| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692541
Identifier: 213692541
GI number: 213692541
Start: 1826881
End: 1827435
Strand: Reverse
Name: 213692541
Synonym: Blon_1673
Alternate gene names: NA
Gene position: 1827435-1826881 (Counterclockwise)
Preceding gene: 213692544
Following gene: 213692540
Centisome position: 64.51
GC content: 65.77
Gene sequence:
>555_bases ATGGCAGCCAAACGACGCACGCCTGGAGCCGGAAGCGTGTTCAGGGACGCGAACGGCGTCTGGCACTTCCGCAAGGACCT CGGCAAGGACCCCGCCACCGGCAAACGCCGCATGATCCAGGCCAAGGGGCGCACCAAGGCCGAAGCCAGGGAACGTTTCG ACGCCAAGATCGCCGAGCTCGAACGCACCGGCCTCATGCCCGGCGCCAAATCCCCGTACCTCAACGACTACGTGGAACGC TGGCTGGAGGACTACCGGCTTCGCGTCAAGCCCACCACCTATCGGACGCGGGCCGGCCGCCTGCATGCCTGCTGCCAGGT CATCGGCCACGTGCGCCTCGCGGACCTGACTCCGGAGCATGTCCGCAGTTGCATGCGCGTGCTGGGGGAGCGGCTCGCCC CCTCCACGCTGAAGGACCATTTCGTCAGCCTGAAGATGGTGCTGGACGACGCCGAACTGGAGGAGCTGATACCGGTGGAC CCGTGCAGGAAGGTGCGGCCGCCGCGCGTGGAGCCGACACCGGTGTTTTTGTTCAATAGGAAGTTGAGGTTTTAG
Upstream 100 bases:
>100_bases CGGGCCGTTTGTGACACCGTTTGAGTACCTTTAGAGTACCCTTGCGGGACCGCATCCGGAGACACACTCGAAAGGGCGCT CCCGACAGAAGGGAGCCGAC
Downstream 100 bases:
>100_bases TCACGAAGGTTTTTCGGGTTTAGGCGGAAAGGCATGCCGACCACCCGTGGGCCTTAGCCTGATGGTGCTTCTAGTTCCAT TCGGGAAAGGTCCGGAAAGG
Product: prophage LambdaBa04, site-specific recombinase, phage integrase family
Products: NA
Alternate protein names: Prophage; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAAKRRTPGAGSVFRDANGVWHFRKDLGKDPATGKRRMIQAKGRTKAEARERFDAKIAELERTGLMPGAKSPYLNDYVER WLEDYRLRVKPTTYRTRAGRLHACCQVIGHVRLADLTPEHVRSCMRVLGERLAPSTLKDHFVSLKMVLDDAELEELIPVD PCRKVRPPRVEPTPVFLFNRKLRF
Sequences:
>Translated_184_residues MAAKRRTPGAGSVFRDANGVWHFRKDLGKDPATGKRRMIQAKGRTKAEARERFDAKIAELERTGLMPGAKSPYLNDYVER WLEDYRLRVKPTTYRTRAGRLHACCQVIGHVRLADLTPEHVRSCMRVLGERLAPSTLKDHFVSLKMVLDDAELEELIPVD PCRKVRPPRVEPTPVFLFNRKLRF >Mature_183_residues AAKRRTPGAGSVFRDANGVWHFRKDLGKDPATGKRRMIQAKGRTKAEARERFDAKIAELERTGLMPGAKSPYLNDYVERW LEDYRLRVKPTTYRTRAGRLHACCQVIGHVRLADLTPEHVRSCMRVLGERLAPSTLKDHFVSLKMVLDDAELEELIPVDP CRKVRPPRVEPTPVFLFNRKLRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21164; Mature: 21033
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKRRTPGAGSVFRDANGVWHFRKDLGKDPATGKRRMIQAKGRTKAEARERFDAKIAEL CCCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH ERTGLMPGAKSPYLNDYVERWLEDYRLRVKPTTYRTRAGRLHACCQVIGHVRLADLTPEH HHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHH VRSCMRVLGERLAPSTLKDHFVSLKMVLDDAELEELIPVDPCRKVRPPRVEPTPVFLFNR HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHCCCCCCCCCCEEEEECC KLRF CCCC >Mature Secondary Structure AAKRRTPGAGSVFRDANGVWHFRKDLGKDPATGKRRMIQAKGRTKAEARERFDAKIAEL CCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH ERTGLMPGAKSPYLNDYVERWLEDYRLRVKPTTYRTRAGRLHACCQVIGHVRLADLTPEH HHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHH VRSCMRVLGERLAPSTLKDHFVSLKMVLDDAELEELIPVDPCRKVRPPRVEPTPVFLFNR HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHCCCCCCCCCCEEEEECC KLRF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA