGGCAGATTCCACATTCAGGACCGGGGTCATCACGCCATTGGGCGAGCTGTTCTCCGCCACGC
CACGCGAGACGACCCTGCTCATGGAAAATATACTTCTCGCCGAAAGGCGCATATCACGGCTATGGAACCTGATTCCCGGC
GTCATGCGCTGGGACTACATACGGCATTCCATCAGTGAGGAACTGTTCGCCACCAACGAGATGGAAGGCGTGCGCAGCAC
CCGCAAGGAAACCCAGGACGCCGTGGACGCGGCCGACAAGGCAAGGAGGGACGGCGACGACTCCAAGGCGCGGTTCAGCG
AATTTGCCAAGCTGTACCTGAACCTCACGGACAAGGACTCCGCGTTGCCGGCGGGCATCGCCGACATCCGCGACATCTAT
GACCAGGTCGTGCTCGACGAAATCGATGAGAGCGATCAGCCGGACGGCGACCTGTTCCGGAAAGGCGATGTGGAAATACA
GGGGCCGCACGGCCTCGCGATCCATAACGGAGTCAAAGGCGAAGGCAACATCGGCGCACTCCTCACCGATATGATCCATC
TCGCGACCTCCGACGAGATTCCCCGGCTGCAGTCGGCCATCATGTCGCACTTCCTGTTCGAATACGTCCACCCGTTCTAC
GACGGCAACGGCAGAACCGGCCGGTATCTCCTGGCCCTGTACCTGAACCATGACCTGACTATGCCCACCGTGCTATCCCT
GTCCCGCACCATCGCGGAGAACAAGAACGCCTACTACAAAGCATTCATGGAGGCGGAGGACAAGCTGAACTGCGGCGAAC
TCACGCTCTTCGTGAACACCATCCTCGGATTCATCCAACAAGCCCAGGATGAGCTGATTGACGAACTCAGTATCAAGGTC
GATCAGCTCGACAAAGGTCGGATACTCTGTACACAGCTTGAAAAGAGGCATGCCCTATCGCGCAATGCCGTCTCGGTGCT
CTATGGCGTGATTCAGGAAGAGCTGTTCGACTCGTCCAAATCCATGTCGTTGGACGAAGTGGCCCATCACATCGGACTAT
CCAAACAGAGCGCAAGGAAATACGTGGAAGAGCTCTTGGCCGCGGGGCTGGTCGTACAGACCGGAAAACGTCCGCTGAAA
ATACAGGTGGCGAAATCATTGAGGAATGTTCTCGCCACAGGAGCCGACGAGAACGCGGAAGCCTAA

Upstream 100 bases:

>100_bases
TTGTATTATCCATGATTTTATAGTTGTTTATTGACTCATTTCCTTCTCTATCTTATACTTTTTATAATTAAGGATGCTCT
TTGGGAAGTGAGTCTCTCTC

Downstream 100 bases:

>100_bases
ATGAAGAAAGGTGGACGCAAACATCTCAACGAGGCCCATACTACGTGGAAAAGTCCGGGCAGCCAACACTGCTCGGACCT
CTCTTTCATCGCTTTCCTCA

Product: filamentation induced by cAMP protein Fic

Products: NA

Alternate protein names: Fic Family Protein; Bacterial Regulatory Protein; Fic Protein; Transcriptional Regulator Fis Family; Regulatory Protein; Fic Protein Family Phage Protein; Fic Protein Family Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLLMENILLAERRISRLWNLIPG
VMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADKARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIY
DQVVLDEIDESDQPDGDLFRKGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY
DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNTILGFIQQAQDELIDELSIKV
DQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSKSMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLK
IQVAKSLRNVLATGADENAEA

Sequences:

>Translated_421_residues
MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLLMENILLAERRISRLWNLIPG
VMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADKARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIY
DQVVLDEIDESDQPDGDLFRKGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY
DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNTILGFIQQAQDELIDELSIKV
DQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSKSMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLK
IQVAKSLRNVLATGADENAEA
>Mature_421_residues
MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLLMENILLAERRISRLWNLIPG
VMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADKARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIY
DQVVLDEIDESDQPDGDLFRKGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY
DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNTILGFIQQAQDELIDELSIKV
DQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSKSMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLK
IQVAKSLRNVLATGADENAEA

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47216; Mature: 47216

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLL
CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHHHHH
MENILLAERRISRLWNLIPGVMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIYDQVVLDEIDESDQPDGDLFR
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE
KGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY
CCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNT
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
ILGFIQQAQDELIDELSIKVDQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLKIQVAKSLRNVLATGADENAE
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCC
A
C
>Mature Secondary Structure
MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLL
CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHHHHH
MENILLAERRISRLWNLIPGVMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIYDQVVLDEIDESDQPDGDLFR
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE
KGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY
CCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNT
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
ILGFIQQAQDELIDELSIKVDQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLKIQVAKSLRNVLATGADENAE
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA