| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692529
Identifier: 213692529
GI number: 213692529
Start: 1811040
End: 1812098
Strand: Reverse
Name: 213692529
Synonym: Blon_1661
Alternate gene names: NA
Gene position: 1812098-1811040 (Counterclockwise)
Preceding gene: 213692533
Following gene: 213692528
Centisome position: 63.97
GC content: 45.51
Gene sequence:
>1059_bases ATGGTCAGAAGTACTGTTGACTACTACGCCTTTACTGTAAAAACGCGGAAAAAGAATCCAGATATTCCTCGCGACGTTCT GGATGTCGGGGGCGGATACAGTGTCTTAGCATATCTATGTTCCTATTTAGAACACGTCAAGGGTACCATTCTCAAAGATG AGAGACGGGAACGAATATATTCCGTAAGCGATTACGAAGTCCATGGACGGCTTGTGCTGATTGATGTGTTGTCCGGTCAG TACGGTGAAAGTGGCCAATTGCTGGACATACTTCGTGGCAACGTTGTTAGAGACATCAATCCCGACGAAGCCGCCGTGAA AACAGTCAGAATAGTTTTTTGCTGCCCTAGAGGTGATGATGTGAAGATGGCGATCTTTGCCGTCGAACACATGAATTCCA TTAACGGAAAATTTGTGATTGACTATTTCGCGAAGTGCTTACGTGCTTTTATCCCGGGATTGGTCGCGAAAATCGATGGG ATTCTCGAAAAGGAAGCGTGGCTGGATTCAAGTAGCCTTATTTCGATGAAAATTCCCATTAGCAGCACCGACCAACAGCT GACAGTCGATAACGGATTGGACGATGATCCCAAGGAAACGATGTATGGCCGCATGGCATTGGTTGTTCTGCCTCCGAAGG GTGTCTCTGTGCTTAATCCGAGATTCTGGCGGGCGCTGAGGAAAAAGAATATGGGAAGGGAAGGGATGCTGACAATTCCG TCATTGAATAATGAATCCATTCCCAAACAAGGAGTCCTGGTCGAGGCTGCGGGAATCGATGGTCGCAAAAAGACGTTCAC AATCGGCAATGAGAAGAGTCCGAAAATTCGTGAGGTTATTACCGGAGACGGTGAGCCACGTTTGGATAACGGACAACTAA GGCGTGTGCTTTCTGATTCTATCTTTAGCAAATATCATGATGAACAGATTCGTCTTGAAACTGGATGGGACAGTGGAGAG ATGCATGAAGAGATACCGGACTCAGAAGTTATTGACTGGAATACATTATTTGAACAGGTAAATCCGCAAAATGGTGATAG ATATGAACTTGAATCATAA
Upstream 100 bases:
>100_bases TATTTAGAACCCGGGGAAGCGCCATGATCCCCCAAACGCGTGTAGAATCTGTGGTAACAACCGCAAACTACACCGATGTC GTTCAAGCTGGGGAGCATGG
Downstream 100 bases:
>100_bases CGGCATCCTCTATCACTACATGGATACATTGGCTCCGAAGATTCGTGAATCGGACGATGGTCGAAATATTGCGTGGAAAT ACGTATTGCGGGAATTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MVRSTVDYYAFTVKTRKKNPDIPRDVLDVGGGYSVLAYLCSYLEHVKGTILKDERRERIYSVSDYEVHGRLVLIDVLSGQ YGESGQLLDILRGNVVRDINPDEAAVKTVRIVFCCPRGDDVKMAIFAVEHMNSINGKFVIDYFAKCLRAFIPGLVAKIDG ILEKEAWLDSSSLISMKIPISSTDQQLTVDNGLDDDPKETMYGRMALVVLPPKGVSVLNPRFWRALRKKNMGREGMLTIP SLNNESIPKQGVLVEAAGIDGRKKTFTIGNEKSPKIREVITGDGEPRLDNGQLRRVLSDSIFSKYHDEQIRLETGWDSGE MHEEIPDSEVIDWNTLFEQVNPQNGDRYELES
Sequences:
>Translated_352_residues MVRSTVDYYAFTVKTRKKNPDIPRDVLDVGGGYSVLAYLCSYLEHVKGTILKDERRERIYSVSDYEVHGRLVLIDVLSGQ YGESGQLLDILRGNVVRDINPDEAAVKTVRIVFCCPRGDDVKMAIFAVEHMNSINGKFVIDYFAKCLRAFIPGLVAKIDG ILEKEAWLDSSSLISMKIPISSTDQQLTVDNGLDDDPKETMYGRMALVVLPPKGVSVLNPRFWRALRKKNMGREGMLTIP SLNNESIPKQGVLVEAAGIDGRKKTFTIGNEKSPKIREVITGDGEPRLDNGQLRRVLSDSIFSKYHDEQIRLETGWDSGE MHEEIPDSEVIDWNTLFEQVNPQNGDRYELES >Mature_352_residues MVRSTVDYYAFTVKTRKKNPDIPRDVLDVGGGYSVLAYLCSYLEHVKGTILKDERRERIYSVSDYEVHGRLVLIDVLSGQ YGESGQLLDILRGNVVRDINPDEAAVKTVRIVFCCPRGDDVKMAIFAVEHMNSINGKFVIDYFAKCLRAFIPGLVAKIDG ILEKEAWLDSSSLISMKIPISSTDQQLTVDNGLDDDPKETMYGRMALVVLPPKGVSVLNPRFWRALRKKNMGREGMLTIP SLNNESIPKQGVLVEAAGIDGRKKTFTIGNEKSPKIREVITGDGEPRLDNGQLRRVLSDSIFSKYHDEQIRLETGWDSGE MHEEIPDSEVIDWNTLFEQVNPQNGDRYELES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39646; Mature: 39646
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSTVDYYAFTVKTRKKNPDIPRDVLDVGGGYSVLAYLCSYLEHVKGTILKDERRERIY CCCCEEEEEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHC SVSDYEVHGRLVLIDVLSGQYGESGQLLDILRGNVVRDINPDEAAVKTVRIVFCCPRGDD CCCCEEECCEEEEEEEECCCCCCCCCCHHHHCCCEEECCCCCHHHEEEEEEEEECCCCCC VKMAIFAVEHMNSINGKFVIDYFAKCLRAFIPGLVAKIDGILEKEAWLDSSSLISMKIPI CEEEEEEEEHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC SSTDQQLTVDNGLDDDPKETMYGRMALVVLPPKGVSVLNPRFWRALRKKNMGREGMLTIP CCCCCEEEECCCCCCCHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECC SLNNESIPKQGVLVEAAGIDGRKKTFTIGNEKSPKIREVITGDGEPRLDNGQLRRVLSDS CCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH IFSKYHDEQIRLETGWDSGEMHEEIPDSEVIDWNTLFEQVNPQNGDRYELES HHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEHHHHHHHCCCCCCCEECCCC >Mature Secondary Structure MVRSTVDYYAFTVKTRKKNPDIPRDVLDVGGGYSVLAYLCSYLEHVKGTILKDERRERIY CCCCEEEEEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHC SVSDYEVHGRLVLIDVLSGQYGESGQLLDILRGNVVRDINPDEAAVKTVRIVFCCPRGDD CCCCEEECCEEEEEEEECCCCCCCCCCHHHHCCCEEECCCCCHHHEEEEEEEEECCCCCC VKMAIFAVEHMNSINGKFVIDYFAKCLRAFIPGLVAKIDGILEKEAWLDSSSLISMKIPI CEEEEEEEEHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC SSTDQQLTVDNGLDDDPKETMYGRMALVVLPPKGVSVLNPRFWRALRKKNMGREGMLTIP CCCCCEEEECCCCCCCHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECC SLNNESIPKQGVLVEAAGIDGRKKTFTIGNEKSPKIREVITGDGEPRLDNGQLRRVLSDS CCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH IFSKYHDEQIRLETGWDSGEMHEEIPDSEVIDWNTLFEQVNPQNGDRYELES HHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEHHHHHHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA