Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692548

Identifier: 213692548

GI number: 213692548

Start: 1832765

End: 1833379

Strand: Reverse

Name: 213692548

Synonym: Blon_1680

Alternate gene names: NA

Gene position: 1833379-1832765 (Counterclockwise)

Preceding gene: 213692549

Following gene: 213692545

Centisome position: 64.72

GC content: 66.34

Gene sequence:

>615_bases
ATGGCCGATGAGAACGAGCAGCAGACCGCATGCAAGGCAGGACGCGACGAGCAGCATTGCAAGTGCAAGCAGCGTAGGGA
AGCCGCCGCGGCAGCCGAAGCGGCTGCCGCCAACGGCGAACACCACTGCGCCTGCAAGCACGAGCACGCCGAGGGCGCGG
CCGCGGAGCCGGGCGCGAAGAAGGAGTGCCACTGCAAGCATGGCGAAGCCGCGGCCGCTGAAGCGGGTGAGGCCAAGCAC
TGCGCCTGCAAGCACGACGCCCACGACGCCGAAGGCCACGCCATTTCGACCGAGCCGCATCTTGGATTCATCGAAGACTT
GGCCTCGTTGATCGATATTCAGGAGGAGGCCACTGTCTCCCGTACGGTGCTGCGCGAGGACGGCCTGCGCGCCGTGCTGT
TCGGCTTCGACAAGGACCAGGCACTGAGCGAGCACACCGCGGCCATGCCCGTGATCATCCAGGTGCTGGAAGGCAAGCTG
CGCGTCGGCGGCGAAGGCCGTGAAGTCGAGCTTACGGCCGGCGGCATCGTCTACCTGAGCGCCCGTCTGCCGCACACCGT
CTATGCCGTCGAACCCAGCAAGATGCTGCTGCAGATGTTCGACAACCGCGGCTGA

Upstream 100 bases:

>100_bases
AGCGTAACAGCGGTGTGCCGGCCCACGATGGCCGGATAATGGGAAACGACCAAAAGCGATGACGCGTATGTGAGGTACGC
GCGACGAATAGGAGAACATC

Downstream 100 bases:

>100_bases
TTCGGTGAATGACTGGCAATCACGTATGAGAAGCTGATTGCCGTTAGACCATTCATAATGGCTTCCTTCATATGGTGTTG
GTCGTATGACCGTAATATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin Region; Cupin 2 Conserved Barrel Domain Protein

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAKKECHCKHGEAAAAEAGEAKH
CACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVSRTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKL
RVGGEGREVELTAGGIVYLSARLPHTVYAVEPSKMLLQMFDNRG

Sequences:

>Translated_204_residues
MADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAKKECHCKHGEAAAAEAGEAKH
CACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVSRTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKL
RVGGEGREVELTAGGIVYLSARLPHTVYAVEPSKMLLQMFDNRG
>Mature_203_residues
ADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAKKECHCKHGEAAAAEAGEAKHC
ACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVSRTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKLR
VGGEGREVELTAGGIVYLSARLPHTVYAVEPSKMLLQMFDNRG

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21836; Mature: 21704

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAK
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
KECHCKHGEAAAAEAGEAKHCACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVS
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH
RTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKLRVGGEGREVELTAGGIVYLS
HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHEECCCCCEEEEECCCEEEEE
ARLPHTVYAVEPSKMLLQMFDNRG
ECCCEEEEEECHHHHHHHHHHCCC
>Mature Secondary Structure 
ADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAK
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
KECHCKHGEAAAAEAGEAKHCACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVS
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH
RTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKLRVGGEGREVELTAGGIVYLS
HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHEECCCCCEEEEECCCEEEEE
ARLPHTVYAVEPSKMLLQMFDNRG
ECCCEEEEEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA