| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692528
Identifier: 213692528
GI number: 213692528
Start: 1810496
End: 1811020
Strand: Reverse
Name: 213692528
Synonym: Blon_1660
Alternate gene names: NA
Gene position: 1811020-1810496 (Counterclockwise)
Preceding gene: 213692529
Following gene: 213692527
Centisome position: 63.93
GC content: 40.76
Gene sequence:
>525_bases ATGGATACATTGGCTCCGAAGATTCGTGAATCGGACGATGGTCGAAATATTGCGTGGAAATACGTATTGCGGGAATTATT GTGTCCGACGATTGTCGCAATATTGGATTTTTGTTTTGGACGGTTTGCGGTAAACGCCGATATTATCGTATCGGCTTTAG GTGTCCTCGGAGGTTTATTGTTCGCACACGCTATCTTCGTATTTGAACTTAGAATGACATATAATCAAAATTTGCGAGAA CGCGTGAAAAATGGAGAAATTCAAGCTGAGAATTTAAAACTTACACGACTCGTGGATGACATGTTCTTCAGCGTCGTATA CTCGTCGGCTCTTGCTCTCGGAATAACTATATTGACCTCTATGGGGTCTTCCCTTGGGATATATGGTCAATTACCTGATA TAGGGAAAAAAGTAGTTTCAGCGATTGTTGTATGGCTAATGACTCATTTAGCGTTCTGCATATATCGGGTACTGAAGATA ACGACAAGTGCGTATGGAGAATTACGAAAGAAACGTATCTCATAA
Upstream 100 bases:
>100_bases GACTCAGAAGTTATTGACTGGAATACATTATTTGAACAGGTAAATCCGCAAAATGGTGATAGATATGAACTTGAATCATA ACGGCATCCTCTATCACTAC
Downstream 100 bases:
>100_bases GTTCAGCCCCACCTTTGGTGCGGGGCTTTCGCATATCTAGGGGGAGGTGCATGATGCCGCCCACCATCACGCTCAAGATC ACCGACAACGCGGACCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MDTLAPKIRESDDGRNIAWKYVLRELLCPTIVAILDFCFGRFAVNADIIVSALGVLGGLLFAHAIFVFELRMTYNQNLRE RVKNGEIQAENLKLTRLVDDMFFSVVYSSALALGITILTSMGSSLGIYGQLPDIGKKVVSAIVVWLMTHLAFCIYRVLKI TTSAYGELRKKRIS
Sequences:
>Translated_174_residues MDTLAPKIRESDDGRNIAWKYVLRELLCPTIVAILDFCFGRFAVNADIIVSALGVLGGLLFAHAIFVFELRMTYNQNLRE RVKNGEIQAENLKLTRLVDDMFFSVVYSSALALGITILTSMGSSLGIYGQLPDIGKKVVSAIVVWLMTHLAFCIYRVLKI TTSAYGELRKKRIS >Mature_174_residues MDTLAPKIRESDDGRNIAWKYVLRELLCPTIVAILDFCFGRFAVNADIIVSALGVLGGLLFAHAIFVFELRMTYNQNLRE RVKNGEIQAENLKLTRLVDDMFFSVVYSSALALGITILTSMGSSLGIYGQLPDIGKKVVSAIVVWLMTHLAFCIYRVLKI TTSAYGELRKKRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19438; Mature: 19438
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLAPKIRESDDGRNIAWKYVLRELLCPTIVAILDFCFGRFAVNADIIVSALGVLGGLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHAIFVFELRMTYNQNLRERVKNGEIQAENLKLTRLVDDMFFSVVYSSALALGITILTS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGSSLGIYGQLPDIGKKVVSAIVVWLMTHLAFCIYRVLKITTSAYGELRKKRIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTLAPKIRESDDGRNIAWKYVLRELLCPTIVAILDFCFGRFAVNADIIVSALGVLGGLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHAIFVFELRMTYNQNLRERVKNGEIQAENLKLTRLVDDMFFSVVYSSALALGITILTS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGSSLGIYGQLPDIGKKVVSAIVVWLMTHLAFCIYRVLKITTSAYGELRKKRIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA